miRNEST 2.0, an integrative microRNA resource :: BLAST
>42456_sof-MIR159e:mirbase
Length = 264
Score = 523 bits (264), Expect = e-149
Identities = 264/264 (100%)
Strand = Plus / Plus
Query: 21 ctgatgcttggatttgaagcggagctcctatcattccaatgaagggccgttctgaagggt 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgatgcttggatttgaagcggagctcctatcattccaatgaagggccgttctgaagggt 60
Query: 81 ggttccgctgctcgttcatggttcccactatcctatctcatcatgtatgtgtgtatgtat 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggttccgctgctcgttcatggttcccactatcctatctcatcatgtatgtgtgtatgtat 120
Query: 141 tttcgagagggaggagaggagctagactctcacggtggtcgtctttgagataggcttgtg 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttcgagagggaggagaggagctagactctcacggtggtcgtctttgagataggcttgtg 180
Query: 201 gtttgcatgaccgaagagctgcaccgtccccttgctggccgctctttggattgaaaggag 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtttgcatgaccgaagagctgcaccgtccccttgctggccgctctttggattgaaaggag 240
Query: 261 ctcttgcatctgatccatccatcc 284
||||||||||||||||||||||||
Sbjct: 241 ctcttgcatctgatccatccatcc 264
>42452_sof-MIR159a:mirbase
Length = 265
Score = 464 bits (234), Expect = e-131
Identities = 260/266 (97%), Gaps = 2/266 (0%)
Strand = Plus / Plus
Query: 20 cctgatgcttggatttgaagcggagctcctatcattccaatgaagggccgttctgaaggg 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgatgcttggatttgaagcggagctcctatcattccaatgaagggccgttctgaaggg 60
Query: 80 tggttccgctgctcgttcatggttcccactatcctatctcatcatgtatgtgtgtatgta 139
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgttccgctgctcgttcatggttcccactatcctatctcatcatgtatgtgtgtatgta 120
Query: 140 ttttcgagagggaggagaggagctagactctcacggtggtcgtctttgagataggcttgt 199
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 121 ttttcgagagggaggagaggagctagactctcatggtggtcgtctttgagataggcttgt 180
Query: 200 ggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctttggattgaaagga 259
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 181 ggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctttggattgaaggga 240
Query: 260 gctcttgcat-ctgatccatccatcc 284
|||| ||||| |||||||||||||||
Sbjct: 241 gctc-tgcatcctgatccatccatcc 265
>42453_sof-MIR159b:mirbase
Length = 266
Score = 458 bits (231), Expect = e-129
Identities = 261/267 (97%), Gaps = 3/267 (1%)
Strand = Plus / Plus
Query: 20 cctgatgcttggatttgaagcggagctcctatcattccaatgaagggccgttctgaaggg 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgatgcttggatttgaagcggagctcctatcattccaatgaagggccgttctgaaggg 60
Query: 80 tggttccgctgctcgttcatggttcccactatcctatctcatcatgtatgtgtgtatgta 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggttccgctgctcgttcatggttcccactatcctatctcatcatgtatgtgtgtatgta 120
Query: 140 ttttc-gagagggaggagaggagctagactctcacggtggtcgtctttgagataggcttg 198
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttttcggagagggaggagaggagctagactctcacggtggtcgtctttgagataggcttg 180
Query: 199 tggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctttggattgaaagg 258
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 181 tggtttgcatgaccgaggagctgcaccgtccccttgctggccgctctttggattgaaggg 240
Query: 259 agctcttgcat-ctgatccatccatcc 284
||||| ||||| |||| ||||||||||
