miRNEST 2.0, an integrative microRNA resource :: BLAST
>47339_ath-miRf10239-akr:pmrd
Length = 129
Score = 81.8 bits (41), Expect = 1e-16
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 69 ttattggtttgtaagcatggattggctcccgccttgcatcaactgaatcggagcctc 125
|||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||||
Sbjct: 71 ttattggtttgtgagcagggattggatcccgccttgcatcaactgaatcggatcctc 127
>46957_ath-miR168a:pmrd
Length = 138
Score = 81.8 bits (41), Expect = 1e-16
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 69 ttattggtttgtaagcatggattggctcccgccttgcatcaactgaatcggagcctc 125
|||||||||||| |||| ||||||| |||||||||||||||||||||||||| ||||
Sbjct: 76 ttattggtttgtgagcagggattggatcccgccttgcatcaactgaatcggatcctc 132
>46959_ath-miR168m:pmrd
Length = 104
Score = 67.9 bits (34), Expect = 2e-12
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 69 ttattggtttgtaagcatggattggctcccgccttgcatcaactga 114
|||||||||||| |||| ||||||| ||||||||||||||||||||
Sbjct: 59 ttattggtttgtgagcagggattggatcccgccttgcatcaactga 104
>51651_ptc-miR168b:pmrd
Length = 136
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 89 attggctcccgccttgcatcaactgaatcggag 121
||||| |||||||||||||||||||||||||||
Sbjct: 103 attggatcccgccttgcatcaactgaatcggag 135
>51650_ptc-miR168a:pmrd
Length = 160
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 89 attggctcccgccttgcatcaactgaatcggag 121
||||| |||||||||||||||||||||||||||
Sbjct: 127 attggatcccgccttgcatcaactgaatcggag 159
>48560_gma-miR168:pmrd
Length = 125
Score = 58.0 bits (29), Expect = 2e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 89 attggctcccgccttgcatcaactgaatcggag 121
||||| |||||||||||||||||||||||||||
Sbjct: 81 attggatcccgccttgcatcaactgaatcggag 113
>54802_vvi-miR168:pmrd
Length = 132
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 95 tcccgccttgcatcaactgaatcggag 121
|||||||||||||||||||||||||||
Sbjct: 101 tcccgccttgcatcaactgaatcggag 127
>46958_ath-miR168b:pmrd
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 37/39 (94%), Gaps = 1/39 (2%)
Strand = Plus / Plus
Query: 10 gattcgcttggtgcagttcggg-actgattggctgacac 47
|||||||||||||||| ||||| ||||||||||||||||
Sbjct: 16 gattcgcttggtgcaggtcgggaactgattggctgacac 54
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 93 gctcccgccttgcatcaactgaatcggag 121
||||||| |||| ||||||||||||||||
Sbjct: 86 gctcccgtcttgtatcaactgaatcggag 114
>54388_rco-miR168:pmrd
Length = 156
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 89 attggctcccgccttgcatcaactgaatcg 118
||||| ||||||||||||||||||||||||
Sbjct: 112 attggatcccgccttgcatcaactgaatcg 141
Score = 42.1 bits (21), Expect = 1e-04
Identities = 31/33 (93%), Gaps = 1/33 (3%)
Strand = Plus / Plus
Query: 11 attcgcttggtgcagttcggg-actgattggct 42
||||||||||||||| ||||| |||||||||||
Sbjct: 17 attcgcttggtgcaggtcgggaactgattggct 49
>55000_zma-miR168b:pmrd
Length = 104
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 95 tcccgccttgcatcaactgaatcggagcc 123
|||||||||||||||| ||||||||||||
Sbjct: 66 tcccgccttgcatcaagtgaatcggagcc 94
>48349_bna-miR168:pmrd
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 34/36 (94%), Gaps = 1/36 (2%)
Strand = Plus / Plus
Query: 13 tcgcttggtgcagttcggg-actgattggctgacac 47
||||||||||||| ||||| ||||||||||||||||
Sbjct: 18 tcgcttggtgcaggtcgggaactgattggctgacac 53
>54375_pts-miR168b:pmrd
Length = 140
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 89 attggctcccgccttgcatcaactga 114
||||| ||||||||||||||||||||
Sbjct: 115 attggatcccgccttgcatcaactga 140
>54374_pts-miR168a:pmrd
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 89 attggctcccgccttgcatcaactga 114
||||| ||||||||||||||||||||
Sbjct: 93 attggatcccgccttgcatcaactga 118
>54366_ptr-miR168:pmrd
Length = 118
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 89 attggctcccgccttgcatcaactga 114
||||| ||||||||||||||||||||
Sbjct: 93 attggatcccgccttgcatcaactga 118
>54999_zma-miR168a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 95 tcccgccttgcatcaactgaatcggagcc 123
|||||||||||| ||| ||||||||||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagcc 94
>54665_stu-miR168:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 90 ttggctcccgccttgcatcaactga 114
|||| ||||||||||||||||||||
Sbjct: 109 ttgggtcccgccttgcatcaactga 133
>54637_sof-miR168b:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 95 tcccgccttgcatcaactgaatcggagcc 123
|||||||||||| ||| ||||||||||||
Sbjct: 65 tcccgccttgcaccaagtgaatcggagcc 93
>54636_sof-miR168a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 95 tcccgccttgcatcaactgaatcggagcc 123
|||||||||||| ||| ||||||||||||
Sbjct: 66 tcccgccttgcaccaagtgaatcggagcc 94
>48873_osa-miR168a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 95 tcccgccttgcatcaactgaatcggagcc 123
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>48872_osa-miR168a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 95 tcccgccttgcatcaactgaatcggagcc 123
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
>48871_osa-miR168a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 95 tcccgccttgcatcaactgaatcggagcc 123
|||||||||||| ||| ||||||||||||
Sbjct: 58 tcccgccttgcaccaagtgaatcggagcc 86
