miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;ABXC01000332.1/159241-159126 4558:Sorghum bicolor
(sorghum)
Length = 116
Score = 83.8 bits (42), Expect = 6e-16
Identities = 91/106 (85%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 26 tccctccgttccaaattattagtcgttctggcttttctaggtatattgttttttgctatg 85
||||||| ||||||| ||| || | || |||||||||||| ||| ||| |||| |||||
Sbjct: 8 tccctccattccaaaatataagacattttggcttttctagatatgttgatttta-ctatg 66
Query: 86 tatctagaaaagccaaaaagacttataatttggaatggatggagta 131
|||||||||||| ||||| | |||||||||||||||||| ||||||
Sbjct: 67 tatctagaaaagacaaaatgtcttataatttggaatggagggagta 112
Score = 54.0 bits (27), Expect = 6e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 86 tatctagaaaagccaaaaagacttataatttggaatgga 124
|||||||||||||||||| | |||||| |||||||||||
Sbjct: 50 tatctagaaaagccaaaatgtcttatattttggaatgga 12
>RF00906;MIR1122;ABXC01001887.1/109652-109767 4558:Sorghum bicolor
(sorghum)
Length = 116
Score = 81.8 bits (41), Expect = 2e-15
Identities = 93/109 (85%), Gaps = 1/109 (0%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaattattagtcgttctggcttttctaggtatattgttttttgct 82
|||||||||| ||||||||| | |||| || |||||| |||||||| || | |||| |||
Sbjct: 112 tactccctccattccaaattgtaagtcattttggcttctctaggtacatagctttt-gct 54
Query: 83 atgtatctagaaaagccaaaaagacttataatttggaatggatggagta 131
||| | ||||||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 53 atgcacctagaaaagccaaaacaacttacaatttggaatggagggagta 5
Score = 69.9 bits (35), Expect = 9e-12
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 80 gctatgtatctagaaaagccaaaaagacttataatttggaatggatggagtatat 134
|||||||| ||||| ||||||||| |||||| ||||||||||||| |||||||||
Sbjct: 61 gctatgtacctagagaagccaaaatgacttacaatttggaatggagggagtatat 115
>RF00906;MIR1122;ABXC01000087.1/99966-100106 4558:Sorghum bicolor
(sorghum)
Length = 141
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 23 tactccctccgttccaaattattagtcgttctggcttttctag 65
|||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgttccaaattataagtcgttctggcttttctag 47
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 87 atctagaaaagccaaaaagacttataatttggaatggatggagtat 132
|||||||||||||| || |||||||||||||||| ||| |||||||
Sbjct: 49 atctagaaaagccagaacgacttataatttggaacggagggagtat 4
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 82 tatgtatctagaaaagccaaaaagacttataatttggaatggatggagta 131
||||||| ||||||||| | || || ||||||||||||||||| ||||||
Sbjct: 88 tatgtatatagaaaagcaagaatgaattataatttggaatggagggagta 137
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaattattagtcgttctggcttttcta 64
|||||||||| ||||||||||| | || |||| |||||||||
Sbjct: 137 tactccctccattccaaattataattcattcttgcttttcta 96
>RF00906;MIR1122;ABXC01000088.1/175772-175619 4558:Sorghum bicolor
(sorghum)
Length = 154
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 83 atgtatctagaaaagccaaaaagacttataatttggaatgga 124
||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 53 atgtatctagaaaagccaaaacgtcttataatttggaatgga 12
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 80 gctatgtatctagaaaagccaaaaagacttataatttggaatggatggagtata 133
||||||||||||| |||||||||| | |||||||||||| ||||| ||||||||
Sbjct: 99 gctatgtatctagtaaagccaaaatgtcttataatttgggatggagggagtata 152
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 26 tccctccgttccaaattattagtcgttctggcttttctag 65
||||||| ||||||||||| || |||| ||||||||||||
Sbjct: 8 tccctccattccaaattataagacgttttggcttttctag 47
>RF00906;MIR1122;ABXC01000872.1/103457-103600 4558:Sorghum bicolor
