miRNEST 2.0, an integrative microRNA resource :: BLAST
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 93.7 bits (47), Expect = 3e-20
Identities = 50/51 (98%)
Strand = Plus / Plus
Query: 3 ttcaagtccatgccatgcctttccacagctttcttgaacttcttctcctcc 53
||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1 ttcaagtccatgccatgcctttccacagctttcttgaacttctcctcctcc 51
Score = 85.7 bits (43), Expect = 8e-18
Identities = 43/43 (100%)
Strand = Plus / Plus
Query: 101 aagaaggtcaagaaagctgtgggaagaaatgacataacaagga 143
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 aagaaggtcaagaaagctgtgggaagaaatgacataacaagga 162
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 7 agtccatgccatgcctttccacagctttcttgaacttc 44
|||||||||||| |||||||||||||||||||||||||
Sbjct: 16 agtccatgccattcctttccacagctttcttgaacttc 53
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 106 ggtcaagaaagctgtgggaagaaatgacataacaaggact 145
|||||||||||||||||||||||||| |||||| ||||||
Sbjct: 143 ggtcaagaaagctgtgggaagaaatggcataaccaggact 182
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 67.9 bits (34), Expect = 2e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 13 tgccatgcctttccacagctttcttgaacttcttctcc 50
|||||||| |||||||||||||||||||||||||||||
Sbjct: 4 tgccatgcttttccacagctttcttgaacttcttctcc 41
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 25 ccacagctttcttgaacttc 44
||||||||||||||||||||
Sbjct: 95 ccacagctttcttgaacttc 76
>42028_osa-MIR396c:mirbase
Length = 141
Score = 65.9 bits (33), Expect = 8e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 13 tgccatgcctttccacagctttcttgaacttct 45
|||||||||||||||||||||||||||||||||
Sbjct: 1 tgccatgcctttccacagctttcttgaacttct 33
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 100 gaagaaggtcaagaaagctgtgggaagaaatg 131
||||| ||||||||||||||||||||||||||
Sbjct: 107 gaagagggtcaagaaagctgtgggaagaaatg 138
>42812_zma-MIR396f:mirbase
Length = 117
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 22 tttccacagctttcttgaacttcttct 48
|||||||||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaacttcttct 27
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 103 gaaggtcaagaaagctgtgggaaga 127
|||||||||||||||||||||||||
Sbjct: 93 gaaggtcaagaaagctgtgggaaga 117
>42811_zma-MIR396e:mirbase
Length = 166
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 22 tttccacagctttcttgaacttcttct 48
|||||||||||||||||||||||||||
Sbjct: 1 tttccacagctttcttgaacttcttct 27
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 99 cgaagaaggtcaagaaagctgtgggaaga 127
||||||||||||||||||| |||||||||
Sbjct: 138 cgaagaaggtcaagaaagccgtgggaaga 166
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 16 catgcctttccacagctttcttgaacttctt 46
||||| |||||||||||||||||||||||||
Sbjct: 4 catgcttttccacagctttcttgaacttctt 34
>40476_gma-MIR396d:mirbase
Length = 108
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 16 catgcctttccacagctttcttgaacttctt 46
||||| |||||||||||||||||||||||||
Sbjct: 4 catgcttttccacagctttcttgaacttctt 34
>40474_gma-MIR396b:mirbase
Length = 126
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 16 catgcctttccacagctttcttgaacttctt 46
||||| |||||||||||||||||||||||||
Sbjct: 14 catgcttttccacagctttcttgaacttctt 44
>40379_rco-MIR396:mirbase
Length = 124
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 22 tttccacagctttcttgaacttcttct 48
|||||||||||||||||||||||||||
Sbjct: 5 tttccacagctttcttgaacttcttct 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 ccacagctttcttgaacttcttct 48
||||||||||||||||||| ||||
Sbjct: 115 ccacagctttcttgaacttattct 92
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 14 gccatgcctttccacagctttcttgaactt 43
||||||| ||||||||||||||||||||||
Sbjct: 12 gccatgcttttccacagctttcttgaactt 41
>40475_gma-MIR396c:mirbase
Length = 117
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 17 atgcctttccacagctttcttgaacttctt 46
|||| |||||||||||||||||||||||||
Sbjct: 15 atgcttttccacagctttcttgaacttctt 44
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 catgcctttccacagctttcttgaacttc 44
||||| |||||||||||||||||||||||
Sbjct: 4 catgcttttccacagctttcttgaacttc 32
>41243_csi-MIR396c:mirbase
Length = 178
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 tttccacagctttcttgaacttctt 46
|||||||||||||||||||||||||
Sbjct: 12 tttccacagctttcttgaacttctt 36
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 102 agaaggtcaagaaagctgtgggaagaaatg 131
||||| |||||||| |||||||||||||||
Sbjct: 144 agaagttcaagaaatctgtgggaagaaatg 173
>41212_ccl-MIR396:mirbase
Length = 277
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 catgcctttccacagctttcttgaacttc 44
||||| |||||||||||||||||||||||
Sbjct: 136 catgcttttccacagctttcttgaacttc 164
