miRNEST 2.0, an integrative microRNA resource :: BLAST
>45131_miR444:micropc
Length = 108
Score = 208 bits (105), Expect = 8e-55
Identities = 107/108 (99%)
Strand = Plus / Plus
Query: 16 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 60
Query: 76 cgataattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 61 cgataattttcttgcangttgtgcagttgttgtctcaagcttgctgcc 108
>46185_miR444:micropc
Length = 108
Score = 206 bits (104), Expect = 3e-54
Identities = 107/108 (99%)
Strand = Plus / Plus
Query: 16 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 60
Query: 76 cgataattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 61 cgataattttcttgcaagttgtgcagttgctgtctcaagcttgctgcc 108
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 21 caagctagaggcagcaactgcatatcttgcaagaaaatt 59
|||||| ||| ||||||||||| | ||||||||||||||
Sbjct: 103 caagcttgagacagcaactgcacaacttgcaagaaaatt 65
>44872_miR444:micropc
Length = 106
Score = 202 bits (102), Expect = 5e-53
Identities = 105/106 (99%)
Strand = Plus / Plus
Query: 17 gtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatacc 76
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatacc 60
Query: 77 gataattttcttgcaagttgtgcagttgttgtctcaagcttgctgc 122
|||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 61 gataattttcttgcaagttgtgcagttgctgtctcaagcttgctgc 106
Score = 46.1 bits (23), Expect = 7e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 21 caagctagaggcagcaactgcatatcttgcaagaaaatt 59
|||||| ||| ||||||||||| | ||||||||||||||
Sbjct: 102 caagcttgagacagcaactgcacaacttgcaagaaaatt 64
>45238_miR444:micropc
Length = 108
Score = 198 bits (100), Expect = 8e-52
Identities = 106/108 (98%)
Strand = Plus / Plus
Query: 16 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccatac 75
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaattggtttttgaaccatac 60
Query: 76 cgataattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgatcattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 108
>45525_miR444:micropc
Length = 94
Score = 186 bits (94), Expect = 3e-48
Identities = 94/94 (100%)
Strand = Plus / Minus
Query: 23 agctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataat 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 agctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataat 35
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagct 116
||||||||||||||||||||||||||||||||||
Sbjct: 34 tttcttgcaagttgtgcagttgttgtctcaagct 1
>45230_miR444:micropc
Length = 96
Score = 184 bits (93), Expect = 1e-47
Identities = 95/96 (98%)
Strand = Plus / Plus
Query: 22 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 60
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||| |||||||||||||||||||||||||
Sbjct: 61 ttttcttgcangttgtgcagttgttgtctcaagctt 96
>45562_miR444:micropc
Length = 96
Score = 182 bits (92), Expect = 4e-47
Identities = 95/96 (98%)
Strand = Plus / Plus
Query: 22 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 60
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||| ||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgctgtctcaagctt 96
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 22 aagctagaggcagcaactgcatatcttgcaagaaaatt 59
||||| ||| ||||||||||| | ||||||||||||||
Sbjct: 96 aagcttgagacagcaactgcacaacttgcaagaaaatt 59
>45024_miR444:micropc
Length = 96
Score = 182 bits (92), Expect = 4e-47
Identities = 95/96 (98%)
Strand = Plus / Minus
Query: 22 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 81
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 96 aagctagaggcagcaactgcatatcttgcaagaaaattggtttttgaaccataccgataa 37
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||||||||||||||
Sbjct: 36 ttttcttgcaagttgtgcagttgttgtctcaagctt 1
>45135_miR444:micropc
Length = 96
Score = 174 bits (88), Expect = 1e-44
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 22 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 81
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggtttttgaaccataccgatca 60
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
>46476_miR444:micropc
Length = 96
Score = 167 bits (84), Expect = 3e-42
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 22 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 81
|||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||
