miRNEST 2.0, an integrative microRNA resource :: BLAST
>40311_bra-MIR159a:mirbase
Length = 185
Score = 280 bits (141), Expect = 4e-76
Identities = 174/185 (94%)
Strand = Plus / Plus
Query: 9 aagtagggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagct 68
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 aagtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagct 60
Query: 69 atggataccataagccctaatccttgtattgaaaaaggacttggtaatatggcttgcata 128
||| || |||||||||||||||||| ||| |||||||| ||||| ||||||||| ||||
Sbjct: 61 atgaatcccataagccctaatccttatatataaaaaggatttggttatatggcttacata 120
Query: 129 tctcaggagctttaacttaccctttaattgcttttacccttctttggattgaagggagct 188
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 tctcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagct 180
Query: 189 ctaca 193
|||||
Sbjct: 181 ctaca 185
>40261_bna-MIR159:mirbase
Length = 183
Score = 276 bits (139), Expect = 6e-75
Identities = 172/183 (93%)
Strand = Plus / Plus
Query: 11 gtagggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctat 70
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 gtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 60
Query: 71 ggataccataagccctaatccttgtattgaaaaaggacttggtaatatggcttgcatatc 130
| || |||||||||||||||||| ||| |||||||| ||||| ||||||||| ||||||
Sbjct: 61 gaatcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatc 120
Query: 131 tcaggagctttaacttaccctttaattgcttttacccttctttggattgaagggagctct 190
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 121 tcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 180
Query: 191 aca 193
|||
Sbjct: 181 aca 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 256 bits (129), Expect = 6e-69
Identities = 182/199 (91%), Gaps = 3/199 (1%)
Strand = Plus / Plus
Query: 6 tggaagtagggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaa 65
||||||||| ||||||| |||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 15 tggaagtagagctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaa 74
Query: 66 gctatggataccataagccctaatccttgtattg---aaaaaggacttggtaatatggct 122
||||||||| |||||||||||||||||| || | |||||||| ||||| ||||||||
Sbjct: 75 gctatggatcccataagccctaatccttataaagaaaaaaaaggatttggttatatggct 134
Query: 123 tgcatatctcaggagctttaacttaccctttaattgcttttacccttctttggattgaag 182
|||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||
Sbjct: 135 tgcatatctcaggagctttaacttgccctttaatggcttttactcttctttggattgaag 194
Query: 183 ggagctctacatcttcttt 201
|||||||||||||||||||
Sbjct: 195 ggagctctacatcttcttt 213
>40016_ath-MIR159a:mirbase
Length = 184
Score = 224 bits (113), Expect = 2e-59
Identities = 167/184 (90%), Gaps = 2/184 (1%)
Strand = Plus / Plus
Query: 11 gtagggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctat 70
|||| |||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||
Sbjct: 1 gtagagctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctat 60
Query: 71 ggataccataagccctaatccttgtattg--aaaaaggacttggtaatatggcttgcata 128
|||| ||||||||||||||||||||| | |||||||| ||||| |||||| |||||||
Sbjct: 61 ggatcccataagccctaatccttgtaaagtaaaaaaggatttggttatatggattgcata 120
Query: 129 tctcaggagctttaacttaccctttaattgcttttacccttctttggattgaagggagct 188
|||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 121 tctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagct 180
Query: 189 ctac 192
||||
Sbjct: 181 ctac 184
>39805_aly-MIR159b:mirbase
Length = 202
Score = 75.8 bits (38), Expect = 1e-14
Identities = 73/82 (89%), Gaps = 2/82 (2%)
Strand = Plus / Plus
Query: 116 tatggcttgcatatctcaggagctttaacttaccc-tttaattgcttttacccttctttg 174
||||| || ||||||||||||||||| |||||||| |||||| |||| || ||||||||
Sbjct: 114 tatggattccatatctcaggagctttcacttacccctttaatggcttc-actcttctttg 172
Query: 175 gattgaagggagctctacatct 196
|||||||||||||||| |||||
Sbjct: 173 gattgaagggagctcttcatct 194
Score = 67.9 bits (34), Expect = 3e-12
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 16 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 75
||||||| ||||||| ||| ||||||| |||||||| ||||||||||||||||||||
Sbjct: 19 gctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatggatc 78
Query: 76 ccataa 81
||||||
Sbjct: 79 ccataa 84
>40017_ath-MIR159b:mirbase
Length = 196
Score = 73.8 bits (37), Expect = 5e-14
Identities = 66/73 (90%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 125 catatctcaggagctttaacttaccc-tttaattgcttttacccttctttggattgaagg 183
||||||||||||||||| |||||||| |||||| |||| || |||||||||||||||||
Sbjct: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
Query: 184 gagctctacatct 196
||||||| |||||
Sbjct: 181 gagctcttcatct 193
Score = 65.9 bits (33), Expect = 1e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 16 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 75
