miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>24961_cin-mir-4008b:mirbase
          Length = 62

 Score =  123 bits (62), Expect = 1e-29
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                      
Query: 1  tggcagtgatcgcaagttagcgccctgtaacagcttaagcaacagggtctagcctgcctg 60
          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1  tggcagtgatcgcaagttagcgccctgtaacagcttaagcaacagggtctagcctgcctg 60

            
Query: 61 cc 62
          ||
Sbjct: 61 cc 62

>24962_cin-mir-4008c:mirbase
          Length = 62

 Score = 48.1 bits (24), Expect = 7e-07
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 1  tggcagtgatcgcaagttagcgccctgt 28
          |||||||||||||||||||| |||||||
Sbjct: 1  tggcagtgatcgcaagttagtgccctgt 28

>24963_cin-mir-4008c:mirbase
          Length = 62

 Score = 48.1 bits (24), Expect = 7e-07
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 1  tggcagtgatcgcaagttagcgccctgt 28
          |||||||||||||||||||| |||||||
Sbjct: 1  tggcagtgatcgcaagttagtgccctgt 28