miRNEST 2.0, an integrative microRNA resource :: BLAST
>54376_pvi-miR444:pmrd
Length = 127
Score = 196 bits (99), Expect = 3e-51
Identities = 119/126 (94%)
Strand = Plus / Plus
Query: 2 gcaaggggtggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttc 61
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaagcggcggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttc 60
Query: 62 gaaccataccgataattttcttgcangttgtgcagttgttgtctcaagcttgctgcctcc 121
|||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 agaccatacctatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcctcc 120
Query: 122 ctttgc 127
||||||
Sbjct: 121 ctttgc 126
>49007_osa-miR444f:pmrd
Length = 154
Score = 73.8 bits (37), Expect = 3e-14
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgcctcc 121
||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 110 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| |||||| |||||||| | |||||||||||
Sbjct: 145 caagcttgaggcaacaactgcacaacttgcaagaaa 110
>48798_oru-miR444:pmrd
Length = 165
Score = 73.8 bits (37), Expect = 3e-14
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgcctcc 121
||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 115 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 158
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| |||||| |||||||| | |||||||||||
Sbjct: 150 caagcttgaggcaacaactgcacaacttgcaagaaa 115
>54691_tae-miR444:pmrd
Length = 426
Score = 61.9 bits (31), Expect = 1e-10
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgcctccctttgc 127
||||||||| || |||||||| || ||||||||||||||||||||||||
Sbjct: 134 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcctccctttgc 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| |||||||||||||||| |||||||||||
Sbjct: 169 caagcttgaggcagcaactgcatgacttgcaagaaa 134
>54742_tae-miR2024a:pmrd
Length = 118
Score = 58.0 bits (29), Expect = 2e-09
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgcctcc 121
||||| ||| |||||||||||| |||||||||||||||| ||||
Sbjct: 75 tttctcgcaagttgtgcagttgctgtctcaagcttgctgactcc 118
>54743_tae-miR2024b:pmrd
Length = 142
Score = 50.1 bits (25), Expect = 4e-07
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 78 tttcttgcangttgtgcagttgttgtctcaagcttgctgcctcc 121
||||||||| || |||||||| || ||||||||||||||||||
Sbjct: 99 tttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcc 142
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcatatcttgcaagaaa 51
|||||| |||||||||||||||| |||||||||||
Sbjct: 134 caagcttgaggcagcaactgcatgacttgcaagaaa 99
>55114_zma-miR444a:pmrd
Length = 138
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 104 ctcaagcttgctgcctccctttgc 127
||||||||||||||||||||||||
Sbjct: 8 ctcaagcttgctgcctccctttgc 31
>49006_osa-miR444e:pmrd
Length = 140
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 17 aagctagaggcagcaactgcatatcttgcaagaaa 51
|||||||||||| |||||||||| ||||| |||||
Sbjct: 22 aagctagaggcaccaactgcataacttgcgagaaa 56
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 17 aagctagaggcagcaactgcatatcttgc 45
||||| ||||||||||||||||| |||||
Sbjct: 119 aagcttgaggcagcaactgcataacttgc 91
>55115_zma-miR444b:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 104 ctcaagcttgctgcctccctttgc 127
||||||||| ||||||||||||||
Sbjct: 8 ctcaagcttcctgcctccctttgc 31
>48319_bdi-miR444:pmrd
Length = 110
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 16 caagctagaggcagcaactgcata 39
|||||| |||||||||||||||||
Sbjct: 106 caagcttgaggcagcaactgcata 83
