miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25433_pma-mir-18a:mirbase
Length = 97
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1 gtgcttgcttgtgtaaaggtgcatttagtgcagatagt 38
||||||||||||| ||||||||| |||||||||||||
Sbjct: 4 gtgcttgcttgtgctaaggtgcatctagtgcagatagt 41
>34212_dre-mir-18b:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||||||||||||||||||
Sbjct: 14 aaggtgcatttagtgcagatagtg 37
>25705_xtr-mir-18a:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 15 aaggtgcatctagtgcagatagtg 38
>25899_gga-mir-18a:mirbase
Length = 93
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 15 aaggtgcatctagtgcagatagtg 38
>26404_tgu-mir-18a:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 12 aaggtgcatctagtgcagatagtg 35
>26628_cfa-mir-18a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 15 aaggtgcatctagtgcagatagtg 38
>26950_eca-mir-18a:mirbase
Length = 61
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 2 aaggtgcatctagtgcagatagtg 25
>27337_mdo-mir-18:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 8 aaggtgcatctagtgcagatagtg 31
>27483_age-mir-18:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 7 aaggtgcatctagtgcagatagtg 30
>27544_lla-mir-18:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 7 aaggtgcatctagtgcagatagtg 30
>27592_sla-mir-18:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 7 aaggtgcatctagtgcagatagtg 30
>27656_mml-mir-18:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 7 aaggtgcatctagtgcagatagtg 30
>28175_mne-mir-18:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 7 aaggtgcatctagtgcagatagtg 30
>28263_ggo-mir-18:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 7 aaggtgcatctagtgcagatagtg 30
>28365_hsa-mir-18a:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 7 aaggtgcatctagtgcagatagtg 30
>30047_ppa-mir-18:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 7 aaggtgcatctagtgcagatagtg 30
>30152_ptr-mir-18a:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 7 aaggtgcatctagtgcagatagtg 30
>30757_ppy-mir-18:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 7 aaggtgcatctagtgcagatagtg 30
>31397_lca-mir-18:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 7 aaggtgcatctagtgcagatagtg 30
>31780_mmu-mir-18a:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 18 aaggtgcatctagtgcagatagtg 41
>32664_rno-mir-18a:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 18 aaggtgcatctagtgcagatagtg 41
>33134_bta-mir-18a:mirbase
Length = 71
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 7 aaggtgcatctagtgcagatagtg 30
>33917_ssc-mir-18a:mirbase
Length = 92
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 15 aaggtgcatctagtgcagatagtg 38
>34211_dre-mir-18a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 12 aaggtgcatctagtgcagatagtg 35
>34550_fru-mir-18:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 8 aaggtgcatctagtgcagatagtg 31
>34698_tni-mir-18:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 16 aaggtgcatttagtgcagatagtg 39
||||||||| ||||||||||||||
Sbjct: 8 aaggtgcatctagtgcagatagtg 31