Sbjct: 1 aagctagaggcagcaactgcatatattgcaagaaaattgggtttcaaaccataccgataa 60
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
>45734_miR444:micropc
Length = 96
Score = 167 bits (84), Expect = 3e-42
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 22 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 81
|||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||
Sbjct: 1 aagctagaggcagcaactgcatatattgcaagaaaattgggtttcaaaccataccgataa 60
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
>45697_miR444:micropc
Length = 96
Score = 167 bits (84), Expect = 3e-42
Identities = 93/96 (96%)
Strand = Plus / Plus
Query: 22 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 81
|||||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||
Sbjct: 1 aagctagaggcagcaactgcatatattgcaagaaaattgggtttcaaaccataccgataa 60
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
>45828_miR444:micropc
Length = 114
Score = 117 bits (59), Expect = 2e-27
Identities = 100/114 (87%), Gaps = 6/114 (5%)
Strand = Plus / Plus
Query: 16 ggtgacaagctagaggcagcaactgcatatcttgcaagaaaatt------ggttttcgaa 69
||||||||||| | ||||||||||||| ||||||||||||||| | ||||| |
Sbjct: 1 ggtgacaagcttgtggcagcaactgcacatcttgcaagaaaatctttagggtttttcaga 60
Query: 70 ccataccgataattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ccataccgatgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 114
Score = 44.1 bits (22), Expect = 3e-05
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 81 attttcttgcaagttgtgcagttgttgtctcaagcttg 118
||||||||||||| |||||||||| || | ||||||||
Sbjct: 43 attttcttgcaagatgtgcagttgctgccacaagcttg 6
>45451_miR444:micropc
Length = 110
Score = 115 bits (58), Expect = 9e-27
Identities = 94/105 (89%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 21 caagctagaggcagcaactgcatatcttgcaagaaaa--ttggttttcgaaccataccga 78
|||||||||||||||||||||||| |||||||||||| | |||||| | ||||||
Sbjct: 6 caagctagaggcagcaactgcataccttgcaagaaaaaatcggttttgttgacgtaccga 65
Query: 79 taattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 tgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 110
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||||||||||| | |||||||| || ||| |||||||||||
Sbjct: 42 ttttcttgcaaggtatgcagttgctgcctctagcttgctgcc 1
>45168_miR444:micropc
Length = 110
Score = 115 bits (58), Expect = 9e-27
Identities = 94/105 (89%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 21 caagctagaggcagcaactgcatatcttgcaagaaaa--ttggttttcgaaccataccga 78
|||||||||||||||||||||||| |||||||||||| | |||||| | ||||||
Sbjct: 6 caagctagaggcagcaactgcataccttgcaagaaaaaatcggttttgttgacgtaccga 65
Query: 79 taattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 tgattttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 110
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagcttgctgcc 123
|||||||||||| | |||||||| || ||| |||||||||||
Sbjct: 42 ttttcttgcaaggtatgcagttgctgcctctagcttgctgcc 1
>45175_miR444:micropc
Length = 98
Score = 101 bits (51), Expect = 1e-22
Identities = 87/98 (88%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 22 aagctagaggcagcaactgcatatcttgcaagaaaa--ttggttttcgaaccataccgat 79
||||||||||||||||||||||| |||||||||||| | |||||| | |||||||
Sbjct: 98 aagctagaggcagcaactgcataccttgcaagaaaaaatcggttttgttgacgtaccgat 39
Query: 80 aattttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||||||||||||||||||||||||||||
Sbjct: 38 gattttcttgcaagttgtgcagttgttgtctcaagctt 1
>46210_miR444:micropc
Length = 102
Score = 93.7 bits (47), Expect = 3e-20
Identities = 82/94 (87%), Gaps = 6/94 (6%)
Strand = Plus / Plus
Query: 30 ggcagcaactgcatatcttgcaagaaaatt------ggttttcgaaccataccgataatt 83
||||||||||||| ||||||||||||||| | ||||| ||||||||||| |||
Sbjct: 9 ggcagcaactgcacatcttgcaagaaaatctttagggtttttcagaccataccgatgatt 68
Query: 84 ttcttgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||||||||||||
Sbjct: 69 ttcttgcaagttgtgcagttgttgtctcaagctt 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 81 attttcttgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||| |||||||||| || | |||||||
Sbjct: 37 attttcttgcaagatgtgcagttgctgccacaagctt 1
>45742_miR444:micropc
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||||||||||||||||| |||||||||
Sbjct: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 22 aagctagaggcagcaactgcatatcttgcaagaaaa 57