(sorghum)
Length = 144
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 80 gctatgtatctagaaaagccaaaaagacttataatttggaatgg 123
|||| ||||||||||||||||||| | |||||||||||||||||
Sbjct: 56 gctacgtatctagaaaagccaaaacgtcttataatttggaatgg 13
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 83 atgtatctagaaaagccaaaaagacttataatttggaatggatggagta 131
|||||| |||||||||||||| | |||||| ||||||||||| ||||||
Sbjct: 92 atgtatttagaaaagccaaaatgtcttatagtttggaatggagggagta 140
>RF00906;MIR1122;ABXC01006238.1/21919-22080 4558:Sorghum bicolor
(sorghum)
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 87 atctagaaaagccaaaaagacttataatttggaatggatggagtat 132
|||||||||| |||||| | |||||||||||||||||| |||||||
Sbjct: 114 atctagaaaacccaaaacgtcttataatttggaatggagggagtat 159
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 83 atgtatctagaaaagccaaaaagacttataatttggaatggatggagta 131
||||||||||||||||||||| | |||||||| ||||| ||| ||||||
Sbjct: 53 atgtatctagaaaagccaaaacgtcttataatgtggaacggagggagta 5
Score = 56.0 bits (28), Expect = 1e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 23 tactccctccgttccaaattattagtcgttctggcttttctaggtatattgttttt 78
|||||||||||||||| ||||| || |||| |||||||||||| || ||| |||||
Sbjct: 5 tactccctccgttccacattataagacgttttggcttttctagatacattattttt 60
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaattattagtcgttctggcttttctag 65
|||||||||| ||||||||||| || |||| ||| ||||||||
Sbjct: 158 tactccctccattccaaattataagacgttttgggttttctag 116
>RF00906;MIR1122;ABXC01006108.1/73971-74122 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 19 gttctactccctccgttccaaattattagtcgttctggctt 59
|||||||||||||||||||||||| | ||||||| ||||||
Sbjct: 1 gttctactccctccgttccaaattgtaagtcgttttggctt 41
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 80 gctatgtatctagaaaagccaaaaagactt 109
|||||||||||| ||||||||||| |||||
Sbjct: 97 gctatgtatctaaaaaagccaaaacgactt 126
>RF00906;MIR1122;ABXC01000098.1/126393-126501 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 83 atgtatctagaaaagccaaaaagacttataatttggaatggatggagta 131
||||||||||||||||||||| | || ||||||||| ||||| ||||||
Sbjct: 53 atgtatctagaaaagccaaaacgtctcataatttgggatggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 23 tactccctccgttccaaattattagtcgttctggcttttctag 65
|||||||||| | ||||||||| || |||| ||||||||||||
Sbjct: 5 tactccctccatcccaaattatgagacgttttggcttttctag 47
>RF00906;MIR1122;AY761662.1/398-280 4558:Sorghum bicolor (sorghum)
Length = 119
Score = 56.0 bits (28), Expect = 1e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 82 tatgtatctagaaaagccaaaaagacttataatttggaatggatggag 129
||||||||||||||| |||||| ||| |||||||||| ||||| ||||
Sbjct: 66 tatgtatctagaaaaaccaaaacgacctataatttgggatggagggag 113
>RF00906;MIR1122;ABXC01006511.1/264469-264340 4558:Sorghum bicolor
(sorghum)
Length = 130
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 81 ctatgtatctagaaaagccaaaaagacttataattt 116
||||||||||||||||||||||| | ||||||||||
Sbjct: 76 ctatgtatctagaaaagccaaaatgtcttataattt 111
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 106 acttataatttggaatggatggagta 131
||||||||||||||||||| ||||||
Sbjct: 30 acttataatttggaatggagggagta 5
>RF00906;MIR1122;ABXC01001510.1/32715-32871 4558:Sorghum bicolor
(sorghum)
Length = 157
Score = 54.0 bits (27), Expect = 6e-07
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaattattagtcgttctggcttttctaggtatattgttttttgct 82
|||||||||||||||||| ||| || |||| |||| ||||||| || ||| |||||| ||
