miRNEST 2.0, an integrative microRNA resource :: BLAST
>48395_bra-miR159a:pmrd
Length = 185
Score = 280 bits (141), Expect = 4e-76
Identities = 174/185 (94%)
Strand = Plus / Plus
Query: 9 aagtagggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagct 68
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1 aagtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagct 60
Query: 69 atggataccataagccctaatccttgtattgaaaaaggacttggtaatatggcttgcata 128
||| || |||||||||||||||||| ||| |||||||| ||||| ||||||||| ||||
Sbjct: 61 atgaatcccataagccctaatccttatatataaaaaggatttggttatatggcttacata 120
Query: 129 tctcaggagctttaacttaccctttaattgcttttacccttctttggattgaagggagct 188
|||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 121 tctcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagct 180
Query: 189 ctaca 193
|||||
Sbjct: 181 ctaca 185
>48339_bna-miR159:pmrd
Length = 183
Score = 276 bits (139), Expect = 6e-75
Identities = 172/183 (93%)
Strand = Plus / Plus
Query: 11 gtagggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctat 70
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 gtagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctat 60
Query: 71 ggataccataagccctaatccttgtattgaaaaaggacttggtaatatggcttgcatatc 130
| || |||||||||||||||||| ||| |||||||| ||||| ||||||||| ||||||
Sbjct: 61 gaatcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatc 120
Query: 131 tcaggagctttaacttaccctttaattgcttttacccttctttggattgaagggagctct 190
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 121 tcaggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 180
Query: 191 aca 193
|||
Sbjct: 181 aca 183
>46931_ath-miR159a:pmrd
Length = 184
Score = 224 bits (113), Expect = 2e-59
Identities = 167/184 (90%), Gaps = 2/184 (1%)
Strand = Plus / Plus
Query: 11 gtagggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctat 70
|||| |||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||
Sbjct: 1 gtagagctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctat 60
Query: 71 ggataccataagccctaatccttgtattg--aaaaaggacttggtaatatggcttgcata 128
|||| ||||||||||||||||||||| | |||||||| ||||| |||||| |||||||
Sbjct: 61 ggatcccataagccctaatccttgtaaagtaaaaaaggatttggttatatggattgcata 120
Query: 129 tctcaggagctttaacttaccctttaattgcttttacccttctttggattgaagggagct 188
|||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 121 tctcaggagctttaacttgccctttaatggcttttactcttctttggattgaagggagct 180
Query: 189 ctac 192
||||
Sbjct: 181 ctac 184
>46932_ath-miR159b:pmrd
Length = 196
Score = 73.8 bits (37), Expect = 5e-14
Identities = 66/73 (90%), Gaps = 2/73 (2%)
Strand = Plus / Plus
Query: 125 catatctcaggagctttaacttaccc-tttaattgcttttacccttctttggattgaagg 183
||||||||||||||||| |||||||| |||||| |||| || |||||||||||||||||
Sbjct: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
Query: 184 gagctctacatct 196
||||||| |||||
Sbjct: 181 gagctcttcatct 193
Score = 65.9 bits (33), Expect = 1e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 16 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 75
||||||| ||||||| ||| ||||||| |||| ||| ||||||||||||||||||||
Sbjct: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
Query: 76 ccataagcc 84
|||||||||
Sbjct: 67 ccataagcc 75
>48539_gma-miR159a:pmrd
Length = 214
Score = 56.0 bits (28), Expect = 1e-08
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 166 ccttctttggattgaagggagctctaca 193
||||||||||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctctaca 197
>54378_pvu-miR159:pmrd
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 166 ccttctttggattgaagggagctctac 192
|||||||||||||||||||||||||||
Sbjct: 148 ccttctttggattgaagggagctctac 174
>54377_pvu-miR159:pmrd
Length = 174
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 166 ccttctttggattgaagggagctctac 192
|||||||||||||||||||||||||||
Sbjct: 148 ccttctttggattgaagggagctctac 174
>48701_mtr-miR159c:pmrd
Length = 44
Score = 54.0 bits (27), Expect = 4e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctacatctt 197
|||||||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctacatctt 27
