miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00103;mir-1;ABIR01002879.1/50521-50595 6334:Trichinella
spiralis
Length = 75
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 atatggaatgtaaagaagtatg 92
||||||||||||||||||||||
Sbjct: 44 atatggaatgtaaagaagtatg 65
>RF00103;mir-1;ABLE02030552.1/3109-3195 281687:Caenorhabditis
japonica
Length = 87
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 atatggaatgtaaagaagtatg 92
||||||||||||||||||||||
Sbjct: 56 atatggaatgtaaagaagtatg 77
>RF00103;mir-1;AAGD02012398.1/27745-27823 31234:Caenorhabditis
remanei
Length = 79
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 atatggaatgtaaagaagtatg 92
||||||||||||||||||||||
Sbjct: 48 atatggaatgtaaagaagtatg 69
>RF00103;mir-1;CAAC02000511.1/295307-295229 6238:Caenorhabditis
briggsae
Length = 79
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 atatggaatgtaaagaagtatg 92
||||||||||||||||||||||
Sbjct: 48 atatggaatgtaaagaagtatg 69
>RF00103;mir-1;BAAB01105211.1/2094-2168 7091:Bombyx mori (domestic
silkworm)
Length = 75
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 atatggaatgtaaagaagtatg 92
||||||||||||||||||||||
Sbjct: 44 atatggaatgtaaagaagtatg 65
>RF00103;mir-1;AAGE02025061.1/66260-66336 7159:Aedes aegypti
(yellow fever mosquito)
Length = 77
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 atatggaatgtaaagaagtatg 92
||||||||||||||||||||||
Sbjct: 46 atatggaatgtaaagaagtatg 67
>RF00103;mir-1;AAPT01020974.1/21428-21504 7222:Drosophila
grimshawi
Length = 77
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 atatggaatgtaaagaagtatg 92
||||||||||||||||||||||
Sbjct: 46 atatggaatgtaaagaagtatg 67
>RF00103;mir-1;AAPU01010689.1/17805-17881 7230:Drosophila
mojavensis
Length = 77
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 atatggaatgtaaagaagtatg 92
||||||||||||||||||||||
Sbjct: 46 atatggaatgtaaagaagtatg 67
