miRNEST 2.0, an integrative microRNA resource :: BLAST
>40312_bra-MIR160a:mirbase
Length = 127
Score = 99.6 bits (50), Expect = 4e-22
Identities = 80/90 (88%)
Strand = Plus / Plus
Query: 13 atgtatatgcctggctccctgtatgccatacactaagttcatcgaccatcggcgacctcg 72
|||| |||||||||||||||||||||||| | ||||| ||||||||||| | ||||||
Sbjct: 19 atgtgtatgcctggctccctgtatgccatcctctaagctcatcgaccattgatgacctcc 78
Query: 73 gtggatggcgtatgaggagccaagcatatt 102
||| |||||||||||||||||| |||||||
Sbjct: 79 gtgaatggcgtatgaggagccatgcatatt 108
>39807_aly-MIR160a:mirbase
Length = 158
Score = 99.6 bits (50), Expect = 4e-22
Identities = 92/105 (87%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 2 atgtattatatatgtatatgcctggctccctgtatgccatacactaagttcatcgaccat 61
||||||||||||||||| |||||||||||||||||||||| || || ||||||| ||
Sbjct: 26 atgtattatatatgtat--gcctggctccctgtatgccatatgctgagctcatcgagtat 83
Query: 62 cggcgacctcggtggatggcgtatgaggagccaagcatattctca 106
|| |||||| |||||||||||||||||||||| |||||| ||||
Sbjct: 84 cgatgacctccgtggatggcgtatgaggagccatgcatatcctca 128
>40019_ath-MIR160a:mirbase
Length = 85
Score = 79.8 bits (40), Expect = 4e-16
Identities = 73/84 (86%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgccatacactaagttcatcgaccatcggcgacctcggtgga 77
||||||||||||||||||||||||| || || |||||| |||| |||||| |||||
Sbjct: 2 tatgcctggctccctgtatgccatatgctgagcccatcgagtatcgatgacctccgtgga 61
Query: 78 tggcgtatgaggagccaagcatat 101
||||||||||||||||| ||||||
Sbjct: 62 tggcgtatgaggagccatgcatat 85
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 73 gtggatggcgtatgaggagccaagcatattc 103
|||||||||||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagccaagcatattc 90
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 73 gtggatggcgtatgaggagccaagcatattc 103
|||||||||||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagccaagcatattc 90
>40436_gma-MIR160:mirbase
Length = 119
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 73 gtggatggcgtatgaggagccaagcatatt 102
||||||||||||||||||||||||||||||
Sbjct: 75 gtggatggcgtatgaggagccaagcatatt 104
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 68 cctcggtggatggcgtatgaggagccaagcatattc 103
|||| |||||||||||||||||||||| ||||||||
Sbjct: 60 cctccgtggatggcgtatgaggagccatgcatattc 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccat 41
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 68 cctcggtggatggcgtatgaggagccaagcatattc 103
|||| |||||||||||||||||||||| ||||||||
Sbjct: 60 cctccgtggatggcgtatgaggagccatgcatattc 95
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccat 41
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>41219_csi-MIR160:mirbase
Length = 143
Score = 56.0 bits (28), Expect = 6e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 68 cctcggtggatggcgtatgaggagccaagcatattc 103
|||| |||||||||||||||||||||| ||||||||
Sbjct: 82 cctccgtggatggcgtatgaggagccatgcatattc 117
>41529_sly-MIR160a:mirbase
Length = 129
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 15 gtatatgcctggctccctgtatgccat 41
|||||||||||||||||||||||||||
Sbjct: 15 gtatatgcctggctccctgtatgccat 41
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 77 atggcgtatgaggagccaagcatattc 103
|||||||||||||||||||||||||||
Sbjct: 81 atggcgtatgaggagccaagcatattc 107
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 9e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 16 tatatgcctggctccctgtatgccat 41
||||||||||||||||||||||||||
Sbjct: 7 tatatgcctggctccctgtatgccat 32
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 73 gtggatggcgtatgaggagccaagcatat 101
|||||||||||||||||||||| ||||||
Sbjct: 65 gtggatggcgtatgaggagccatgcatat 93
>42705_zma-MIR160e:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 atatgcctggctccctgtatgcca 40
||||||||||||||||||||||||
Sbjct: 6 atatgcctggctccctgtatgcca 29
>42704_zma-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 atatgcctggctccctgtatgcca 40
||||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcca 41
>42636_tae-MIR160:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 atatgcctggctccctgtatgcca 40
||||||||||||||||||||||||
Sbjct: 19 atatgcctggctccctgtatgcca 42
>41926_osa-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 atatgcctggctccctgtatgcca 40
||||||||||||||||||||||||
Sbjct: 5 atatgcctggctccctgtatgcca 28
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 17 atatgcctggctccctgtatgcca 40
||||||||||||||||||||||||
Sbjct: 29 atatgcctggctccctgtatgcca 52
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgccat 41
||||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgccat 42
>42706_zma-MIR160f:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 atatgcctggctccctgtatgcc 39
|||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcc 40
>41927_osa-MIR160e:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 17 atatgcctggctccctgtatgcc 39
|||||||||||||||||||||||
Sbjct: 8 atatgcctggctccctgtatgcc 30
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 19 atgcctggctccctgtatgccat 41
|||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgccat 32
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgcca 40
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgcca 40
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>40340_rco-MIR160b:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgcca 40
|||||||||||||||||||||||
Sbjct: 4 tatgcctggctccctgtatgcca 26
>40021_ath-MIR160c:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgcca 40
|||||||||||||||||||||||
Sbjct: 3 tatgcctggctccctgtatgcca 25
>39809_aly-MIR160c:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 18 tatgcctggctccctgtatgcca 40
|||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgcca 44
>42707_zma-MIR160g:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 atgcctggctccctgtatgcca 40
||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgcca 22
>41869_far-MIR160:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 19 atgcctggctccctgtatgcca 40
||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgcca 73
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccat 41
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccat 22
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccat 41
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
>40658_mtr-MIR160:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccat 41
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccat 42
>40339_rco-MIR160a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccat 41
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
>39731_smo-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccat 41
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>39375_pab-MIR160b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgccat 41
||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41
>42703_zma-MIR160c:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>42702_zma-MIR160b:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>42701_zma-MIR160a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30
>42677_ttu-MIR160:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41925_osa-MIR160c:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>41924_osa-MIR160b:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>41923_osa-MIR160a:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>40020_ath-MIR160b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>39808_aly-MIR160b:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>39732_smo-MIR160b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39374_pab-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 20 tgcctggctccctgtatgcca 40
|||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgcca 34
