miRNEST 2.0, an integrative microRNA resource :: BLAST
>49004_osa-miR442:pmrd
Length = 233
Score = 71.9 bits (36), Expect = 2e-13
Identities = 91/108 (84%), Gaps = 1/108 (0%)
Strand = Plus / Plus
Query: 99 ttgcgagacgaatctattaagtctagtaagtccatgattttggcaatgttgtgctacaat 158
||||||||||||||| ||||| ||| | |||||||| | | |||||| |||||||| |
Sbjct: 63 ttgcgagacgaatcttttaagcctaattgctccatgatct-gacaatgtggtgctacagt 121
Query: 159 aaacatttgctagttagaaattaattaggcttaatagattcgtctcgc 206
|||||||||||| | | ||||||||||||||||| |||||||||||
Sbjct: 122 aaacatttgctaatgacggattaattaggcttaataaattcgtctcgc 169
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 181 aattaggcttaatagattcgtctcgc 206
|||||||||||| |||||||||||||
Sbjct: 90 aattaggcttaaaagattcgtctcgc 65
>50895_osa-miRf11680-akr:pmrd
Length = 145
Score = 60.0 bits (30), Expect = 9e-10
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 137 tttggcaatgttgtgctacaataaacatttgctagttagaaattaattaggcttaataga 196
|||| |||||| |||||| | ||||||||||||| | | ||||||||||||||||| |
Sbjct: 55 tttgacaatgtggtgctaaagtaaacatttgctaatgatggattaattaggcttaataaa 114
Query: 197 ttcgtctcgc 206
||||||||||
Sbjct: 115 ttcgtctcgc 124
>51205_osa-miRf11990-akr:pmrd
Length = 135
Score = 52.0 bits (26), Expect = 2e-07
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 178 attaattaggcttaatagattcgtctcgctaattagtc 215
|||||||||||| |||||||| ||||||| ||||||||
Sbjct: 39 attaattaggctcaatagatttgtctcgcgaattagtc 2
Score = 48.1 bits (24), Expect = 4e-06
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 56 ctaatttgcgagacaaatctattaagtctaataactccatgatt 99
|||||| |||||||||||||||| || ||||| | |||||||||
Sbjct: 4 ctaattcgcgagacaaatctattgagcctaattaatccatgatt 47
>50149_osa-miRf10934-akr:pmrd
Length = 143
Score = 52.0 bits (26), Expect = 2e-07
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 142 caatgttgtgctacaataaacatttgctagttagaaattaattaggcttaatagattc 199
|||||||||| |||||||||||||||||| | | ||||||||||||| ||| ||||
Sbjct: 59 caatgttgtggtacaataaacatttgctaatgacggattaattaggcttcataaattc 116
>49010_osa-miR445c:pmrd
Length = 260
Score = 48.1 bits (24), Expect = 4e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 180 taattaggcttaatagattcgtctcgctaattagtc 215
||||||||||||| |||||||||||| ||||||||
Sbjct: 148 taattaggcttaaaagattcgtctcgtgaattagtc 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 178 attaattaggcttaatagattcgtctcgc 206
||||||||||||||| | |||||||||||
Sbjct: 115 attaattaggcttaaaaaattcgtctcgc 87
>50021_osa-miRf10806-akr:pmrd
Length = 123
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 180 taattaggcttaatagattcgtctcgc 206
||||||||||||| |||||||||||||
Sbjct: 90 taattaggcttaaaagattcgtctcgc 116
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 178 attaattaggcttaatagattcgtctcgc 206
|||||||||||| || |||||||||||||
Sbjct: 36 attaattaggctcaaaagattcgtctcgc 8
>49008_osa-miR445a:pmrd
Length = 268
Score = 44.1 bits (22), Expect = 5e-05
Identities = 86/106 (81%), Gaps = 1/106 (0%)
Strand = Plus / Minus
Query: 101 gcgagacgaatctattaagtctagtaagtccatgattttggcaatgttgtgctacaataa 160
