miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>39936_aly-MIR858:mirbase
Length = 938
Score = 133 bits (67), Expect = 3e-31
Identities = 82/87 (94%)
Strand = Plus / Minus
Query: 872 aggacagatcgagaccaaggtcgaacagacaacgaaacaaagatggaaacacataagatt 931
|||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 99 aggagagatcgagaccaaggtcgaacagacaacgaaacaaagatgagaacacataagatt 40
Query: 932 gctcacgttgacaagcctagcatcgaa 958
|||||| ||| ||||||||||||||||
Sbjct: 39 gctcactttgtcaagcctagcatcgaa 13
Score = 91.7 bits (46), Expect = 1e-18
Identities = 70/78 (89%)
Strand = Plus / Minus
Query: 7 gcaaacacttgtcaacggagtaatctcgatctgattccatcttatcttcgttttctgttc 66
||||||||||||||| |||||| || ||||||| |||||||||||||||||| |||| ||
Sbjct: 920 gcaaacacttgtcaaaggagtagtcccgatctggttccatcttatcttcgttgtctgctc 861
Query: 67 gaccttggttttggcttt 84
|||||||| |||| ||||
Sbjct: 860 gaccttggctttgacttt 843
>40188_ath-MIR858:mirbase
Length = 187
Score = 83.8 bits (42), Expect = 2e-16
Identities = 45/46 (97%)
Strand = Plus / Minus
Query: 871 gaggacagatcgagaccaaggtcgaacagacaacgaaacaaagatg 916
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 gaggagagatcgagaccaaggtcgaacagacaacgaaacaaagatg 3
Score = 48.1 bits (24), Expect = 1e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 800 atgatcataagaaggatgtatgaaagaaataa 831
|||||||||||||||||| ||||| |||||||
Sbjct: 105 atgatcataagaaggatggatgaatgaaataa 74