Sbjct: 241 agctc-tgcatcctgaaccatccatcc 266
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 456 bits (230), Expect = e-129
Identities = 256/262 (97%), Gaps = 2/262 (0%)
Strand = Plus / Plus
Query: 23 gatgcttggatttgaagcggagctcctatcattccaatgaagggccgttctgaagggtgg 82
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1 gatgcttggatttgaagcggagctcctatcattccaatgaagggccgttctgaagggttg 60
Query: 83 ttccgctgctcgttcatggttcccactatcctatctcatcatgtatgtgtgtatgtattt 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttccgctgctcgttcatggttcccactatcctatctcatcatgtatgtgtgtatgtattt 120
Query: 143 tcgagagggaggagaggagctagactctcacggtggtcgtctttgagataggcttgtggt 202
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 tcgagagggaggagaggagctagactctcatggtggtcgtctttgagataggcttgtggt 180
Query: 203 ttgcatgaccgaagagctgcaccgtccccttgctggccgctctttggattgaaaggagct 262
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 181 ttgcatgaccgaggagctgcaccgtccccttgctggccgctctttggattgaagggagct 240
Query: 263 cttgcat-ctgatccatccatc 283
| ||||| ||||||||||||||
Sbjct: 241 c-tgcatcctgatccatccatc 261
>42455_sof-MIR159d:mirbase
Length = 265
Score = 440 bits (222), Expect = e-124
Identities = 257/266 (96%), Gaps = 2/266 (0%)
Strand = Plus / Plus
Query: 20 cctgatgcttggatttgaagcggagctcctatcattccaatgaagggccgttctgaaggg 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctgatgcttggatttgaagcggagctcctatcattccaatgaagggccgttctgaaggg 60
Query: 80 tggttccgctgctcgttcatggttcccactatcctatctcatcatgtatgtgtgtatgta 139
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgttccgctgctcgttcatggttcccactatcctatctcatcatgtatgtgtgtatgta 120
Query: 140 ttttcgagagggaggagaggagctagactctcacggtggtcgtctttgagataggcttgt 199
||||||||||||||||||||||||||||||||| || |||||||| ||||||| ||||||
Sbjct: 121 ttttcgagagggaggagaggagctagactctcatgggggtcgtctatgagatacgcttgt 180
Query: 200 ggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctttggattgaaagga 259
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 181 ggtttgcatgaccgatgagctgcaccgtccccttgctggccgctctttggattgaaggga 240
Query: 260 gctcttgcat-ctgatccatccatcc 284
|||| ||||| |||||||||||||||
Sbjct: 241 gctc-tgcatcctgatccatccatcc 265
>42494_sbi-MIR159:mirbase
Length = 226
Score = 228 bits (115), Expect = 2e-60
Identities = 202/228 (88%), Gaps = 6/228 (2%)
Strand = Plus / Plus
Query: 38 agcggagctcctatcattccaatgaagggccgttctgaagggtggttccgctgctcgttc 97
|||| |||||||||||||||||||||||||| || | | |||||||||||||||||||||
Sbjct: 1 agcgaagctcctatcattccaatgaagggcccttttcatgggtggttccgctgctcgttc 60
Query: 98 atggttcccactatcctatctcatcatgtatgtgtgtatgtattttcgagagggaggaga 157
|||||||||||||||||||||||||||||||||||||||||| | | ||| || ||||
Sbjct: 61 atggttcccactatcctatctcatcatgtatgtgtgtatgtactctagag-ggcccgaga 119
Query: 158 ggagctagactctcacggtggtc-gtctttgagataggcttgtggtttgcatgaccgaag 216
| ||| || ||| ||| |||||||||||||||||||||||||||||||||| |
Sbjct: 120 ag----agattcatgtggtcgtcagtctttgagataggcttgtggtttgcatgaccgagg 175
Query: 217 agctgcaccgtccccttgctggccgctctttggattgaaaggagctct 264
||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 176 agctgcaccgtccccttgctggccgctctttggattgaagggagctct 223
>42695_zma-MIR159f:mirbase
Length = 215
