miRNEST 2.0, an integrative microRNA resource :: BLAST
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 210 bits (106), Expect = 2e-55
Identities = 106/106 (100%)
Strand = Plus / Plus
Query: 19 caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggatca 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggatca 60
Query: 79 tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 124
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 106
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 186 bits (94), Expect = 3e-48
Identities = 104/106 (98%), Gaps = 1/106 (0%)
Strand = Plus / Plus
Query: 19 caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcaggatca 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1 caagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattgcagga-ca 59
Query: 79 tacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttg 124
||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 60 tacttgtggttttcttgcaagttgtgcagttgttgcctcaagcttg 105
>42089_osa-MIR444d:mirbase
Length = 143
Score = 168 bits (85), Expect = 7e-43
Identities = 128/140 (91%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 1 tattgcatatggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcaca 60
||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 4 tattgcacatggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcaca 63
Query: 61 aaatcaattgcaggatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaag 120
|||||| | | | ||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 64 aaatcattag-atgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaag 120
Query: 121 cttgctgcctccctttgcca 140
|||||||||||||| |||||
Sbjct: 121 cttgctgcctccctctgcca 140
Score = 56.0 bits (28), Expect = 7e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 82 ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 129
||||| ||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82
>42088_osa-MIR444d:mirbase
Length = 143
Score = 168 bits (85), Expect = 7e-43
Identities = 128/140 (91%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 1 tattgcatatggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcaca 60
||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 4 tattgcacatggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcaca 63
Query: 61 aaatcaattgcaggatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaag 120
|||||| | | | ||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 64 aaatcattag-atgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaag 120
Query: 121 cttgctgcctccctttgcca 140
|||||||||||||| |||||
Sbjct: 121 cttgctgcctccctctgcca 140
Score = 56.0 bits (28), Expect = 7e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 82 ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 129
||||| ||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82
>42087_osa-MIR444d:mirbase
Length = 143
Score = 168 bits (85), Expect = 7e-43
Identities = 128/140 (91%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 1 tattgcatatggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcaca 60
||||||| ||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 4 tattgcacatggtggcaccaagcatgaggcaacaactgcattacttgcaagaaaggcaca 63
Query: 61 aaatcaattgcaggatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaag 120
|||||| | | | ||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 64 aaatcattag-atgat--tacttgtggctttcttgcaagttgtgcagttgctgcctcaag 120
Query: 121 cttgctgcctccctttgcca 140
|||||||||||||| |||||
Sbjct: 121 cttgctgcctccctctgcca 140
Score = 56.0 bits (28), Expect = 7e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 82 ttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 129
||||| ||||||||||||| |||||||||||||||| ||||| ||||
Sbjct: 64 ttgtgcctttcttgcaagtaatgcagttgttgcctcatgcttggtgcc 17
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 129 ggcagcaagcttgaggcagcaactgcacaacttgcaagaaagccacaa 82
>42648_tae-MIR444:mirbase
Length = 426
Score = 103 bits (52), Expect = 3e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 77 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcccttt 136
|||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 122 catacttgtggctttcttgcaagtcatgcagttgctgcctcaagcttgctgcctcccttt 181
Query: 137 gcca 140
||||
Sbjct: 182 gcca 185
Score = 56.0 bits (28), Expect = 7e-09
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
|||| ||||| |||||||| |||||||| ||||||||||||| |||||
Sbjct: 174 ggcagcaagcttgaggcagcaactgcatgacttgcaagaaagccacaa 127
Score = 50.1 bits (25), Expect = 4e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 4 tgcatatggtggcaccaagcatgaggcaggaactgcattacttgc 48
||||| ||| |||||| ||||||||||| |||||||||||||||
Sbjct: 12 tgcatgtggcggcaccgagcatgaggcaacaactgcattacttgc 56
>42649_tae-MIR444b:mirbase
Length = 162
Score = 95.6 bits (48), Expect = 8e-21
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 77 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 132
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 98 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcctcc 153
Score = 50.1 bits (25), Expect = 4e-07
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 4 tgcatatggtggcaccaagcatgaggcaggaactgcattacttgc 48
||||| ||| |||||| ||||||||||| |||||||||||||||
Sbjct: 5 tgcatgtggcggcaccgagcatgaggcaacaactgcattacttgc 49
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 150 ggcagcaagcttgaggcagcaactgcacgacttgcaagaaagccacaa 103
>42084_osa-MIR444b:mirbase
Length = 138
Score = 95.6 bits (48), Expect = 8e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 89 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttgcca 140