||||| |||||| |||||||| | ||||||||||||
Sbjct: 103 aagcttgaggcaacaactgcacaacttgcaagaaaa 68
>45712_miR444:micropc
Length = 103
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 82 ttttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||||||||||||||||| |||||||||
Sbjct: 68 ttttcttgcaagttgtgcagttgttgcctcaagctt 103
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 22 aagctagaggcagcaactgcatatcttgcaagaaaa 57
||||| |||||| |||||||| | ||||||||||||
Sbjct: 103 aagcttgaggcaacaactgcacaacttgcaagaaaa 68
>45665_miR444:micropc
Length = 111
Score = 63.9 bits (32), Expect = 3e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 122
|||||||||||||||||||||| || ||||||||||||||
Sbjct: 72 tttcttgcaagttgtgcagttgctgcctcaagcttgctgc 111
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 21 caagctagaggcagcaactgcatatcttgcaagaaa 56
|||||| ||||||||||||||| | |||||||||||
Sbjct: 107 caagcttgaggcagcaactgcacaacttgcaagaaa 72
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttg 118
|||||||||||| ||||||||||| |||| |||||
Sbjct: 40 tttcttgcaagtaatgcagttgttgcctcatgcttg 5
>46669_miR444:micropc
Length = 136
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||| |||||||||
Sbjct: 102 tttcttgcaagttgtgcagttgttgcctcaagctt 136
>46544_miR444:micropc
Length = 136
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||| |||||||||
Sbjct: 102 tttcttgcaagttgtgcagttgttgcctcaagctt 136
>46412_miR444:micropc
Length = 103
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||||||||||||| ||||||||||||
Sbjct: 35 tttcttgcaagttgtgcagttgctgtctcaagctt 1
>45976_miR444:micropc
Length = 133
Score = 61.9 bits (31), Expect = 1e-10
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
||||||||||||||||||||||||| |||||||||
Sbjct: 99 tttcttgcaagttgtgcagttgttgcctcaagctt 133
>46601_miR444:micropc
Length = 151
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 122
|||||||||||| ||||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 21 caagctagaggcagcaactgcatatcttgcaagaaa 56
|||||| ||||||||||||||| |||||||||||
Sbjct: 147 caagcttgaggcagcaactgcacgacttgcaagaaa 112
>45144_miR444:micropc
Length = 151
Score = 56.0 bits (28), Expect = 7e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 122
|||||||||||| ||||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcgtgcagttgctgcctcaagcttgctgc 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 21 caagctagaggcagcaactgcatatcttgcaagaaa 56
|||||| ||||||||||||||| |||||||||||
Sbjct: 147 caagcttgaggcagcaactgcacgacttgcaagaaa 112
>46299_miR444:micropc
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
||||| |||||||||||||||| ||||||||||||
Sbjct: 69 tttctcgcaagttgtgcagttgctgtctcaagctt 103
>45960_miR444:micropc
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
||||| |||||||||||||||| ||||||||||||
Sbjct: 69 tttctcgcaagttgtgcagttgctgtctcaagctt 103
>45334_miR444:micropc
Length = 101
Score = 54.0 bits (27), Expect = 3e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||||||||||||| || |||||||||
Sbjct: 67 tttcttgcaagttgtgcagttgctgcctcaagctt 101
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 22 aagctagaggcagcaactgcatatcttgcaagaaa 56
||||| ||||||||||||||| | |||||||||||
Sbjct: 101 aagcttgaggcagcaactgcacaacttgcaagaaa 67
>46094_miR444:micropc
Length = 151
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagcttgctgc 122
|||||||||||| |||||||| || ||||||||||||||
Sbjct: 112 tttcttgcaagtcatgcagttgctgcctcaagcttgctgc 151
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Minus
Query: 21 caagctagaggcagcaactgcatatcttgcaagaaa 56
|||||| |||||||||||||||| |||||||||||
Sbjct: 147 caagcttgaggcagcaactgcatgacttgcaagaaa 112
>46182_miR444:micropc
Length = 144
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||| ||||||||| || |||||||||
Sbjct: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
>45904_miR444:micropc
Length = 141
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 22 aagctagaggcagcaactgcatatcttgcaagaaa 56
||||| |||||||||||||||| |||||||||||
Sbjct: 141 aagcttgaggcagcaactgcatgacttgcaagaaa 107
>44855_miR444:micropc
Length = 144
Score = 46.1 bits (23), Expect = 7e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 83 tttcttgcaagttgtgcagttgttgtctcaagctt 117
|||||||||||| ||||||||| || |||||||||
Sbjct: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