Score = 167 bits (84), Expect = 6e-42
Identities = 193/226 (85%), Gaps = 15/226 (6%)
Strand = Plus / Plus
Query: 41 ggagctcctatcattccaatgaagggccgttctgaagggtggttccgctgctcgttcatg 100
||||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||||
Sbjct: 1 ggagctcctctcattccaatgaagggtccttccgaagggtggttccgctgctcgttcatg 60
Query: 101 gttcccactatcctatctcat-catgtatgtgtgtatgtattttcgagagggaggagagg 159
||||||||||||||||||||| ||||| || ||| | ||||||||| || || |
Sbjct: 61 gttcccactatcctatctcatccatgtttgcgtg------tcttcgagaggaagcggaag 114
Query: 160 agctagactctcacggtggtcgtc-tttgagataggcttgtggtttgcatgaccgaagag 218
||| || | ||||||| | ||||||||||||||||||||||||||||||| |||
Sbjct: 115 ----agattc---ctgtggtcgccttttgagataggcttgtggtttgcatgaccgaggag 167
Query: 219 ctgcaccgtccccttgctggccgctctttggattgaaaggagctct 264
|||||||| |||| ||||||||||||||||||||||| ||||||||
Sbjct: 168 ctgcaccgaccccgtgctggccgctctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 159 bits (80), Expect = 2e-39
Identities = 96/100 (96%), Gaps = 1/100 (1%)
Strand = Plus / Plus
Query: 28 ttggatttgaagcggagctcctatcattccaatgaagggccgttctgaaggg-tggttcc 86
|||| |||||||||||||||||||||||||||||||||| ||||| |||||| |||||||
Sbjct: 9 ttgggtttgaagcggagctcctatcattccaatgaagggtcgttccgaagggctggttcc 68
Query: 87 gctgctcgttcatggttcccactatcctatctcatcatgt 126
||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gctgctcgttcatggttcccactatcctatctcatcatgt 108
Score = 147 bits (74), Expect = 6e-36
Identities = 83/86 (96%)
Strand = Plus / Plus
Query: 179 tcgtctttgagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctgg 238
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 141 tcgtctttgagataggcttgtggtttgcatgaccgaggagctgcaccgcccccttgctgg 200
Query: 239 ccgctctttggattgaaaggagctct 264
||||||||||||||||| ||||||||
Sbjct: 201 ccgctctttggattgaagggagctct 226
>41868_far-MIR159:mirbase
Length = 200
Score = 91.7 bits (46), Expect = 3e-19
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 187 gagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctt 246
||||||||| ||||| | |||||||||| |||| ||| |||||||| |||||||||||||
Sbjct: 111 gagataggcctgtggctagcatgaccgaggagccgcatcgtcccctcgctggccgctctt 170
Query: 247 tggattgaaaggagctct 264
||||||||| ||||||||
Sbjct: 171 tggattgaagggagctct 188
Score = 77.8 bits (39), Expect = 5e-15
Identities = 78/90 (86%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 28 ttggatttgaagcggagctcctatcattccaatgaagggccgttct--gaagggtggttc 85
|||| ||||| | ||||||||||||||||||||||| || | | || || ||||||| |
Sbjct: 3 ttggttttgaggtggagctcctatcattccaatgaaaggtcttgctaggaggggtggtac 62
Query: 86 cgctgctcgttcatggttcccactatccta 115
|||||||||||||||||||||||||||||
Sbjct: 63 agctgctcgttcatggttcccactatccta 92
>42700_zma-MIR159k:mirbase
Length = 200
Score = 89.7 bits (45), Expect = 1e-18
Identities = 73/81 (90%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 185 ttgagataggcttgtggtttgcatgaccgaagagctgcaccgtcccctt-gctggccgct 243
||||||| |||||||||||||||||||||| |||||||| ||||||||| | || |||||
Sbjct: 118 ttgagatgggcttgtggtttgcatgaccgaggagctgcatcgtccccttcgttgaccgct 177
Query: 244 ctttggattgaaaggagctct 264
||||||||||| ||||||||
Sbjct: 178 gtttggattgaagggagctct 198