Sbjct: 153 tactccctccgttccaaactataagacgttttggc-tttctagatacatt-ttttttact 96
Query: 83 atgtatctaga 93
|||||||||||
Sbjct: 95 atgtatctaga 85
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 85 gtatctagaaaagccaaaaagacttataatttgga 119
||||| ||||||||||||| | |||||||||||||
Sbjct: 51 gtatcaagaaaagccaaaatgtcttataatttgga 17
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 22 ctactccctccgttccaaattattagtcgttctggcttttct 63
|||||||||||| |||||||||| || | || ||||||||||
Sbjct: 4 ctactccctccggtccaaattataagacattttggcttttct 45
>RF00906;MIR1122;ABXC01001482.1/21413-21536 4558:Sorghum bicolor
(sorghum)
Length = 124
Score = 54.0 bits (27), Expect = 6e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 90 tagaaaagccaaaaagacttataatttggaatggatggagtat 132
|||||||||||||| | |||| ||||||||||||| |||||||
Sbjct: 46 tagaaaagccaaaacgtcttacaatttggaatggagggagtat 4
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 107 cttataatttggaatggatggagta 131
|||||||||||||||||||||||||
Sbjct: 96 cttataatttggaatggatggagta 120
Score = 44.1 bits (22), Expect = 5e-04
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 23 tactccctccgttccaaattattagtcgttctggcttttcta 64
|||||||||| ||||||||| | || |||| |||||||||||
Sbjct: 5 tactccctccattccaaattgtaagacgttttggcttttcta 46
>RF00906;MIR1122;ABXC01002481.1/9459-9348 4558:Sorghum bicolor
(sorghum)
Length = 112
Score = 52.0 bits (26), Expect = 2e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 21 tctactccctccgttccaaattattagtcgttctggcttttctaggtatattgttttt 78
|||||||||||||||||||||| | || ||| |||||||||||| || |||| ||||
Sbjct: 3 tctactccctccgttccaaattgtaagatgttttggcttttctagatacattgctttt 60
Score = 50.1 bits (25), Expect = 9e-06
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 83 atgtatctagaaaagccaaaaagacttataatttggaatggatggagta 131
||||||||||||||||||||| |||| ||||||||| ||| ||||||
Sbjct: 53 atgtatctagaaaagccaaaacatcttacaatttggaacggagggagta 5
>RF00906;MIR1122;ABXC01000869.1/217-331 4558:Sorghum bicolor
(sorghum)
Length = 115
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaattattagtcgttctggcttt 60
|||||||||||||||||||||| || |||| |||||||
Sbjct: 111 tactccctccgttccaaattataagacgttttggcttt 74
Score = 48.1 bits (24), Expect = 3e-05
Identities = 46/52 (88%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 80 gctatgtatctagaaaagccaaaaagacttataatttggaatggatggagta 131
|||||| ||||||||| ||||||| | |||||||||||||| ||| ||||||
Sbjct: 61 gctatgaatctagaaa-gccaaaacgtcttataatttggaacggagggagta 111
>RF00906;MIR1122;ABXC01002915.1/67233-67385 4558:Sorghum bicolor
(sorghum)
Length = 153
Score = 52.0 bits (26), Expect = 2e-06
Identities = 44/50 (88%)
Strand = Plus / Minus
Query: 83 atgtatctagaaaagccaaaaagacttataatttggaatggatggagtat 132
||||||||||||||| ||||| | ||||||||||||| ||| |||||||
Sbjct: 53 atgtatctagaaaagtcaaaatgtcttataatttggagcggagggagtat 4
>RF00906;MIR1122;ABXC01005719.1/52257-52354 4558:Sorghum bicolor
(sorghum)
Length = 98
Score = 52.0 bits (26), Expect = 2e-06
Identities = 41/46 (89%)
Strand = Plus / Plus
Query: 22 ctactccctccgttccaaattattagtcgttctggcttttctaggt 67
|||||||||||||||||| ||| || |||| ||||||||||||||
Sbjct: 4 ctactccctccgttccaacttacaagccgttatggcttttctaggt 49
>RF00906;MIR1122;ABXC01004300.1/32074-32218 4558:Sorghum bicolor
(sorghum)
Length = 145
Score = 52.0 bits (26), Expect = 2e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 80 gctatgtatctagaaaagccaaaaagacttataatttggaat 121
||||||||||||||||||||| || | |||| ||||||||||
Sbjct: 90 gctatgtatctagaaaagccagaatggcttacaatttggaat 131