||||||||||||| || |||||| | | ||||||||| | |||||| ||||||| |||
Sbjct: 186 gcgagacgaatcttttgagtctaattacaccatgattt-gacaatgtgatgctacagtaa 128
Query: 161 acatttgctagttagaaattaattaggcttaatagattcgtctcgc 206
|| ||| || ||| ||||||||||||||| | |||||||||||
Sbjct: 127 acttttcataattatggattaattaggcttaaaaaattcgtctcgc 82
Score = 40.1 bits (20), Expect = 9e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 180 taattaggcttaatagattcgtctcgctaattagtc 215
||||||| || || ||||||||||||| ||||||||
Sbjct: 160 taattagactcaaaagattcgtctcgcgaattagtc 195
>49455_osa-miRf10240-akr:pmrd
Length = 128
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 178 attaattaggcttaatagattcgtctcgc 206
|||||||||||| || |||||||||||||
Sbjct: 89 attaattaggctcaaaagattcgtctcgc 117
>49015_osa-miR445h:pmrd
Length = 277
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 178 attaattaggcttaatagattcgtctcgc 206
||||||||||||||| | |||||||||||
Sbjct: 123 attaattaggcttaaaaaattcgtctcgc 95
Score = 40.1 bits (20), Expect = 9e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 180 taattaggcttaatagattcgtctcgctaattagtc 215
||||||| || || ||||||||||||| ||||||||
Sbjct: 156 taattagactcaaaagattcgtctcgcgaattagtc 191
>49014_osa-miR445g:pmrd
Length = 275
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 178 attaattaggcttaatagattcgtctcgc 206
||||||||||||||| | |||||||||||
Sbjct: 122 attaattaggcttaaaaaattcgtctcgc 94
>49012_osa-miR445e:pmrd
Length = 265
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 178 attaattaggcttaatagattcgtctcgc 206
||||||||||||||| | |||||||||||
Sbjct: 117 attaattaggcttaaaaaattcgtctcgc 89
Score = 40.1 bits (20), Expect = 9e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 180 taattaggcttaatagattcgtctcgctaattagtc 215
||||||| || || ||||||||||||| ||||||||
Sbjct: 150 taattagactcaaaagattcgtctcgcgaattagtc 185
>51000_osa-miRf11785-akr:pmrd
Length = 128
Score = 40.1 bits (20), Expect = 9e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 179 ttaattaggcttaatagattcgtctcgc 206
||||||||||| || |||||||||||||
Sbjct: 39 ttaattaggctcaaaagattcgtctcgc 12
>50155_osa-miRf10940-akr:pmrd
Length = 96
Score = 40.1 bits (20), Expect = 9e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 64 cgagacaaatctattaagtctaataactccatgatt 99
|||||||||||| || |||||||| | |||||||||
Sbjct: 3 cgagacaaatcttttgagtctaattagtccatgatt 38
>49733_osa-miRf10518-akr:pmrd
Length = 122
Score = 40.1 bits (20), Expect = 9e-04
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 179 ttaattaggcttaatagattcgtctcgc 206
||||||||||| || |||||||||||||
Sbjct: 36 ttaattaggctcaaaagattcgtctcgc 9
>49013_osa-miR445f:pmrd
Length = 305
Score = 40.1 bits (20), Expect = 9e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 180 taattaggcttaatagattcgtctcgctaattagtc 215
||||||| || || ||||||||||||| ||||||||
Sbjct: 171 taattagactcaaaagattcgtctcgcgaattagtc 206
>49009_osa-miR445b:pmrd
Length = 264
Score = 40.1 bits (20), Expect = 9e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 180 taattaggcttaatagattcgtctcgctaattagtc 215
||||||| || || ||||||||||||| ||||||||
Sbjct: 149 taattagactcaaaagattcgtctcgcgaattagtc 184
