miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>25910_gga-mir-27b:mirbase
          Length = 97

 Score =  151 bits (76), Expect = 1e-37
 Identities = 79/80 (98%)
 Strand = Plus / Plus

                                                                      
Query: 13 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 72
          |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgattgtttccctctttgttcacagtggct 72

                              
Query: 73 aagttctgcacctgaagaga 92
          ||||||||||||||||||||
Sbjct: 73 aagttctgcacctgaagaga 92




>27674_mml-mir-27b:mirbase
          Length = 97

 Score =  143 bits (72), Expect = 3e-35
 Identities = 87/92 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  acctttctaccaaggtgcagagcttagctgattggtgaacagtgattgattccctctttg 60
          |||| |||| |||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 1  acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60

                                          
Query: 61 ttcacagtggctaagttctgcacctgaagaga 92
          ||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagaga 92




>28384_hsa-mir-27b:mirbase
          Length = 97

 Score =  143 bits (72), Expect = 3e-35
 Identities = 87/92 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  acctttctaccaaggtgcagagcttagctgattggtgaacagtgattgattccctctttg 60
          |||| |||| |||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 1  acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60

                                          
Query: 61 ttcacagtggctaagttctgcacctgaagaga 92
          ||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagaga 92




>30775_ppy-mir-27b:mirbase
          Length = 97

 Score =  143 bits (72), Expect = 3e-35
 Identities = 87/92 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  acctttctaccaaggtgcagagcttagctgattggtgaacagtgattgattccctctttg 60
          |||| |||| |||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 1  acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60

                                          
Query: 61 ttcacagtggctaagttctgcacctgaagaga 92
          ||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagaga 92




>32681_rno-mir-27b:mirbase
          Length = 97

 Score =  143 bits (72), Expect = 3e-35
 Identities = 87/92 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  acctttctaccaaggtgcagagcttagctgattggtgaacagtgattgattccctctttg 60
          |||| |||| |||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct: 1  acctctctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttg 60

                                          
Query: 61 ttcacagtggctaagttctgcacctgaagaga 92
          ||||||||||||||||||||||||||||||||
Sbjct: 61 ttcacagtggctaagttctgcacctgaagaga 92




>26416_tgu-mir-27:mirbase
          Length = 91

 Score =  141 bits (71), Expect = 1e-34
 Identities = 77/79 (97%)
 Strand = Plus / Plus

                                                                      
Query: 13 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 72
          |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgattgttttcctctttgttcacagtggct 72

                             
Query: 73 aagttctgcacctgaagag 91
          |||||||||||||||||||
Sbjct: 73 aagttctgcacctgaagag 91




>30170_ptr-mir-27b:mirbase
          Length = 96

 Score =  141 bits (71), Expect = 1e-34
 Identities = 83/87 (95%)
 Strand = Plus / Plus

                                                                      
Query: 6  tctaccaaggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcac 65
          |||| |||||||||||||||||||||||||||||||||||||| || || ||||||||||
Sbjct: 5  tctaacaaggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcac 64

                                     
Query: 66 agtggctaagttctgcacctgaagaga 92
          |||||||||||||||||||||||||||
Sbjct: 65 agtggctaagttctgcacctgaagaga 91




>27352_mdo-mir-27b:mirbase
          Length = 97

 Score =  131 bits (66), Expect = 1e-31
 Identities = 78/82 (95%)
 Strand = Plus / Plus

                                                                      
Query: 11 caaggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtgg 70
          |||||||||||||||||| |||||||||||||| | ||||| ||||||||||||||||||
Sbjct: 11 caaggtgcagagcttagccgattggtgaacagtcactgatttcctctttgttcacagtgg 70

                                
Query: 71 ctaagttctgcacctgaagaga 92
          ||||||||||||||||||||||
Sbjct: 71 ctaagttctgcacctgaagaga 92




>34566_fru-mir-27b:mirbase
          Length = 74

 Score =  129 bits (65), Expect = 4e-31
 Identities = 68/69 (98%)
 Strand = Plus / Plus

                                                                      
Query: 18 cagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggctaagtt 77
          |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6  cagagcttagctgattggtgaacagtgattgatttcctctttgttcacagtggctaagtt 65

                   
Query: 78 ctgcacctg 86
          |||||||||
Sbjct: 66 ctgcacctg 74




>34713_tni-mir-27b:mirbase
          Length = 74

 Score =  129 bits (65), Expect = 4e-31
 Identities = 68/69 (98%)
 Strand = Plus / Plus

                                                                      
Query: 18 cagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggctaagtt 77
          |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 6  cagagcttagctgattggtgaacagtgattgatttcctctttgttcacagtggctaagtt 65

                   
Query: 78 ctgcacctg 86
          |||||||||
Sbjct: 66 ctgcacctg 74




>33156_bta-mir-27b:mirbase
          Length = 97

 Score =  127 bits (64), Expect = 2e-30
 Identities = 76/80 (95%)
 Strand = Plus / Plus

                                                                      
Query: 13 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 72
          ||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 13 aggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggct 72

                              
Query: 73 aagttctgcacctgaagaga 92
          ||||||||||||||||||||
Sbjct: 73 aagttctgcacctgaagaga 92




>31798_mmu-mir-27b:mirbase
          Length = 73

 Score =  121 bits (61), Expect = 1e-28
 Identities = 70/73 (95%)
 Strand = Plus / Plus

                                                                      
Query: 13 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 72
          |||||||||||||||||||||||||||||||||||| || || |||||||||||||||||
Sbjct: 1  aggtgcagagcttagctgattggtgaacagtgattggtttccgctttgttcacagtggct 60