||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgcca 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 89 tttcttgcaagttgtgcagttgttgcctcaagcttg 124
||||||||||| |||||||||| |||| ||||||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagcttg 18
>42083_osa-MIR444b:mirbase
Length = 138
Score = 95.6 bits (48), Expect = 8e-21
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 89 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttgcca 140
||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 86 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcctccctttgcca 137
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 89 tttcttgcaagttgtgcagttgttgcctcaagcttg 124
||||||||||| |||||||||| |||| ||||||||
Sbjct: 53 tttcttgcaagatgtgcagttgctgccacaagcttg 18
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 91.7 bits (46), Expect = 1e-19
Identities = 104/122 (85%), Gaps = 1/122 (0%)
Strand = Plus / Plus
Query: 11 ggtggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaaaatcaattg 70
||||||||||||||||||||| ||||||||||||| |||| |||| |||||||| | ||
Sbjct: 1 ggtggcaccaagcatgaggcaacaactgcattactttcaaggaagttacaaaatcta-tg 59
Query: 71 caggatcatacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcct 130
||||| | ||| ||||||||||||||||||||||| || ||||||||||||| ||
Sbjct: 60 ggtcttcataatcgtgactttcttgcaagttgtgcagttgctgtctcaagcttgctgact 119
Query: 131 cc 132
||
Sbjct: 120 cc 121
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 19 caagcatgaggcaggaactgcattacttgcaagaaagtcac 59
||||| |||| ||| ||||||| |||||||||||||||||
Sbjct: 113 caagcttgagacagcaactgcacaacttgcaagaaagtcac 73
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 91.7 bits (46), Expect = 1e-19
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 77 catacttgtggctttcttgcaagttgtgcagttgttgcctcaagcttgctgcct 130
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||
Sbjct: 61 catacttgtggctttcttgcaagtcgtgcagttgctgcctcaagcttgctgcct 114
Score = 48.1 bits (24), Expect = 2e-06
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtcacaa 61
|||| ||||| |||||||| ||||||| ||||||||||||| |||||
Sbjct: 113 ggcagcaagcttgaggcagcaactgcacgacttgcaagaaagccacaa 66
>42091_osa-MIR444f:mirbase
Length = 154
Score = 89.7 bits (45), Expect = 5e-19
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 88 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 132
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 ctttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 153
Score = 54.0 bits (27), Expect = 3e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 9 atggtggcaccaagcatgaggcaggaactgcattacttgcaag 51
||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 atggtggcaccaagcatgaggttacaactgcattacttgcaag 43
Score = 42.1 bits (21), Expect = 1e-04
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaaagtca 58
|||| ||||| ||||||| ||||||| ||||||||||||||||
Sbjct: 150 ggcagcaagcttgaggcaacaactgcacaacttgcaagaaagtca 106
>42086_osa-MIR444c:mirbase
Length = 138
Score = 89.7 bits (45), Expect = 5e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 89 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttgccag 141
||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgccag 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 89 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 132
||||||||||| | |||||||| || ||| ||||||| ||||||
Sbjct: 57 tttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>42085_osa-MIR444c:mirbase
Length = 138
Score = 89.7 bits (45), Expect = 5e-19
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 89 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctccctttgccag 141
||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 84 tttcttgcaagctgtgcagttgttgtctcaagcttgctgcctccctttgccag 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 89 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 132
||||||||||| | |||||||| || ||| ||||||| ||||||
Sbjct: 57 tttcttgcaagatatgcagttgctgtctctagcttgccgcctcc 14
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 89 tttcttgcaagttgtgcagttgttgcctcaagcttgctgcc 129
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 68 tttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 89 tttcttgcaagttgtgcagttgttgcctcaagcttg 124
||||||||||| | |||||||| |||||| ||||||
Sbjct: 41 tttcttgcaagatatgcagttgctgcctctagcttg 6
>42082_osa-MIR444a:mirbase
Length = 131
Score = 69.9 bits (35), Expect = 5e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 90 ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 132
|||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaa 53
|||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 120 ggcagcaagcttgaggcagcaactgcataacttgcaagaa 81
>42081_osa-MIR444a:mirbase
Length = 131
Score = 69.9 bits (35), Expect = 5e-13
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 90 ttcttgcaagttgtgcagttgttgcctcaagcttgctgcctcc 132
|||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 81 ttcttgcaagttatgcagttgctgcctcaagcttgctgcctcc 123
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 14 ggcaccaagcatgaggcaggaactgcattacttgcaagaa 53
|||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 120 ggcagcaagcttgaggcagcaactgcataacttgcaagaa 81
>42090_osa-MIR444e:mirbase
Length = 140
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 95 gcaagttgtgcagttgttgcctcaagcttgctgcct 130
||||||| |||||||| |||||||||||| ||||||
Sbjct: 91 gcaagttatgcagttgctgcctcaagcttactgcct 126
>41805_bdi-MIR444:mirbase
Length = 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 97 aagttgtgcagttgttgcctcaagcttgctgc 128
||||| |||||||| |||||||||||||||||
Sbjct: 79 aagttatgcagttgctgcctcaagcttgctgc 110
