miRNEST 2.0, an integrative microRNA resource :: BLAST
>40043_ath-MIR168a:mirbase
Length = 138
Score = 71.9 bits (36), Expect = 1e-13
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 90 ttattggtttgtaagtagggattggctcccgccttacatcaactgaatcgga 141
|||||||||||| || ||||||||| ||||||||| ||||||||||||||||
Sbjct: 76 ttattggtttgtgagcagggattggatcccgccttgcatcaactgaatcgga 127
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 21 atcgggctcggattcgcttgatgcaggtcgg 51
|||||||||||||||||||| ||||||||||
Sbjct: 5 atcgggctcggattcgcttggtgcaggtcgg 35
>39832_aly-MIR168a:mirbase
Length = 155
Score = 71.9 bits (36), Expect = 1e-13
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 90 ttattggtttgtaagtagggattggctcccgccttacatcaactgaatcgga 141
|||||||||||| || ||||||||| ||||||||| ||||||||||||||||
Sbjct: 82 ttattggtttgtgagcagggattggatcccgccttgcatcaactgaatcgga 133
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 22 tcgggctcggattcgcttgatgcaggtcgg 51
||||||||||||||||||| ||||||||||
Sbjct: 12 tcgggctcggattcgcttggtgcaggtcgg 41
>40044_ath-MIR168b:mirbase
Length = 124
Score = 61.9 bits (31), Expect = 1e-10
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 27 ctcggattcgcttgatgcaggtc-ggaactgattggctgacac 68
|||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 12 ctcggattcgcttggtgcaggtcgggaactgattggctgacac 54
>39833_aly-MIR168b:mirbase
Length = 176
Score = 52.0 bits (26), Expect = 1e-07
Identities = 39/42 (92%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 27 ctcggattcgcttgatgcaggtc-ggaactgattggctgaca 67
|||||||||||||| |||||||| |||||||||| |||||||
Sbjct: 36 ctcggattcgcttggtgcaggtcgggaactgattagctgaca 77
>41348_ptc-MIR168b:mirbase
Length = 136
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 110 attggctcccgccttacatcaactgaatcggag 142
||||| ||||||||| |||||||||||||||||
Sbjct: 103 attggatcccgccttgcatcaactgaatcggag 135
>41347_ptc-MIR168a:mirbase
Length = 160
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 110 attggctcccgccttacatcaactgaatcggag 142
||||| ||||||||| |||||||||||||||||
Sbjct: 127 attggatcccgccttgcatcaactgaatcggag 159
>41215_crt-MIR168:mirbase
Length = 201
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 110 attggctcccgccttacatcaactgaatcggag 142
||||| ||||||||| |||||||||||||||||
Sbjct: 136 attggatcccgccttgcatcaactgaatcggag 168
Score = 42.1 bits (21), Expect = 1e-04
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 32 attcgcttgatgcaggtcgg-aactgattggct 63
||||||||| |||||||||| ||||||||||||
Sbjct: 19 attcgcttggtgcaggtcgggaactgattggct 51
>41210_ccl-MIR168:mirbase
Length = 176
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 110 attggctcccgccttacatcaactgaatcggag 142
||||| ||||||||| |||||||||||||||||
Sbjct: 135 attggatcccgccttgcatcaactgaatcggag 167
Score = 42.1 bits (21), Expect = 1e-04
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 32 attcgcttgatgcaggtcgg-aactgattggct 63
||||||||| |||||||||| ||||||||||||
Sbjct: 18 attcgcttggtgcaggtcgggaactgattggct 50
>41101_tcc-MIR168:mirbase
Length = 167
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 110 attggctcccgccttacatcaactgaatcggag 142
||||| ||||||||| |||||||||||||||||
Sbjct: 120 attggatcccgccttgcatcaactgaatcggag 152
Score = 44.1 bits (22), Expect = 3e-05
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Strand = Plus / Plus
Query: 32 attcgcttgatgcaggtcgg-aactgattggctg 64
||||||||| |||||||||| |||||||||||||
Sbjct: 19 attcgcttggtgcaggtcgggaactgattggctg 52
>40448_gma-MIR168:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 5e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 110 attggctcccgccttacatcaactgaatcggag 142
||||| ||||||||| |||||||||||||||||
Sbjct: 81 attggatcccgccttgcatcaactgaatcggag 113
>40271_bna-MIR168:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 34 tcgcttgatgcaggtcgg-aactgattggctgacac 68
||||||| |||||||||| |||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaactgattggctgacac 53
>41596_vvi-MIR168:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 8e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 116 tcccgccttacatcaactgaatcggag 142
||||||||| |||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcggag 127
>40355_rco-MIR168:mirbase
Length = 131
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 110 attggctcccgccttacatcaactgaatcg 139
||||| ||||||||| ||||||||||||||
Sbjct: 99 attggatcccgccttgcatcaactgaatcg 128
Score = 42.1 bits (21), Expect = 1e-04
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 32 attcgcttgatgcaggtcgg-aactgattggct 63
||||||||| |||||||||| ||||||||||||
Sbjct: 4 attcgcttggtgcaggtcgggaactgattggct 36
>42742_zma-MIR168b:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 116 tcccgccttacatcaactgaatcggagcc 144
||||||||| |||||| ||||||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcggagcc 94
