miRNEST 2.0, an integrative microRNA resource :: BLAST
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 69.9 bits (35), Expect = 4e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctgagaa 45
|||||||||||||||||||||||||||||||||||
Sbjct: 24 ctggaggcagcggttcatcgatctcttcctgagaa 58
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 91 gatcgataaacctctgcatccagcg 115
|||||||||||||||||||||||||
Sbjct: 92 gatcgataaacctctgcatccagcg 116
>40024_ath-MIR162a:mirbase
Length = 140
Score = 69.9 bits (35), Expect = 4e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 77 taaaagcatgaacagatcgataaacctctgcatccagcg 115
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 73 taaaagcatgaatagatcgataaacctctgcatccagcg 111
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 gtgacagttgctggaggcagcggttcatcgatctcttcctg 41
|||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 15 gtgagagtcgctggaggcagcggttcatcgatctcttcctg 55
>39812_aly-MIR162a:mirbase
Length = 228
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 78 aaaagcatgaacagatcgataaacctctgcatccagcg 115
||||||||||| ||||||||||||||||||||||||||
Sbjct: 121 aaaagcatgaatagatcgataaacctctgcatccagcg 158
Score = 65.9 bits (33), Expect = 6e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 1 gtgacagttgctggaggcagcggttcatcgatctcttcctg 41
|||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 58 gtgagagtcgctggaggcagcggttcatcgatctcttcctg 98
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||
Sbjct: 11 ctggaggcagcggttcatcgatctcttcctg 41
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 78 aaaagcatgaacagatcgataaacctctgcatccagcg 115
|||| ||||||| |||||||||||||||||||||||||
Sbjct: 63 aaaaacatgaaccgatcgataaacctctgcatccagcg 100
>41090_tcc-MIR162:mirbase
Length = 131
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||
Sbjct: 21 ctggaggcagcggttcatcgatctcttcctg 51
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 91 gatcgataaacctctgcatccag 113
|||||||||||||||||||||||
Sbjct: 89 gatcgataaacctctgcatccag 111
>40342_rco-MIR162:mirbase
Length = 101
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||
Sbjct: 4 ctggaggcagcggttcatcgatctcttcctg 34
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 71 aaaaattaaaagcatgaacagatcgataaacctctgcatccagcg 115
|||||| ||| ||||||| |||||||||||||||||||||||||
Sbjct: 54 aaaaataaaacgcatgaatcgatcgataaacctctgcatccagcg 98
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 61.9 bits (31), Expect = 1e-10
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctg 41
|||||||||||||||||||||||||||||||
Sbjct: 13 ctggaggcagcggttcatcgatctcttcctg 43
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 91 gatcgataaacctctgcatccagcg 115
|||||||||||||||||||||||||
Sbjct: 78 gatcgataaacctctgcatccagcg 102
>39813_aly-MIR162b:mirbase
Length = 184
Score = 60.0 bits (30), Expect = 4e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 78 aaaagcatgaacagatcgataaacctctgcatccagcg 115
||||||||||| |||||||||||||||||||||||||
Sbjct: 98 aaaagcatgaatcgatcgataaacctctgcatccagcg 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 gctggaggcagcggttcatcgatc 33
||||||||||||||||||||||||
Sbjct: 49 gctggaggcagcggttcatcgatc 72
>41578_vvi-MIR162:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
||||| ||||||||||||||||||||||||||
Sbjct: 9 ctggatgcagcggttcatcgatctcttcctga 40
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 93 tcgataaacctctgcatccagcg 115
|||||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatccagcg 95
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
|||||||||||||||||||||||| |||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctga 42
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 86 gaacagatcgataaacctctgcatccag 113
|||| |||||||||||||||||||||||
Sbjct: 71 gaaccgatcgataaacctctgcatccag 98
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
|||||||||||||||||||||||| |||||||
Sbjct: 11 ctggaggcagcggttcatcgatcttttcctga 42
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 86 gaacagatcgataaacctctgcatccag 113
|||| |||||||||||||||||||||||
Sbjct: 71 gaaccgatcgataaacctctgcatccag 98
>40437_gma-MIR162:mirbase
Length = 102
Score = 56.0 bits (28), Expect = 6e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
||||| ||||||||||||||||||||||||||
Sbjct: 10 ctggatgcagcggttcatcgatctcttcctga 41
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 91 gatcgataaacctctgcatccagcg 115
|||||||||||||||||||||||||
Sbjct: 71 gatcgataaacctctgcatccagcg 95
>40025_ath-MIR162b:mirbase
Length = 111
Score = 52.0 bits (26), Expect = 1e-07
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 78 aaaagcatgaacagatcgataaacctctgcatccagcg 115
||||||| ||| |||||||||||||||||||||||||
Sbjct: 64 aaaagcaagaatcgatcgataaacctctgcatccagcg 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 10 gctggaggcagcggttcatcgatc 33
||||||||||||||||||||||||
Sbjct: 11 gctggaggcagcggttcatcgatc 34
>41220_csi-MIR162:mirbase
Length = 201
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 91 gatcgataaacctctgcatccagcg 115
|||||||||||||||||||||||||
Sbjct: 159 gatcgataaacctctgcatccagcg 183
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatc 33
|||||||||||||||||||||||
Sbjct: 89 ctggaggcagcggttcatcgatc 111
>40663_mtr-MIR162:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 11 ctggaggcagcggttcatcgatctcttcctga 42
||||| |||||||||||||||||| |||||||
Sbjct: 21 ctggatgcagcggttcatcgatctgttcctga 52
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 93 tcgataaacctctgcatccagcg 115
|||||||||||||||||||||||
Sbjct: 87 tcgataaacctctgcatccagcg 109
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 86 gaacagatcgataaacctctgcatccag 113
|||||||||||| |||| ||||||||||
Sbjct: 48 gaacagatcgatgaaccgctgcatccag 21
>42502_sbi-MIR162:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 91 gatcgataaacctctgcatccag 113
|||||||||||||||||||||||
Sbjct: 105 gatcgataaacctctgcatccag 127
>41929_osa-MIR162a:mirbase
Length = 171
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 91 gatcgataaacctctgcatccag 113
|||||||||||||||||||||||
Sbjct: 141 gatcgataaacctctgcatccag 163
>42708_zma-MIR162:mirbase
Length = 130
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 tcgataaacctctgcatccag 113
|||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatccag 130
>41736_bdi-MIR162:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 91 gatcgataaacctctgcatcc 111
|||||||||||||||||||||
Sbjct: 109 gatcgataaacctctgcatcc 129
>41530_sly-MIR162:mirbase
Length = 99
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 93 tcgataaacctctgcatccag 113
|||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatccag 99
