miRNEST 2.0, an integrative microRNA resource :: BLAST
>40312_bra-MIR160a:mirbase
Length = 127
Score = 123 bits (62), Expect = 3e-29
Identities = 92/102 (90%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgccatacactaagctcatcgaccatcgaggacttacgtgga 86
|||||||||||||||||||||||| | ||||||||||||||||| || ||| | |||| |
Sbjct: 24 tatgcctggctccctgtatgccatcctctaagctcatcgaccattgatgacctccgtgaa 83
Query: 87 tggcgtatgaggagccaagcatattttcatatgcatatacat 128
||||||||||||||||| |||||||||||||| ||| |||||
Sbjct: 84 tggcgtatgaggagccatgcatattttcatatacatttacat 125
>39807_aly-MIR160a:mirbase
Length = 158
Score = 95.6 bits (48), Expect = 8e-21
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgccatacactaagctcatcgaccatcgaggacttacgtgga 86
||||||||||||||||||||||||| || |||||||||| ||||| ||| | ||||||
Sbjct: 40 tatgcctggctccctgtatgccatatgctgagctcatcgagtatcgatgacctccgtgga 99
Query: 87 tggcgtatgaggagccaagcatat 110
||||||||||||||||| ||||||
Sbjct: 100 tggcgtatgaggagccatgcatat 123
>40019_ath-MIR160a:mirbase
Length = 85
Score = 87.7 bits (44), Expect = 2e-18
Identities = 74/84 (88%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgccatacactaagctcatcgaccatcgaggacttacgtgga 86
||||||||||||||||||||||||| || ||| |||||| ||||| ||| | ||||||
Sbjct: 2 tatgcctggctccctgtatgccatatgctgagcccatcgagtatcgatgacctccgtgga 61
Query: 87 tggcgtatgaggagccaagcatat 110
||||||||||||||||| ||||||
Sbjct: 62 tggcgtatgaggagccatgcatat 85
>40662_mtr-MIR160e:mirbase
Length = 91
Score = 63.9 bits (32), Expect = 3e-11
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccatacactaagctcatcgacca-tcgaggacttacgtggat 87
||||||||||||||||||||||| | |||||||| || | || | ||| | ||||||
Sbjct: 6 tgcctggctccctgtatgccatatatgaagctcattgaaaaatcaatgacctttgtggat 65
Query: 88 ggcgtatgaggagccaagcatatt 111
||||||||||||||||||||||||
Sbjct: 66 ggcgtatgaggagccaagcatatt 89
>40659_mtr-MIR160b:mirbase
Length = 91
Score = 63.9 bits (32), Expect = 3e-11
Identities = 72/84 (85%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccatacactaagctcatcgacca-tcgaggacttacgtggat 87
||||||||||||||||||||||| | |||||||| || | || | ||| | ||||||
Sbjct: 6 tgcctggctccctgtatgccatatatgaagctcattgaaaaatcaatgacctttgtggat 65
Query: 88 ggcgtatgaggagccaagcatatt 111
||||||||||||||||||||||||
Sbjct: 66 ggcgtatgaggagccaagcatatt 89
>40436_gma-MIR160:mirbase
Length = 119
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 82 gtggatggcgtatgaggagccaagcatattt 112
|||||||||||||||||||||||||||||||
Sbjct: 75 gtggatggcgtatgaggagccaagcatattt 105
>41577_vvi-MIR160e:mirbase
Length = 102
Score = 58.0 bits (29), Expect = 2e-09
Identities = 75/89 (84%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 23 catatatgcctggctccctgtatgccatacactaagctcatcgac-catcgaggacttac 81
|||||||||||||||||||||||||||| | ||| || || | |||||| | | | |
Sbjct: 5 catatatgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttc 64
Query: 82 gtggatggcgtatgaggagccaagcatat 110
|||||||||||||||||||||| ||||||
Sbjct: 65 gtggatggcgtatgaggagccatgcatat 93
>41307_ptc-MIR160c:mirbase
Length = 98
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 81 cgtggatggcgtatgaggagccaagcatatt 111
||||||||||||||||||||||| |||||||
Sbjct: 64 cgtggatggcgtatgaggagccatgcatatt 94
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 24 atatatgcctggctccctgtatgccat 50
|||| ||||||||||||||||||||||
Sbjct: 6 atatgtgcctggctccctgtatgccat 32
>41306_ptc-MIR160b:mirbase
Length = 98
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 81 cgtggatggcgtatgaggagccaagcatatt 111
||||||||||||||||||||||| |||||||
Sbjct: 64 cgtggatggcgtatgaggagccatgcatatt 94
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 24 atatatgcctggctccctgtatgccat 50
|||| ||||||||||||||||||||||
Sbjct: 6 atatgtgcctggctccctgtatgccat 32
>41219_csi-MIR160:mirbase
Length = 143
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 81 cgtggatggcgtatgaggagccaagcatatt 111
||||||||||||||||||||||| |||||||
Sbjct: 86 cgtggatggcgtatgaggagccatgcatatt 116
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 33 tgcctggctccctgtatgccat 54
>41529_sly-MIR160a:mirbase
Length = 129
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 25 tatatgcctggctccctgtatgccat 50
||||||||||||||||||||||||||
Sbjct: 16 tatatgcctggctccctgtatgccat 41
Score = 52.0 bits (26), Expect = 1e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 86 atggcgtatgaggagccaagcatatt 111
||||||||||||||||||||||||||
Sbjct: 81 atggcgtatgaggagccaagcatatt 106
>42705_zma-MIR160e:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 atatgcctggctccctgtatgcca 49
||||||||||||||||||||||||
Sbjct: 6 atatgcctggctccctgtatgcca 29
>42704_zma-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 atatgcctggctccctgtatgcca 49
||||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcca 41