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 22 ctactccctccgttccaaattattagtcgttct 54
||||||||||||||||||||| | |||||||||
Sbjct: 4 ctactccctccgttccaaattgtaagtcgttct 36
>RF00906;MIR1122;ABXC01003678.1/89613-89769 4558:Sorghum bicolor
(sorghum)
Length = 157
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 23 tactccctccgttccaaattattagtcgtt 52
|||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgttccaaattataagtcgtt 34
>RF00906;MIR1122;ABXC01000415.1/124553-124445 4558:Sorghum bicolor
(sorghum)
Length = 109
Score = 50.1 bits (25), Expect = 9e-06
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 22 ctactccctccgttccaaattattagtcgttctggcttttc 62
|||||| |||||||||||||||| || |||| |||||||||
Sbjct: 4 ctactctctccgttccaaattataagacgttttggcttttc 44
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 22 ctactccctccgttccaaattattagtcgttctggct 58
||||||||||||||||||||||| || |||| |||||
Sbjct: 106 ctactccctccgttccaaattataagacgttttggct 70
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 86 tatctagaaaagccaaaaagacttataatttggaa 120
||||| |||||||||||| | ||||||||||||||
Sbjct: 50 tatctggaaaagccaaaacgtcttataatttggaa 16
>RF00906;MIR1122;ABXC01006180.1/72632-72485 4558:Sorghum bicolor
(sorghum)
Length = 148
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 87 atctagaaaagccaaaaagacttataatttggaatggatggagta 131
|||||||||| |||||| | |||||||||||||| ||| ||||||
Sbjct: 100 atctagaaaaaccaaaatgtcttataatttggaacggagggagta 144
Score = 46.1 bits (23), Expect = 1e-04
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 81 ctatgtatctagaaaagccaaaaagacttataatttggaatggatggagta 131
||||||||||||||| ||||||| |||| ||||||||| ||| ||||||
Sbjct: 55 ctatgtatctagaaatgccaaaacaccttacaatttggaacggagggagta 5
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaattattagtcgttctggcttttctag 65
|||||||||||||||||||||| || | || ||| ||||||||
Sbjct: 144 tactccctccgttccaaattataagacattttggtttttctag 102
>RF00906;MIR1122;ABXC01000646.1/88636-88479 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 22 ctactccctccgttccaaattattagtcg 50
||||||||||||||||||||||| |||||
Sbjct: 155 ctactccctccgttccaaattataagtcg 127
Score = 46.1 bits (23), Expect = 1e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 105 gacttataatttggaatggatggagta 131
|||||||||||||||| ||||||||||
Sbjct: 31 gacttataatttggaacggatggagta 5
>RF00906;MIR1122;AF459639.1/191055-190921 4568:Triticum monococcum
Length = 135
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 19 gttctactccctccgttccaaatta 43
|||||||||||||||||||||||||
Sbjct: 135 gttctactccctccgttccaaatta 111
>RF00906;MIR1122;ABXC01003117.1/17769-17632 4558:Sorghum bicolor
(sorghum)
Length = 138
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 23 tactccctccgttccaaattattagtcg 50
|||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgttccaaattataagtcg 32
>RF00906;MIR1122;ABXC01001527.1/885-965 4558:Sorghum bicolor
(sorghum)
Length = 81
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 22 ctactccctccgttccaaattattagtc 49
||||||||||||||||||||||| ||||
Sbjct: 4 ctactccctccgttccaaattataagtc 31
>RF00906;MIR1122;ABXC01006544.1/387099-387256 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaattattagtcg 50
|||||||||||||||||||||| |||||
Sbjct: 154 tactccctccgttccaaattataagtcg 127
>RF00906;MIR1122;ABXC01002751.1/4300-4149 4558:Sorghum bicolor
(sorghum)
Length = 152
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 23 tactccctccgttccaaattattagtcg 50