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 22 tttccacagctttcttgaacttctt 46
|||||||||||||||||||||||||
Sbjct: 5 tttccacagctttcttgaacttctt 29
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 13 tgccatgcctttccacagctttcttgaacttc 44
||||||| |||||||||||||||||||||||
Sbjct: 1 tgccatgtttttccacagctttcttgaacttc 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 23 ttccacagctttcttgaacttctt 46
|||||| |||||||||||||||||
Sbjct: 94 ttccacggctttcttgaacttctt 71
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 16 catgcctttccacagctttcttgaact 42
||||| |||||||||||||||||||||
Sbjct: 7 catgcttttccacagctttcttgaact 33
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaacttct 45
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttct 43
Score = 44.1 bits (22), Expect = 3e-05
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 16 catgcctttccacagctttcttgaacttct 45
||||| ||||||| ||||||||||||||||
Sbjct: 131 catgcttttccacggctttcttgaacttct 102
>39878_aly-MIR396b:mirbase
Length = 188
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 100 gaagaaggtcaagaaagctgtgggaagaaatgaca 134
||||||| |||||||||||||||||| | ||||||
Sbjct: 129 gaagaagctcaagaaagctgtgggaaaacatgaca 163
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tttccacagctttcttgaactt 43
||||||||||||||||||||||
Sbjct: 31 tttccacagctttcttgaactt 52
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 25 ccacagctttcttgaacttcttct 48
||||||||||||||| ||||||||
Sbjct: 151 ccacagctttcttgagcttcttct 128
>40086_ath-MIR396b:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tttccacagctttcttgaactt 43
||||||||||||||||||||||
Sbjct: 10 tttccacagctttcttgaactt 31
Score = 40.1 bits (20), Expect = 4e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 103 gaaggtcaagaaagctgtgggaagaaatgaca 134
|||| |||||||||||||||||| | ||||||
Sbjct: 104 gaagctcaagaaagctgtgggaaaacatgaca 135
>39426_pta-MIR396:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 22 tttccacagctttcttgaactt 43
||||||||||||||||||||||
Sbjct: 16 tttccacagctttcttgaactt 37
>41242_csi-MIR396b:mirbase
Length = 134
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tttccacagctttcttgaact 42
|||||||||||||||||||||
Sbjct: 19 tttccacagctttcttgaact 39
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaactt 43
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactt 21
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 tttccacagctttcttgaact 42
|||||||||||||||||||||
Sbjct: 20 tttccacagctttcttgaact 40
>40296_bna-MIR396a:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaactt 43
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactt 21
>39379_pab-MIR396a:mirbase
Length = 100
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 14 gccatgcctttccacagctttcttgaact 42
||||||| ||||||||||||||||||||
Sbjct: 7 gccatgctcttccacagctttcttgaact 35
>42814_zma-MIR396h:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaact 79
>42813_zma-MIR396g:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaact 92
>42808_zma-MIR396b:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42807_zma-MIR396a:mirbase
Length = 137
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42472_ssp-MIR396:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>42461_sof-MIR396:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42027_osa-MIR396b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>42026_osa-MIR396a:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41441_ptc-MIR396g:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 catgcctttccacagctttcttgaactt 43
||||| ||||||| ||||||||||||||
Sbjct: 4 catgcttttccacggctttcttgaactt 31
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41241_csi-MIR396a:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41141_tcc-MIR396d:mirbase
Length = 182
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 catgcctttccacagctttcttgaactt 43
||||| ||||||| ||||||||||||||
Sbjct: 14 catgcttttccacggctttcttgaactt 41
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40646_lja-MIR396:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
>40477_gma-MIR396e:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaact 26
>40473_gma-MIR396a:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40085_ath-MIR396a:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39877_aly-MIR396a:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 23 ttccacagctttcttgaact 42
||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaact 43
>39741_smo-MIR396:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 25 ccacagctttcttgaacttc 44
||||||||||||||||||||
Sbjct: 153 ccacagctttcttgaacttc 134
