miRNEST 2.0, an integrative microRNA resource :: BLAST
>48374_bna-miR396a:pmrd
Length = 117
Score = 173 bits (86), Expect = 4e-44
Identities = 88/88 (100%)
Strand = Plus / Minus
Query: 50 tagagtgttaaatgttagagatttttagttatttaatttcgctstaaaataagggaaatg 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 tagagtgttaaatgttagagatttttagttatttaatttcgctstaaaataagggaaatg 29
Query: 110 aaaaagaaagttcaagaaagctgtggaa 137
||||||||||||||||||||||||||||
Sbjct: 28 aaaaagaaagttcaagaaagctgtggaa 1
>47009_ath-miR396b:pmrd
Length = 135
Score = 74.8 bits (37), Expect = 2e-14
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 103 ggaaatgaaaaagaaagttcaagaaagctgtggaaaa 139
|||||||||||||||||||||||||||||||||||||
Sbjct: 45 ggaaatgaaaaagaaagttcaagaaagctgtggaaaa 9
Score = 54.7 bits (27), Expect = 2e-08
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 11 tgtcatgttttcccacagctttsttgagc 39
|||||||||||||||||||||| ||||||
Sbjct: 135 tgtcatgttttcccacagctttcttgagc 107
>52304_ptc-miRf10482-akr:pmrd
Length = 102
Score = 48.7 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 117 aagttcaagaaagctgtggaaaaa 140
||||||||||||||||||||||||
Sbjct: 73 aagttcaagaaagctgtggaaaaa 96
>51736_ptc-miR396c:pmrd
Length = 102
Score = 48.7 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 117 aagttcaagaaagctgtggaaaaa 140
||||||||||||||||||||||||
Sbjct: 31 aagttcaagaaagctgtggaaaaa 8
>51564_pta-miR396:pmrd
Length = 119
Score = 48.7 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 116 aaagttcaagaaagctgtggaaaa 139
||||||||||||||||||||||||
Sbjct: 38 aaagttcaagaaagctgtggaaaa 15
>54869_vvi-miR396b:pmrd
Length = 108
Score = 46.7 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 117 aagttcaagaaagctgtggaaaa 139
|||||||||||||||||||||||
Sbjct: 34 aagttcaagaaagctgtggaaaa 12
>53179_ptc-miRf11357-akr:pmrd
Length = 141
Score = 46.7 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 aagttcaagaaagctgtggaaaa 139
|||||||||||||||||||||||
Sbjct: 114 aagttcaagaaagctgtggaaaa 136
Score = 40.7 bits (20), Expect = 3e-04
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 14 catgttttcccacagctttsttgagc 39
|||||| |||||||||||| ||||||
Sbjct: 1 catgttctcccacagctttcttgagc 26
>52893_ptc-miRf11071-akr:pmrd
Length = 148
Score = 46.7 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 aagttcaagaaagctgtggaaaa 139
|||||||||||||||||||||||
Sbjct: 122 aagttcaagaaagctgtggaaaa 144
>52080_ptc-miRf10258-akr:pmrd
Length = 141
Score = 46.7 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 117 aagttcaagaaagctgtggaaaa 139
|||||||||||||||||||||||
Sbjct: 114 aagttcaagaaagctgtggaaaa 136
Score = 40.7 bits (20), Expect = 3e-04
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 14 catgttttcccacagctttsttgagc 39
|||||| |||||||||||| ||||||
Sbjct: 1 catgttctcccacagctttcttgagc 26
>51738_ptc-miR396e:pmrd
Length = 145
Score = 46.7 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 117 aagttcaagaaagctgtggaaaa 139
|||||||||||||||||||||||
Sbjct: 31 aagttcaagaaagctgtggaaaa 9
Score = 40.7 bits (20), Expect = 3e-04
Identities = 24/26 (92%)
Strand = Plus / Minus
Query: 14 catgttttcccacagctttsttgagc 39
|||||| |||||||||||| ||||||
Sbjct: 144 catgttctcccacagctttcttgagc 119
>51737_ptc-miR396d:pmrd
Length = 154
Score = 46.7 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 117 aagttcaagaaagctgtggaaaa 139
|||||||||||||||||||||||
Sbjct: 31 aagttcaagaaagctgtggaaaa 9
>48748_mtr-miR396a:pmrd
Length = 93
Score = 46.7 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 117 aagttcaagaaagctgtggaaaa 139
|||||||||||||||||||||||
Sbjct: 26 aagttcaagaaagctgtggaaaa 4
>48580_gma-miR396c:pmrd
Length = 117
Score = 46.7 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 117 aagttcaagaaagctgtggaaaa 139
|||||||||||||||||||||||
Sbjct: 41 aagttcaagaaagctgtggaaaa 19
>48579_gma-miR396b:pmrd
Length = 126
Score = 46.7 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 117 aagttcaagaaagctgtggaaaa 139
|||||||||||||||||||||||
Sbjct: 41 aagttcaagaaagctgtggaaaa 19
Score = 44.7 bits (22), Expect = 2e-05
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 4 cctgaattgtcatgttttcccacagctttsttgagc 39
||||||||| ||| || |||||||||||| ||||||
Sbjct: 124 cctgaattgccatattctcccacagctttcttgagc 89
>55078_zma-miR396g:pmrd
Length = 117
Score = 44.7 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 117 aagttcaagaaagctgtggaaa 138
||||||||||||||||||||||
Sbjct: 23 aagttcaagaaagctgtggaaa 2
>55077_zma-miR396f:pmrd
Length = 166
Score = 44.7 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 117 aagttcaagaaagctgtggaaa 138