||||||| ||||||| ||| ||||||| |||| ||| ||||||||||||||||||||
Sbjct: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
Query: 76 ccataagcc 84
|||||||||
Sbjct: 67 ccataagcc 75
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 60.0 bits (30), Expect = 7e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctctacatctt 197
||||||||||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctctacatctt 178
>40432_gma-MIR159a:mirbase
Length = 214
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 166 ccttctttggattgaagggagctctaca 193
||||||||||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctaca 197
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 166 ccttctttggattgaagggagctctac 192
|||||||||||||||||||||||||||
Sbjct: 148 ccttctttggattgaagggagctctac 174
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 166 ccttctttggattgaagggagctctac 192
|||||||||||||||||||||||||||
Sbjct: 148 ccttctttggattgaagggagctctac 174
>40338_rco-MIR159:mirbase
Length = 180
Score = 54.0 bits (27), Expect = 4e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 166 ccttctttggattgaagggagctctacatct 196
|||| ||||||||||||||||||||||||||
Sbjct: 150 ccttgtttggattgaagggagctctacatct 180
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 118 tggcttgcatatctcaggagctt 140
|||||||||||||||||||||||
Sbjct: 109 tggcttgcatatctcaggagctt 131
>41918_osa-MIR159b:mirbase
Length = 188
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatctt 197
|||||||||||||||||||||| ||||||
Sbjct: 156 tctttggattgaagggagctctgcatctt 184
>41917_osa-MIR159a:mirbase
Length = 272
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatctt 197
|||||||||||||||||||||| ||||||
Sbjct: 240 tctttggattgaagggagctctgcatctt 268
>41916_osa-MIR159a:mirbase
Length = 272
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatctt 197
|||||||||||||||||||||| ||||||
Sbjct: 240 tctttggattgaagggagctctgcatctt 268
>41868_far-MIR159:mirbase
Length = 200
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatctt 197
|||||||||||||||||||||| ||||||
Sbjct: 167 tctttggattgaagggagctctgcatctt 195
>40397_ahy-MIR159:mirbase
Length = 197
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 166 ccttctttggattgaagggagctctacat 194
|||| ||||||||||||||||||||||||
Sbjct: 152 ccttatttggattgaagggagctctacat 180
>42635_tae-MIR159b:mirbase
Length = 255
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatct 196
|||||||||||||||||||||| |||||
Sbjct: 228 tctttggattgaagggagctctgcatct 255
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 166 ccttctttggattgaagggagctctaca 193
|||| |||||||||||||||||||||||
Sbjct: 155 ccttgtttggattgaagggagctctaca 182
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 tggcttgcatatctcaggagct 139
||||||||||||||||||||||
Sbjct: 114 tggcttgcatatctcaggagct 135
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 ggcttgcatatctcaggagcttta 142
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctcta 191
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 ggcttgcatatctcaggagcttta 142
||||||||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctcta 191
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 ggcttgcatatctcaggagcttta 142
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctcta 191
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>42691_zma-MIR159b:mirbase
Length = 221
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctacatctt 197
|||||||||||||||||||| ||||||
Sbjct: 182 tttggattgaagggagctctgcatctt 208
>42690_zma-MIR159a:mirbase
Length = 246
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatc 195
|||||||||||||||||||||| ||||
Sbjct: 205 tctttggattgaagggagctctgcatc 231
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatc 195
|||||||||||||||||||||| ||||
Sbjct: 221 tctttggattgaagggagctctgcatc 247
>42455_sof-MIR159d:mirbase
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatc 195
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>42453_sof-MIR159b:mirbase
Length = 266
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatc 195
|||||||||||||||||||||| ||||
Sbjct: 225 tctttggattgaagggagctctgcatc 251
>42452_sof-MIR159a:mirbase
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatc 195
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctacatctt 197
|||||||||||||||||||| ||||||
Sbjct: 11 tttggattgaagggagctctgcatctt 37
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>41922_osa-MIR159f:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 ttggattgaagggagctctaca 193
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
>41218_csi-MIR159:mirbase
Length = 216
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctac 192
||||||||||||||||||||||
Sbjct: 186 tttggattgaagggagctctac 207
