miRNEST 2.0, an integrative microRNA resource :: BLAST
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 75.8 bits (38), Expect = 7e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 4 aaagtcactggaggcagcggttcatcgatctcttcctg 41
||||||||||||||||||||||||||||||||||||||
Sbjct: 6 aaagtcactggaggcagcggttcatcgatctcttcctg 43
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 98 gatcgataaacctctgcatccagcg 122
|||||||||||||||||||||||||
Sbjct: 78 gatcgataaacctctgcatccagcg 102
>41090_tcc-MIR162:mirbase
Length = 131
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 4 aaagtcactggaggcagcggttcatcgatctcttcctg 41
|||| |||||||||||||||||||||||||||||||||
Sbjct: 14 aaagacactggaggcagcggttcatcgatctcttcctg 51
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 98 gatcgataaacctctgcatccag 120
|||||||||||||||||||||||
Sbjct: 89 gatcgataaacctctgcatccag 111
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 4 aaagtcactggaggcagcggttcatcgatctcttcctg 41
|||| |||||||||||||||||||||||||||||||||
Sbjct: 17 aaagacactggaggcagcggttcatcgatctcttcctg 54
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 98 gatcgataaacctctgcatccagcg 122
|||||||||||||||||||||||||
Sbjct: 92 gatcgataaacctctgcatccagcg 116
>40342_rco-MIR162:mirbase
Length = 101
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 8 tcactggaggcagcggttcatcgatctcttcctg 41
||||||||||||||||||||||||||||||||||
Sbjct: 1 tcactggaggcagcggttcatcgatctcttcctg 34
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 98 gatcgataaacctctgcatccagcg 122
|||||||||||||||||||||||||
Sbjct: 74 gatcgataaacctctgcatccagcg 98
>40024_ath-MIR162a:mirbase
Length = 140
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 6 agtcactggaggcagcggttcatcgatctcttcctgtg 43
|||| |||||||||||||||||||||||||||||||||
Sbjct: 20 agtcgctggaggcagcggttcatcgatctcttcctgtg 57
Score = 67.9 bits (34), Expect = 2e-12
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 84 taaaagcacgaacagatcgataaacctctgcatccagcggttgcct 129
|||||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 73 taaaagcatgaatagatcgataaacctctgcatccagcgtttgcct 118
>41578_vvi-MIR162:mirbase
Length = 103
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 5 aagtcactggaggcagcggttcatcgatctcttcctg 41
||||||||||| |||||||||||||||||||||||||
Sbjct: 3 aagtcactggatgcagcggttcatcgatctcttcctg 39
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tcgataaacctctgcatccagcg 122
|||||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatccagcg 95
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 65.9 bits (33), Expect = 7e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 9 cactggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||||
Sbjct: 9 cactggaggcagcggttcatcgatctcttcctg 41
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 93 gaacagatcgataaacctctgcatccagcg 122
|||| |||||||||||||||||||||||||
Sbjct: 71 gaaccgatcgataaacctctgcatccagcg 100
>40437_gma-MIR162:mirbase
Length = 102
Score = 65.9 bits (33), Expect = 7e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 5 aagtcactggaggcagcggttcatcgatctcttcctg 41
||||||||||| |||||||||||||||||||||||||
Sbjct: 4 aagtcactggatgcagcggttcatcgatctcttcctg 40
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 98 gatcgataaacctctgcatccagcg 122
|||||||||||||||||||||||||
Sbjct: 71 gatcgataaacctctgcatccagcg 95
>39812_aly-MIR162a:mirbase
Length = 228
Score = 65.9 bits (33), Expect = 7e-12
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 85 aaaagcacgaacagatcgataaacctctgcatccagcggttgcct 129
||||||| ||| |||||||||||||||||||||||||| ||||||
Sbjct: 121 aaaagcatgaatagatcgataaacctctgcatccagcgtttgcct 165
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 6 agtcactggaggcagcggttcatcgatctcttcctg 41
|||| |||||||||||||||||||||||||||||||
Sbjct: 63 agtcgctggaggcagcggttcatcgatctcttcctg 98
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 cactggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||| ||||||
Sbjct: 9 cactggaggcagcggttcatcgatcttttcctg 41
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 90 cacgaacagatcgataaacctctgcatccag 120
||||||| |||||||||||||||||||||||
Sbjct: 68 cacgaaccgatcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 9 cactggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||| ||||||
Sbjct: 9 cactggaggcagcggttcatcgatcttttcctg 41
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 90 cacgaacagatcgataaacctctgcatccag 120
||||||| |||||||||||||||||||||||
Sbjct: 68 cacgaaccgatcgataaacctctgcatccag 98
>41220_csi-MIR162:mirbase
Length = 201
Score = 58.0 bits (29), Expect = 2e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 5 aagtcactggaggcagcggttcatcgatc 33
|||||||||||||||||||||||||||||
Sbjct: 83 aagtcactggaggcagcggttcatcgatc 111
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 98 gatcgataaacctctgcatccagcg 122
|||||||||||||||||||||||||
Sbjct: 159 gatcgataaacctctgcatccagcg 183
>40663_mtr-MIR162:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 7 gtcactggaggcagcggttcatcgatctcttcctg 41
||||||||| |||||||||||||||||| ||||||
Sbjct: 17 gtcactggatgcagcggttcatcgatctgttcctg 51
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 100 tcgataaacctctgcatccagcg 122
|||||||||||||||||||||||
Sbjct: 87 tcgataaacctctgcatccagcg 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 93 gaacagatcgataaacctctgcatccag 120
|||||||||||| |||| ||||||||||
Sbjct: 48 gaacagatcgatgaaccgctgcatccag 21
>40025_ath-MIR162b:mirbase
Length = 111
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 5 aagtcactggaggcagcggttcatcgatctcttcctgtg 43
||||| ||||||||||||||||||||||| ||||||||
Sbjct: 6 aagtcgctggaggcagcggttcatcgatcaattcctgtg 44
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 85 aaaagcacgaacagatcgataaacctctgcatccagcg 122
||||||| ||| |||||||||||||||||||||||||
Sbjct: 64 aaaagcaagaatcgatcgataaacctctgcatccagcg 101
>39813_aly-MIR162b:mirbase
Length = 184
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 5 aagtcactggaggcagcggttcatcgatctcttcctgtg 43
||||| ||||||||||||||||||||||| ||||||||
Sbjct: 44 aagtcgctggaggcagcggttcatcgatcaattcctgtg 82
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 85 aaaagcacgaacagatcgataaacctctgcatccagcg 122
||||||| ||| |||||||||||||||||||||||||
Sbjct: 98 aaaagcatgaatcgatcgataaacctctgcatccagcg 135
>42502_sbi-MIR162:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 98 gatcgataaacctctgcatccag 120
|||||||||||||||||||||||
Sbjct: 105 gatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 98 gatcgataaacctctgcatccag 120
|||||||||||||||||||||||
Sbjct: 141 gatcgataaacctctgcatccag 163
>42708_zma-MIR162:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 100 tcgataaacctctgcatccag 120
|||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130
>41736_bdi-MIR162:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 98 gatcgataaacctctgcatcc 118
|||||||||||||||||||||
Sbjct: 109 gatcgataaacctctgcatcc 129
>41530_sly-MIR162:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 100 tcgataaacctctgcatccag 120
|||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99