>42636_tae-MIR160:mirbase
Length = 148
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 atatgcctggctccctgtatgcca 49
||||||||||||||||||||||||
Sbjct: 19 atatgcctggctccctgtatgcca 42
>41926_osa-MIR160d:mirbase
Length = 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 atatgcctggctccctgtatgcca 49
||||||||||||||||||||||||
Sbjct: 5 atatgcctggctccctgtatgcca 28
>41731_bdi-MIR160a:mirbase
Length = 175
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 26 atatgcctggctccctgtatgcca 49
||||||||||||||||||||||||
Sbjct: 29 atatgcctggctccctgtatgcca 52
>41088_tcc-MIR160b:mirbase
Length = 120
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgccat 50
||||||||||||||||||||||||
Sbjct: 19 tatgcctggctccctgtatgccat 42
>42706_zma-MIR160f:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 atatgcctggctccctgtatgcc 48
|||||||||||||||||||||||
Sbjct: 18 atatgcctggctccctgtatgcc 40
>41927_osa-MIR160e:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 26 atatgcctggctccctgtatgcc 48
|||||||||||||||||||||||
Sbjct: 8 atatgcctggctccctgtatgcc 30
>41576_vvi-MIR160d:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 28 atgcctggctccctgtatgccat 50
|||||||||||||||||||||||
Sbjct: 10 atgcctggctccctgtatgccat 32
>41308_ptc-MIR160d:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>41305_ptc-MIR160a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 9 tatgcctggctccctgtatgcca 31
>40340_rco-MIR160b:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 4 tatgcctggctccctgtatgcca 26
>40021_ath-MIR160c:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 3 tatgcctggctccctgtatgcca 25
>39809_aly-MIR160c:mirbase
Length = 119
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 27 tatgcctggctccctgtatgcca 49
|||||||||||||||||||||||
Sbjct: 22 tatgcctggctccctgtatgcca 44
>42707_zma-MIR160g:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 28 atgcctggctccctgtatgcca 49
||||||||||||||||||||||
Sbjct: 1 atgcctggctccctgtatgcca 22
>41869_far-MIR160:mirbase
Length = 148
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 28 atgcctggctccctgtatgcca 49
||||||||||||||||||||||
Sbjct: 52 atgcctggctccctgtatgcca 73
>41166_aqc-MIR160b:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccat 22
>40661_mtr-MIR160d:mirbase
Length = 91
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
>40658_mtr-MIR160:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgccat 42
>40339_rco-MIR160a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
>39731_smo-MIR160a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>39375_pab-MIR160b:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgccat 50
||||||||||||||||||||||
Sbjct: 20 tgcctggctccctgtatgccat 41
>42703_zma-MIR160c:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>42702_zma-MIR160b:mirbase
Length = 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>42701_zma-MIR160a:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30
>42677_ttu-MIR160:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>42500_sbi-MIR160e:mirbase
Length = 95
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42499_sbi-MIR160d:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42498_sbi-MIR160c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42497_sbi-MIR160b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>42496_sbi-MIR160a:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>41925_osa-MIR160c:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>41924_osa-MIR160b:mirbase
Length = 139
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>41923_osa-MIR160a:mirbase
Length = 88
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>41734_bdi-MIR160d:mirbase
Length = 150
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41733_bdi-MIR160c:mirbase
Length = 148
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41732_bdi-MIR160b:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 31 tgcctggctccctgtatgcca 51
>41575_vvi-MIR160c:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>40020_ath-MIR160b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>39808_aly-MIR160b:mirbase
Length = 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>39732_smo-MIR160b:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>39460_ppt-MIR160f:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>39459_ppt-MIR160e:mirbase
Length = 138
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>39455_ppt-MIR160a:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>39374_pab-MIR160a:mirbase
Length = 106
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 29 tgcctggctccctgtatgcca 49
|||||||||||||||||||||
Sbjct: 14 tgcctggctccctgtatgcca 34