|||||||||||||||||||||| |||||
Sbjct: 5 tactccctccgttccaaattataagtcg 32
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 23 tactccctccgttccaaattat 44
||||||||||||||||||||||
Sbjct: 148 tactccctccgttccaaattat 127
>RF00906;MIR1122;ABXC01000255.1/62068-61965 4558:Sorghum bicolor
(sorghum)
Length = 104
Score = 48.1 bits (24), Expect = 3e-05
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 96 agccaaaaagacttataatttggaatggatggagta 131
|||||||| | |||||||||||||||||| ||||||
Sbjct: 40 agccaaaacgtcttataatttggaatggagggagta 5
Score = 48.1 bits (24), Expect = 3e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 81 ctatgtatctagaaaagccaaaaagacttataatttggaa 120
||||| || |||||||||||||| | ||||||||||||||
Sbjct: 41 ctatgaatttagaaaagccaaaacgtcttataatttggaa 80
>RF00906;MIR1122;ABXC01002366.1/89795-89952 4558:Sorghum bicolor
(sorghum)
Length = 158
Score = 48.1 bits (24), Expect = 3e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 22 ctactccctccgttccaaattattagtc 49
||||||||||||||||||||||| ||||
Sbjct: 155 ctactccctccgttccaaattataagtc 128
>RF00906;MIR1122;AB298184.1/15044-14931 4565:Triticum aestivum
(bread wheat)
Length = 114
Score = 48.1 bits (24), Expect = 3e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 20 ttctactccctccgttccaaatta 43
||||||||||||||||||||||||
Sbjct: 113 ttctactccctccgttccaaatta 90
>RF00906;MIR1122;ABXC01002968.1/30248-30403 4558:Sorghum bicolor
(sorghum)
Length = 156
Score = 46.1 bits (23), Expect = 1e-04
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 ctactccctccgttccaaattat 44
|||||||||||||||||||||||
Sbjct: 4 ctactccctccgttccaaattat 26
>RF00906;MIR1122;ABXC01002870.1/113864-113706 4558:Sorghum bicolor
(sorghum)
Length = 159
Score = 46.1 bits (23), Expect = 1e-04
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 23 tactccctccgttccaaattattagtcgttctggcttttctag 65
||||||||| ||| |||||||| || |||| ||||||||||||
Sbjct: 5 tactccctctgtttcaaattataagacgttttggcttttctag 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 87 atctagaaaagccaaaaagacttataatttg 117
||||||||||||||||| | |||||||||||
Sbjct: 49 atctagaaaagccaaaacgtcttataatttg 19
>RF00906;MIR1122;ABXC01004672.1/95113-95007 4558:Sorghum bicolor
(sorghum)
Length = 107
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Minus
Query: 80 gctatgtatctagaaaagccaaaaagactta 110
|||||||| ||||||||||||||| ||||||
Sbjct: 31 gctatgtacctagaaaagccaaaacgactta 1
>RF00906;MIR1122;ABXC01002486.1/98513-98357 4558:Sorghum bicolor
(sorghum)
Length = 157
Score = 44.1 bits (22), Expect = 5e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 105 gacttataatttggaatggatggagtatat 134
|||||||||||| ||||||| |||||||||
Sbjct: 127 gacttataatttagaatggagggagtatat 156
>RF00906;MIR1122;ABXC01001279.1/17843-17947 4558:Sorghum bicolor
(sorghum)
Length = 105
Score = 44.1 bits (22), Expect = 5e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 106 acttataatttggaatggatggagta 131
||||||||||||||||||| ||||||
Sbjct: 76 acttataatttggaatggagggagta 101
>RF00906;MIR1122;FJ184989.1/974-892 4565:Triticum aestivum (bread
wheat)
Length = 83
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 ctactccctccgttccaaatta 43
||||||||||||||||||||||
Sbjct: 4 ctactccctccgttccaaatta 25
>RF00906;MIR1122;DQ123819.1/2832-2966 4571:Triticum turgidum
Length = 135
Score = 44.1 bits (22), Expect = 5e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 22 ctactccctccgttccaaatta 43
||||||||||||||||||||||
Sbjct: 132 ctactccctccgttccaaatta 111
