miRNEST 2.0, an integrative microRNA resource :: BLAST
>40271_bna-MIR168:mirbase
Length = 133
Score = 218 bits (110), Expect = 9e-58
Identities = 125/130 (96%)
Strand = Plus / Plus
Query: 10 cggcggcctctgattcgcttggtgcaggtcgggaactgattggctgacacagccacgtgg 69
||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4 cggcggcctctgactcgcttggtgcaggtcgggaactgattggctgacaccgccacgtgg 63
Query: 70 gttttcatggttggctcgtgagcagggatcggatcccgccttgtatcaagtgaatccgag 129
||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ctttccatggttggcttgtgagcagggatcggatcccgccttgtatcaagtgaatccgag 123
Query: 130 tccgacgtga 139
||||||||||
Sbjct: 124 tccgacgtga 133
>40044_ath-MIR168b:mirbase
Length = 124
Score = 93.7 bits (47), Expect = 3e-20
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 10 cggcggcctctgattcgcttggtgcaggtcgggaactgattggctgacacagccacgtgg 69
|||||| ||| ||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 5 cggcggtctcggattcgcttggtgcaggtcgggaactgattggctgacaccgacacgtgt 64
Query: 70 gttttcatggttggctcgtgagc 92
|| |||||||||| | ||||||
Sbjct: 65 cttgtcatggttggtttgtgagc 87
>41101_tcc-MIR168:mirbase
Length = 167
Score = 75.8 bits (38), Expect = 8e-15
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 10 cggcggcctctgattcgcttggtgcaggtcgggaactgattggctg 55
|||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaactgattggctg 52
>39833_aly-MIR168b:mirbase
Length = 176
Score = 75.8 bits (38), Expect = 8e-15
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 10 cggcggcctctgattcgcttggtgcaggtcgggaactgattggctgacacagccacgtgg 69
|||||| ||| |||||||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 29 cggcggtctcggattcgcttggtgcaggtcgggaactgattagctgacaattacacgtgt 88
Query: 70 gttttcatggttgg 83
||| ||||||||||
Sbjct: 89 gttgtcatggttgg 102
>41215_crt-MIR168:mirbase
Length = 201
Score = 73.8 bits (37), Expect = 3e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 10 cggcggcctctgattcgcttggtgcaggtcgggaactgattggct 54
|||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 7 cggcggtctctaattcgcttggtgcaggtcgggaactgattggct 51
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 100 ggatcccgccttgtatcaagtgaatccgagtccgacgtgaaagat 144
||||||||||||| ||||| |||||| ||| |||| |||| ||||
Sbjct: 139 ggatcccgccttgcatcaactgaatcggagaccgaggtgagagat 183
>41210_ccl-MIR168:mirbase
Length = 176
Score = 73.8 bits (37), Expect = 3e-14
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 10 cggcggcctctgattcgcttggtgcaggtcgggaactgattggct 54
|||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 6 cggcggtctctaattcgcttggtgcaggtcgggaactgattggct 50
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 17 ctctgattcgcttggtgcaggtcgggaactgatt 50
||||||||||||||||||||||||||||||||||
Sbjct: 4 ctctgattcgcttggtgcaggtcgggaactgatt 37
>40355_rco-MIR168:mirbase
Length = 131
Score = 65.9 bits (33), Expect = 8e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 22 attcgcttggtgcaggtcgggaactgattggct 54
|||||||||||||||||||||||||||||||||
Sbjct: 4 attcgcttggtgcaggtcgggaactgattggct 36
>40043_ath-MIR168a:mirbase
Length = 138
Score = 65.9 bits (33), Expect = 8e-12
Identities = 92/110 (83%), Gaps = 5/110 (4%)
Strand = Plus / Plus
Query: 21 gattcgcttggtgcaggtcgggaactgatt-ggctgacacagccacgtgggtttt----c 75
||||||||||||||||||||||||| ||| ||||||||||||| |||| |||| |
Sbjct: 15 gattcgcttggtgcaggtcgggaaccaattcggctgacacagcctcgtgacttttaaacc 74
Query: 76 atggttggctcgtgagcagggatcggatcccgccttgtatcaagtgaatc 125
| |||| | |||||||||||| ||||||||||||| ||||| ||||||
Sbjct: 75 tttattggtttgtgagcagggattggatcccgccttgcatcaactgaatc 124
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 17 ctctgattcgcttggtgcaggtcgggaactgatt 50
|||| |||||||||||||||||||||||||||||
Sbjct: 4 ctctaattcgcttggtgcaggtcgggaactgatt 37
>39832_aly-MIR168a:mirbase
Length = 155
Score = 58.0 bits (29), Expect = 2e-09
Identities = 45/49 (91%), Gaps = 1/49 (2%)
Strand = Plus / Plus
Query: 21 gattcgcttggtgcaggtcgggaactgatt-ggctgacacagccacgtg 68
||||||||||||||||||||||||| ||| ||||||||||||| ||||
Sbjct: 21 gattcgcttggtgcaggtcgggaaccaattcggctgacacagcctcgtg 69
>40448_gma-MIR168:mirbase
Length = 125
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 12 gcggcctctgattcgcttggtgcaggtcgggaac 45
|||| |||| ||||||||||||||||||||||||
Sbjct: 7 gcggtctctaattcgcttggtgcaggtcgggaac 40
>41596_vvi-MIR168:mirbase
Length = 132
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 17 ctctgattcgcttggtgcaggtcgggaac 45
|||| ||||||||||||||||||||||||
Sbjct: 4 ctctaattcgcttggtgcaggtcgggaac 32
>42742_zma-MIR168b:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 99 cggatcccgccttgtatcaagtgaatc 125
|||||||||||||| ||||||||||||
Sbjct: 62 cggatcccgccttgcatcaagtgaatc 88
>42528_sbi-MIR168:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 101 gatcccgccttgtatcaagtgaatccgag 129
|||||||||||| | ||||||||||||||
Sbjct: 66 gatcccgccttgcaccaagtgaatccgag 94