>48728_mtr-miR319b:pmrd
Length = 42
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 172 ttggattgaagggagctctacatctt 197
||||||||||||||||||||||||||
Sbjct: 1 ttggattgaagggagctctacatctt 26
>48820_osa-miR159b:pmrd
Length = 188
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatctt 197
|||||||||||||||||||||| ||||||
Sbjct: 156 tctttggattgaagggagctctgcatctt 184
>48819_osa-miR159a:pmrd
Length = 272
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatctt 197
|||||||||||||||||||||| ||||||
Sbjct: 240 tctttggattgaagggagctctgcatctt 268
>48796_oru-miR159:pmrd
Length = 274
Score = 50.1 bits (25), Expect = 7e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatctt 197
|||||||||||||||||||||| ||||||
Sbjct: 240 tctttggattgaagggagctctgcatctt 268
>54777_vvi-miR159c:pmrd
Length = 190
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 166 ccttctttggattgaagggagctctaca 193
|||| |||||||||||||||||||||||
Sbjct: 155 ccttgtttggattgaagggagctctaca 182
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 118 tggcttgcatatctcaggagct 139
||||||||||||||||||||||
Sbjct: 114 tggcttgcatatctcaggagct 135
>54674_tae-miR159b:pmrd
Length = 255
Score = 48.1 bits (24), Expect = 3e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatct 196
|||||||||||||||||||||| |||||
Sbjct: 228 tctttggattgaagggagctctgcatct 255
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 ggcttgcatatctcaggagcttta 142
||||||||||||||||||||||||
Sbjct: 104 ggcttgcatatctcaggagcttta 127
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctcta 191
|||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 ggcttgcatatctcaggagcttta 142
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctcta 191
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>51603_ptc-miR159b:pmrd
Length = 187
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 ggcttgcatatctcaggagcttta 142
||||||||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctcta 191
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
>51602_ptc-miR159a:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 ggcttgcatatctcaggagcttta 142
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctcta 191
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>48699_mtr-miR159a:pmrd
Length = 168
Score = 48.1 bits (24), Expect = 3e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 168 ttctttggattgaagggagctcta 191
||||||||||||||||||||||||
Sbjct: 145 ttctttggattgaagggagctcta 168
>54931_zma-miR159b:pmrd
Length = 221
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctacatctt 197
|||||||||||||||||||| ||||||
Sbjct: 182 tttggattgaagggagctctgcatctt 208
>54930_zma-miR159a:pmrd
Length = 246
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatc 195
|||||||||||||||||||||| ||||
Sbjct: 205 tctttggattgaagggagctctgcatc 231
>54631_sof-miR159d:pmrd
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatc 195
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>54629_sof-miR159b:pmrd
Length = 266
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatc 195
|||||||||||||||||||||| ||||
Sbjct: 225 tctttggattgaagggagctctgcatc 251
>54628_sof-miR159a:pmrd
Length = 265
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctctacatc 195
|||||||||||||||||||||| ||||
Sbjct: 224 tctttggattgaagggagctctgcatc 250
>48686_ltu-miR159:pmrd
Length = 345
Score = 46.1 bits (23), Expect = 1e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctaca 193
|||||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctctaca 23
>48656_hvv-miR159a:pmrd
Length = 303
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 171 tttggattgaagggagctctacatctt 197
|||||||||||||||||||| ||||||
Sbjct: 1 tttggattgaagggagctctgcatctt 27
>54392_sar-miR159:pmrd
Length = 175
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 169 tctttggattgaagggagctct 190
||||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctct 248
>48824_osa-miR159f:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 ttggattgaagggagctctaca 193
||||||||||||||||||||||
Sbjct: 159 ttggattgaagggagctctaca 180
