miRNEST 2.0, an integrative microRNA resource :: BLAST
>48493_ghr-miR162a:pmrd
Length = 148
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctgagaa 45
|||||||||||||||||||||||||||||||||||
Sbjct: 24 ctggaggcagcggttcatcgatctcttcctgagaa 58
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 92 gatcgataaacctctgcatccagcg 116
|||||||||||||||||||||||||
Sbjct: 92 gatcgataaacctctgcatccagcg 116
>46937_ath-miR162a:pmrd
Length = 140
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 78 taaaagcatgaacagatcgataaacctctgcatccagcg 116
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 73 taaaagcatgaatagatcgataaacctctgcatccagcg 111
Score = 65.9 bits (33), Expect = 7e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 gtgacagttgctggaggcagcggttcatcgatctcttcctg 41
|||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 15 gtgagagtcgctggaggcagcggttcatcgatctcttcctg 55
>54387_rco-miR162:pmrd
Length = 96
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||
Sbjct: 3 ctggaggcagcggttcatcgatctcttcctg 33
Score = 56.0 bits (28), Expect = 6e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 72 aaaaattaaaagcatgaacagatcgataaacctctgcatccagc 115
|||||| ||| ||||||| ||||||||||||||||||||||||
Sbjct: 53 aaaaataaaacgcatgaatcgatcgataaacctctgcatccagc 96
>52400_ptc-miRf10578-akr:pmrd
Length = 103
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||
Sbjct: 95 ctggaggcagcggttcatcgatctcttcctg 65
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 79 aaaagcatgaacagatcgataaacctctgcatccagcg 116
|||| ||||||| |||||||||||||||||||||||||
Sbjct: 43 aaaaacatgaaccgatcgataaacctctgcatccagcg 6
>52399_ptc-miRf10577-akr:pmrd
Length = 103
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||
Sbjct: 95 ctggaggcagcggttcatcgatctcttcctg 65
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 79 aaaagcatgaacagatcgataaacctctgcatccagcg 116
|||| ||||||| |||||||||||||||||||||||||
Sbjct: 43 aaaaacatgaaccgatcgataaacctctgcatccagcg 6
>51616_ptc-miR162a:pmrd
Length = 107
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatctcttcctg 41
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 79 aaaagcatgaacagatcgataaacctctgcatccagcg 116
|||| ||||||| |||||||||||||||||||||||||
Sbjct: 63 aaaaacatgaaccgatcgataaacctctgcatccagcg 100
>48423_cpa-miR162a:pmrd
Length = 109
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||
Sbjct: 13 ctggaggcagcggttcatcgatctcttcctg 43
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 92 gatcgataaacctctgcatccagcg 116
|||||||||||||||||||||||||
Sbjct: 78 gatcgataaacctctgcatccagcg 102
>54784_vvi-miR162:pmrd
Length = 103
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
||||| ||||||||||||||||||||||||||
Sbjct: 9 ctggatgcagcggttcatcgatctcttcctga 40
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 tcgataaacctctgcatccagcg 116
|||||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatccagcg 95
>52498_ptc-miRf10676-akr:pmrd
Length = 101
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
|||||||||||||||||||||||| |||||||
Sbjct: 94 ctggaggcagcggttcatcgatcttttcctga 63
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 87 gaacagatcgataaacctctgcatccag 114
|||| |||||||||||||||||||||||
Sbjct: 34 gaaccgatcgataaacctctgcatccag 7
>52497_ptc-miRf10675-akr:pmrd
Length = 105
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
|||||||||||||||||||||||| |||||||
Sbjct: 96 ctggaggcagcggttcatcgatcttttcctga 65
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 87 gaacagatcgataaacctctgcatccag 114
|||| |||||||||||||||||||||||
Sbjct: 36 gaaccgatcgataaacctctgcatccag 9
>52244_ptc-miRf10422-akr:pmrd
Length = 105
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
|||||||||||||||||||||||| |||||||
Sbjct: 96 ctggaggcagcggttcatcgatcttttcctga 65
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 87 gaacagatcgataaacctctgcatccag 114
|||| |||||||||||||||||||||||
Sbjct: 36 gaaccgatcgataaacctctgcatccag 9
>52243_ptc-miRf10421-akr:pmrd
Length = 101
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
|||||||||||||||||||||||| |||||||
Sbjct: 94 ctggaggcagcggttcatcgatcttttcctga 63
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 87 gaacagatcgataaacctctgcatccag 114
|||| |||||||||||||||||||||||
Sbjct: 34 gaaccgatcgataaacctctgcatccag 7
>51618_ptc-miR162c:pmrd
Length = 107
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