||||||||||||||||||||||
Sbjct: 23 aagttcaagaaagctgtggaaa 2
>54868_vvi-miR396a:pmrd
Length = 116
Score = 44.7 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaaaa 139
||||||||||||||||||||||
Sbjct: 33 agttcaagaaagctgtggaaaa 12
>54487_sbi-miR396c:pmrd
Length = 162
Score = 44.7 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 117 aagttcaagaaagctgtggaaa 138
||||||||||||||||||||||
Sbjct: 41 aagttcaagaaagctgtggaaa 20
>48947_osa-miR396c:pmrd
Length = 141
Score = 44.7 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 117 aagttcaagaaagctgtggaaa 138
||||||||||||||||||||||
Sbjct: 31 aagttcaagaaagctgtggaaa 10
>46888_aqc-miR396b:pmrd
Length = 89
Score = 44.7 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 116 aaagttcaagaaagctgtggaa 137
||||||||||||||||||||||
Sbjct: 22 aaagttcaagaaagctgtggaa 1
>54871_vvi-miR396d:pmrd
Length = 120
Score = 42.7 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaaaaata 142
|||||||||||||||||||| ||||
Sbjct: 30 agttcaagaaagctgtggaagaata 6
>52079_ptc-miRf10257-akr:pmrd
Length = 130
Score = 42.7 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaaaaata 142
|||||||||||||||||||| ||||
Sbjct: 28 agttcaagaaagctgtggaagaata 4
>51735_ptc-miR396b:pmrd
Length = 132
Score = 42.7 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaaaaata 142
|||||||||||||||||||| ||||
Sbjct: 30 agttcaagaaagctgtggaagaata 6
>51734_ptc-miR396a:pmrd
Length = 123
Score = 42.7 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaaaaata 142
|||||||||||||||||||| ||||
Sbjct: 30 agttcaagaaagctgtggaagaata 6
>48680_lja-miR396:pmrd
Length = 108
Score = 42.7 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaaaaata 142
|||||||||||||||||||| ||||
Sbjct: 35 agttcaagaaagctgtggaagaata 11
>48578_gma-miR396a:pmrd
Length = 140
Score = 42.7 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaaaaata 142
|||||||||||||||||||| ||||
Sbjct: 40 agttcaagaaagctgtggaagaata 16
>48110_ath-miRf11010-akr:pmrd
Length = 165
Score = 42.7 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaaaaata 142
|||||||||||||||||||| ||||
Sbjct: 37 agttcaagaaagctgtggaagaata 13
>47008_ath-miR396a:pmrd
Length = 151
Score = 42.7 bits (21), Expect = 8e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaaaaata 142
|||||||||||||||||||| ||||
Sbjct: 30 agttcaagaaagctgtggaagaata 6
>55083_zma-miR396l:pmrd
Length = 97
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 20 agttcaagaaagctgtggaa 1
>55082_zma-miR396k:pmrd
Length = 98
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 20 agttcaagaaagctgtggaa 1
>55081_zma-miR396j:pmrd
Length = 98
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 20 agttcaagaaagctgtggaa 1
>55080_zma-miR396i:pmrd
Length = 103
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 20 agttcaagaaagctgtggaa 1
>55079_zma-miR396h:pmrd
Length = 116
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 23 agttcaagaaagctgtggaa 4
>55074_zma-miR396c:pmrd
Length = 104
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 23 agttcaagaaagctgtggaa 4
>55073_zma-miR396b:pmrd
Length = 136
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 40 agttcaagaaagctgtggaa 21
>55072_zma-miR396a:pmrd
Length = 137
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 40 agttcaagaaagctgtggaa 21
>54870_vvi-miR396c:pmrd
Length = 108
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 30 agttcaagaaagctgtggaa 11
>54645_sof-miR396:pmrd
Length = 134
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 40 agttcaagaaagctgtggaa 21
>54486_sbi-miR396b:pmrd
Length = 128
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 40 agttcaagaaagctgtggaa 21
>54485_sbi-miR396a:pmrd
Length = 125
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 40 agttcaagaaagctgtggaa 21
>48946_osa-miR396b:pmrd
Length = 116
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 30 agttcaagaaagctgtggaa 11
>48945_osa-miR396a:pmrd
Length = 154
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 30 agttcaagaaagctgtggaa 11
>48508_ghr-miR396c:pmrd
Length = 115
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 20 agttcaagaaagctgtggaa 1
>48507_ghr-miR396b:pmrd
Length = 115
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 20 agttcaagaaagctgtggaa 1
>48485_gcl-miR396a:pmrd
Length = 101
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 82 agttcaagaaagctgtggaa 101
>46887_aqc-miR396a:pmrd
Length = 122
Score = 40.7 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 118 agttcaagaaagctgtggaa 137
||||||||||||||||||||
Sbjct: 20 agttcaagaaagctgtggaa 1