                       
Query: 73 aagttctgcacct 85
          |||||||||||||
Sbjct: 61 aagttctgcacct 73




>33932_ssc-mir-27b:mirbase
          Length = 80

 Score =  121 bits (61), Expect = 1e-28
 Identities = 73/77 (94%)
 Strand = Plus / Plus

                                                                      
Query: 13 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 72
          ||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 4  aggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggct 63

                           
Query: 73 aagttctgcacctgaag 89
          |||||||||||||||||
Sbjct: 64 aagttctgcacctgaag 80




>26967_eca-mir-27b:mirbase
          Length = 73

 Score =  113 bits (57), Expect = 2e-26
 Identities = 69/73 (94%)
 Strand = Plus / Plus

                                                                      
Query: 13 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 72
          ||||||||||||||||||||||||||||||||| || || || |||||||||||||||||
Sbjct: 1  aggtgcagagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggct 60

                       
Query: 73 aagttctgcacct 85
          |||||||||||||
Sbjct: 61 aagttctgcacct 73




>34238_dre-mir-27b:mirbase
          Length = 91

 Score =  111 bits (56), Expect = 9e-26
 Identities = 76/82 (92%), Gaps = 3/82 (3%)
 Strand = Plus / Plus

                                                                      
Query: 13 aggtgcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggct 72
          |||||||||||||||||||||||||||||||||||||    |||||||||||||||||||
Sbjct: 12 aggtgcagagcttagctgattggtgaacagtgattga---actctttgttcacagtggct 68

                                
Query: 73 aagttctgcacctgaagagagg 94
          |||||||||| |||| ||||||
Sbjct: 69 aagttctgcatctgaggagagg 90




>31445_oan-mir-27b:mirbase
          Length = 117

 Score = 97.6 bits (49), Expect = 1e-21
 Identities = 61/65 (93%)
 Strand = Plus / Plus

                                                                      
Query: 17 gcagagcttagctgattggtgaacagtgattgattccctctttgttcacagtggctaagt 76
          |||||||||||||||||||||||||||||||| |   |||||||||||||||||||||||
Sbjct: 28 gcagagcttagctgattggtgaacagtgattgctggactctttgttcacagtggctaagt 87

               
Query: 77 tctgc 81
          |||||
Sbjct: 88 tctgc 92




>26646_cfa-mir-27b:mirbase
          Length = 63

 Score = 93.7 bits (47), Expect = 2e-20
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                      
Query: 19 agagcttagctgattggtgaacagtgattgattccctctttgttcacagtggctaagttc 78
          ||||||||||||||||||||||||||| || || || |||||||||||||||||||||||
Sbjct: 1  agagcttagctgattggtgaacagtgactggtttccgctttgttcacagtggctaagttc 60

             
Query: 79 tgc 81
          |||
Sbjct: 61 tgc 63




>25450_pma-mir-27b:mirbase
          Length = 75

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                  
Query: 59 tgttcacagtggctaagttctgca 82
          ||||||||||||||||||||||||
Sbjct: 47 tgttcacagtggctaagttctgca 70




>34240_dre-mir-27d:mirbase
          Length = 89

 Score = 48.1 bits (24), Expect = 1e-06
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                      
Query: 57 tttgttcacagtggctaagttctgcacc 84
          ||||||||||||||||||||||| ||||
Sbjct: 53 tttgttcacagtggctaagttcttcacc 80




>25449_pma-mir-27a:mirbase
          Length = 75

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 58 ttgttcacagtggctaagttc 78
          |||||||||||||||||||||
Sbjct: 47 ttgttcacagtggctaagttc 67




>34568_fru-mir-27e:mirbase
          Length = 100

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 58 ttgttcacagtggctaagttc 78
          |||||||||||||||||||||
Sbjct: 57 ttgttcacagtggctaagttc 77




>34715_tni-mir-27e:mirbase
          Length = 83

 Score = 42.1 bits (21), Expect = 7e-05
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                               
Query: 58 ttgttcacagtggctaagttc 78
          |||||||||||||||||||||
Sbjct: 57 ttgttcacagtggctaagttc 77




>25723_xtr-mir-27a:mirbase
          Length = 76

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68




>25725_xtr-mir-27c-1:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71




>25726_xtr-mir-27c-2:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71




>26645_cfa-mir-27a:mirbase
          Length = 60

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 39 tgttcacagtggctaagttc 58




>26966_eca-mir-27a:mirbase
          Length = 77

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68




>27351_mdo-mir-27a:mirbase
          Length = 86

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73




>27491_age-mir-27a:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68




>27599_sla-mir-27a:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68




>27673_mml-mir-27a:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68




>28187_mne-mir-27a:mirbase
          Length = 79

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68




>28273_ggo-mir-27a:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68




>28383_hsa-mir-27a:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68




>30060_ppa-mir-27a:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68




>30169_ptr-mir-27a:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68




>30774_ppy-mir-27a:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68




>31404_lca-mir-27a:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 49 tgttcacagtggctaagttc 68




>31444_oan-mir-27a:mirbase
          Length = 85

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 51 tgttcacagtggctaagttc 70




>31797_mmu-mir-27a:mirbase
          Length = 87

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73




>32680_rno-mir-27a:mirbase
          Length = 87

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 54 tgttcacagtggctaagttc 73




>33154_bta-mir-27a:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71




>33155_bta-mir-27a:mirbase
          Length = 78

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71




>33931_ssc-mir-27a:mirbase
          Length = 82

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 52 tgttcacagtggctaagttc 71




>34237_dre-mir-27a:mirbase
          Length = 131

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 77 tgttcacagtggctaagttc 96




>34241_dre-mir-27e:mirbase
          Length = 106

 Score = 40.1 bits (20), Expect = 3e-04
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 59 tgttcacagtggctaagttc 78
          ||||||||||||||||||||
Sbjct: 63 tgttcacagtggctaagttc 82