Score = 58.0 bits (29), Expect = 4e-09
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 71 tctgaagggtggttccgctgctcgttcatggttcccactatcctatctcatca 123
||||| ||||||| | |||||||||||||||||||||| ||| |||||||||
Sbjct: 31 tctgatgggtggtacaactgctcgttcatggttcccactgtcccatctcatca 83
>42699_zma-MIR159j:mirbase
Length = 252
Score = 81.8 bits (41), Expect = 3e-16
Identities = 72/81 (88%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 185 ttgagataggcttgtggtttgcatgaccgaagagctgcaccgtcccctt-gctggccgct 243
||||||| |||||||||||||||||||||| ||||||| ||||||||| | || |||||
Sbjct: 170 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 229
Query: 244 ctttggattgaaaggagctct 264
||||||||||| ||||||||
Sbjct: 230 gtttggattgaagggagctct 250
Score = 65.9 bits (33), Expect = 2e-11
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 71 tctgaagggtggttccgctgctcgttcatggttcccactatcctatctcatca 123
||||| ||||||| | ||||||||||||||||||||||| ||| |||||||||
Sbjct: 83 tctgatgggtggtacagctgctcgttcatggttcccactgtcccatctcatca 135
>42691_zma-MIR159b:mirbase
Length = 221
Score = 81.8 bits (41), Expect = 3e-16
Identities = 73/81 (90%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 185 ttgagataggcttgtggtttgcatgaccgaagagctgcaccgtcccctt-gctggccgct 243
||||||| |||||||||||||||||||||| |||||||| ||||||||| | || |||||
Sbjct: 122 ttgagatgggcttgtggtttgcatgaccgaggagctgca-cgtccccttcgttgaccgct 180
Query: 244 ctttggattgaaaggagctct 264
||||||||||| ||||||||
Sbjct: 181 gtttggattgaagggagctct 201
Score = 65.9 bits (33), Expect = 2e-11
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 71 tctgaagggtggttccgctgctcgttcatggttcccactatcctatctcatca 123
||||| ||||||| | ||||||||||||||||||||||| ||| |||||||||
Sbjct: 52 tctgatgggtggtacagctgctcgttcatggttcccactgtcccatctcatca 104
>42634_tae-MIR159a:mirbase
Length = 177
Score = 79.8 bits (40), Expect = 1e-15
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 41 ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 99
|||||||||||||||||||||||||| | | ||||||| || | |||||||||||||
Sbjct: 3 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgctcgttcat 62
Query: 100 ggttcccactatcctatctc 119
||||||||||||||||||||
Sbjct: 63 ggttcccactatcctatctc 82
Score = 60.0 bits (30), Expect = 1e-09
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 187 gagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctt 246
|||| |||| |||||||||||||||||| |||| || || |||| |||| ||||| ||
Sbjct: 96 gagagaggcctgtggtttgcatgaccgaggagccgcttcgatccctcgctgaccgctgtt 155
Query: 247 tggattgaaaggagctct 264
||||||||| ||||||||
Sbjct: 156 tggattgaagggagctct 173
>42698_zma-MIR159i:mirbase
Length = 252
Score = 73.8 bits (37), Expect = 7e-14
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 185 ttgagataggcttgtggtttgcatgaccgaagagctgcaccgtcccctt-gctggccgct 243
||||||| |||||||||||||||||||||| ||||||| ||||||||| | || |||||
Sbjct: 170 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 229
Query: 244 ctttggattgaaaggagctct 264
|||||| |||| ||||||||
Sbjct: 230 gtttggagtgaagggagctct 250
Score = 65.9 bits (33), Expect = 2e-11
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 71 tctgaagggtggttccgctgctcgttcatggttcccactatcctatctcatca 123
