miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>46270_miR437:micropc
          Length = 175

 Score =  347 bits (175), Expect = 2e-96
 Identities = 175/175 (100%)
 Strand = Plus / Plus

                                                                       
Query: 23  aagtcaaacctctctaactttgatcaagtttatagaaaaatgcaccaaaatctagaatat 82
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   aagtcaaacctctctaactttgatcaagtttatagaaaaatgcaccaaaatctagaatat 60

                                                                       
Query: 83  caaactagttccattaaattctccatgaaatatattttgataatgcatttattgaacttg 142
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  caaactagttccattaaattctccatgaaatatattttgataatgcatttattgaacttg 120

                                                                  
Query: 143 tagatgataatatattttttctaaaaacttgatcaaagttagagaagtttgactt 197
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tagatgataatatattttttctaaaaacttgatcaaagttagagaagtttgactt 175



 Score = 63.9 bits (32), Expect = 5e-11
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 158 tttttctaaaaacttgatcaaagttagagaagtttgactt 197
           |||||||| ||||||||||||||||||||| |||||||||
Sbjct: 40  tttttctataaacttgatcaaagttagagaggtttgactt 1



 Score = 63.9 bits (32), Expect = 5e-11
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                   
Query: 23  aagtcaaacctctctaactttgatcaagtttatagaaaaa 62
           ||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 175 aagtcaaacttctctaactttgatcaagtttttagaaaaa 136




>45607_miR437:micropc
          Length = 177

 Score =  111 bits (56), Expect = 2e-25
 Identities = 137/160 (85%), Gaps = 3/160 (1%)
 Strand = Plus / Plus

                                                                       
Query: 40  ctttgatcaagtttatagaaaaatgcaccaaaatctagaatatcaaact-agttccatta 98
           |||||||||| ||||| |||||||| | ||| ||||| ||||||||  | | || ||| |
Sbjct: 19  ctttgatcaaatttatggaaaaatgtatcaacatctacaatatcaattttattttcataa 78

                                                                       
Query: 99  aattctccatgaaatatattttgataatgcatttatt-gaacttgtagatgataatatat 157
           ||||||||||||||||| | || ||| |||||||||| ||||||||||||| ||||||||
Sbjct: 79  aattctccatgaaatatttcttaatagtgcatttattcgaacttgtagatgttaatatat 138

                                                   
Query: 158 tttttctaaaaacttgatcaaagttagagaagtttgactt 197
           ||| |||||||  ||| |||||||||||||||| ||||||
Sbjct: 139 ttt-tctaaaactttggtcaaagttagagaagtctgactt 177




>45012_miR437:micropc
          Length = 149

 Score = 63.9 bits (32), Expect = 5e-11
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 150 taatatattttttctaaaaacttgatcaaagttagagaagtttgactt 197
           ||||| |||||||||  |||||||||| ||||||||||||||||||||
Sbjct: 102 taatacattttttctcgaaacttgatctaagttagagaagtttgactt 149




>46472_miR437:micropc
          Length = 180

 Score = 56.0 bits (28), Expect = 1e-08
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 158 tttttctaaaaacttgatcaaagttagagaagtttgactt 197
           |||||||| ||||||| | |||||||||||||||||||||
Sbjct: 141 tttttctacaaacttggttaaagttagagaagtttgactt 180



 Score = 50.1 bits (25), Expect = 7e-07
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 23  aagtcaaacctctctaactttgatcaagtttatagaaaaat 63
           ||||||||| ||||||||||| | ||||||| |||||||||
Sbjct: 180 aagtcaaacttctctaactttaaccaagtttgtagaaaaat 140



 Score = 44.1 bits (22), Expect = 4e-05
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                        
Query: 32 ctctctaactttgatcaagtttatagaaaa 61
          ||||| |||||||| |||||||||||||||
Sbjct: 10 ctctccaactttgaccaagtttatagaaaa 39