|||||||||||||||||||||||| |||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctga 42
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 87 gaacagatcgataaacctctgcatccag 114
|||| |||||||||||||||||||||||
Sbjct: 71 gaaccgatcgataaacctctgcatccag 98
>51617_ptc-miR162b:pmrd
Length = 107
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
|||||||||||||||||||||||| |||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctga 42
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 87 gaacagatcgataaacctctgcatccag 114
|||| |||||||||||||||||||||||
Sbjct: 71 gaaccgatcgataaacctctgcatccag 98
>48545_gma-miR162a:pmrd
Length = 102
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
||||| ||||||||||||||||||||||||||
Sbjct: 10 ctggatgcagcggttcatcgatctcttcctga 41
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 92 gatcgataaacctctgcatccagcg 116
|||||||||||||||||||||||||
Sbjct: 71 gatcgataaacctctgcatccagcg 95
>47354_ath-miRf10254-akr:pmrd
Length = 115
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 79 aaaagcatgaacagatcgataaacctctgcatccagcg 116
||||||| ||| |||||||||||||||||||||||||
Sbjct: 50 aaaagcaagaatcgatcgataaacctctgcatccagcg 13
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 10 gctggaggcagcggttcatcgatc 33
||||||||||||||||||||||||
Sbjct: 103 gctggaggcagcggttcatcgatc 80
>46938_ath-miR162b:pmrd
Length = 111
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 79 aaaagcatgaacagatcgataaacctctgcatccagcg 116
||||||| ||| |||||||||||||||||||||||||
Sbjct: 64 aaaagcaagaatcgatcgataaacctctgcatccagcg 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 gctggaggcagcggttcatcgatc 33
||||||||||||||||||||||||
Sbjct: 11 gctggaggcagcggttcatcgatc 34
>48707_mtr-miR162d:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
||||| |||||||||||||||||| |||||||
Sbjct: 1 ctggatgcagcggttcatcgatctgttcctga 32
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 94 tcgataaacctctgcatccag 114
|||||||||||||||||||||
Sbjct: 67 tcgataaacctctgcatccag 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 87 gaacagatcgataaacctctgcatccag 114
|||||||||||| |||| ||||||||||
Sbjct: 28 gaacagatcgatgaaccgctgcatccag 1
>48706_mtr-miR162c:pmrd
Length = 86
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
||||| |||||||||||||||||| |||||||
Sbjct: 86 ctggatgcagcggttcatcgatctgttcctga 55
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 94 tcgataaacctctgcatcca 113
||||||||||||||||||||
Sbjct: 20 tcgataaacctctgcatcca 1
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 87 gaacagatcgataaacctctgcatccag 114
|||||||||||| |||| ||||||||||
Sbjct: 59 gaacagatcgatgaaccgctgcatccag 86
>48682_llu-miR162:pmrd
Length = 80
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
||||| ||||||||| ||||||||||||||||
Sbjct: 1 ctggaagcagcggtttatcgatctcttcctga 32
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 gatcgataaacctctgcatccag 114
|||||||||||||||||||||||
Sbjct: 58 gatcgataaacctctgcatccag 80
>48834_osa-miR162a:pmrd
Length = 171
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 92 gatcgataaacctctgcatccag 114
|||||||||||||||||||||||
Sbjct: 141 gatcgataaacctctgcatccag 163
>48705_mtr-miR162b:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 6e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 12 tggaggcagcggttcatcgatctcttcctga 42
|||| |||||||||||||||||| |||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcctga 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 94 tcgataaacctctgcatcca 113
||||||||||||||||||||
Sbjct: 66 tcgataaacctctgcatcca 85
>48685_lsa-miR162:pmrd
Length = 89
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 tcgataaacctctgcatccagcg 116
|||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcg 23
>48546_gma-miR162m:pmrd
Length = 367
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 tcgataaacctctgcatccagcg 116
|||||||||||||||||||||||
Sbjct: 1 tcgataaacctctgcatccagcg 23
>54948_zma-miR162b:pmrd
Length = 130
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 94 tcgataaacctctgcatccag 114
|||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130
>54542_sly-miR162:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 94 tcgataaacctctgcatccag 114
|||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99
>48690_mdo-miR162:pmrd
Length = 88
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatct 34
||||||||| ||||||||||||||
Sbjct: 1 ctggaggcatcggttcatcgatct 24