||||| ||||||| | ||||||||||||||||||||||| ||| |||||||||
Sbjct: 83 tctgatgggtggtacagctgctcgttcatggttcccactgtcccatctcatca 135
>42697_zma-MIR159h:mirbase
Length = 200
Score = 73.8 bits (37), Expect = 7e-14
Identities = 71/81 (87%), Gaps = 1/81 (1%)
Strand = Plus / Plus
Query: 185 ttgagataggcttgtggtttgcatgaccgaagagctgcaccgtcccctt-gctggccgct 243
||||||| |||||||||||||||||||||| ||||||| ||||||||| | || |||||
Sbjct: 118 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtccccttcgttgaccgct 177
Query: 244 ctttggattgaaaggagctct 264
|||||| |||| ||||||||
Sbjct: 178 gtttggagtgaagggagctct 198
Score = 65.9 bits (33), Expect = 2e-11
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 71 tctgaagggtggttccgctgctcgttcatggttcccactatcctatctcatca 123
||||| ||||||| | ||||||||||||||||||||||| ||| |||||||||
Sbjct: 31 tctgatgggtggtacagctgctcgttcatggttcccactgtcccatctcatca 83
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 71.9 bits (36), Expect = 3e-13
Identities = 70/80 (87%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 41 ggagctcctatcattccaatgaagggccgttctgaagggtg-gttccgctgctcgttcat 99
|||||||||||||||||||||||||| | | ||||||| || | |||||| ||||||
Sbjct: 4 ggagctcctatcattccaatgaagggtctaccggaagggtttgtgcagctgcttgttcat 63
Query: 100 ggttcccactatcctatctc 119
||||||||||||||||||||
Sbjct: 64 ggttcccactatcctatctc 83
Score = 67.9 bits (34), Expect = 4e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 187 gagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctt 246
|||||||||||||||||||||||| ||| |||| || || |||| |||| ||||| ||
Sbjct: 98 gagataggcttgtggtttgcatgatcgaggagccgcttcgatccctcgctgaccgctgtt 157
Query: 247 tggattgaaaggagctct 264
||||||||| ||||||||
Sbjct: 158 tggattgaagggagctct 175
>41918_osa-MIR159b:mirbase
Length = 188
Score = 69.9 bits (35), Expect = 1e-12
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 35 tgaagcggagctcctatcattccaatgaagggccgttctgaagggtggttccgctgctcg 94
||||| ||||||||| || |||||||||| || ||||||||||| | | |||||| |
Sbjct: 6 tgaagtggagctcctttcgttccaatgaaaggtttatctgaagggtgatacagctgcttg 65
Query: 95 ttcatggttcccactatcctatctcat 121
||||||||||||||||| |||||||||
Sbjct: 66 ttcatggttcccactattctatctcat 92
Score = 67.9 bits (34), Expect = 4e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 187 gagataggcttgtggtttgcatgaccgaagagctgcaccgtccccttgctggccgctctt 246
|||||||||||||||||||||||||| | |||| | | | | |||||||| || |||||
Sbjct: 100 gagataggcttgtggtttgcatgaccaaggagccgaatcaactccttgctgaccactctt 159
Query: 247 tggattgaaaggagctct 264
||||||||| ||||||||
Sbjct: 160 tggattgaagggagctct 177
>42696_zma-MIR159g:mirbase
Length = 252
Score = 65.9 bits (33), Expect = 2e-11
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 71 tctgaagggtggttccgctgctcgttcatggttcccactatcctatctcatca 123
||||| ||||||| | ||||||||||||||||||||||| ||| |||||||||
Sbjct: 83 tctgatgggtggtacagctgctcgttcatggttcccactgtcccatctcatca 135
Score = 65.9 bits (33), Expect = 2e-11
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 185 ttgagataggcttgtggtttgcatgaccgaagagctgcaccgtcccctt 233
||||||| |||||||||||||||||||||| ||||||| |||||||||
Sbjct: 170 ttgagatgggcttgtggtttgcatgaccgaggagctgcctcgtcccctt 218
