miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31821_mmu-mir-92b:mirbase
Length = 83
Score = 75.8 bits (38), Expect = 4e-15
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 12 cgggatgttgtgcactgttgtcctttctcctgccaatattgcactcgtcccggcctcc 69
||||| || ||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 16 cgggacgtggtgcagtgttgttctttcccctgccaatattgcactcgtcccggcctcc 73
>32702_rno-mir-92b:mirbase
Length = 83
Score = 73.8 bits (37), Expect = 1e-14
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 21 gtgcactgttgtcctttctcctgccaatattgcactcgtcccggcctcc 69
||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 25 gtgcagtgttgttctttcccctgccaatattgcactcgtcccggcctcc 73
>33180_bta-mir-92b:mirbase
Length = 96
Score = 73.8 bits (37), Expect = 1e-14
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 21 gtgcactgttgtcctttctcctgccaatattgcactcgtcccggcctcc 69
||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 34 gtgcagtgttgttctttcccctgccaatattgcactcgtcccggcctcc 82
>33952_ssc-mir-92b:mirbase
Length = 80
Score = 73.8 bits (37), Expect = 1e-14
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 21 gtgcactgttgtcctttctcctgccaatattgcactcgtcccggcctcc 69
||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 24 gtgcagtgttgttctttcccctgccaatattgcactcgtcccggcctcc 72
>33953_ssc-mir-92b:mirbase
Length = 80
Score = 73.8 bits (37), Expect = 1e-14
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 21 gtgcactgttgtcctttctcctgccaatattgcactcgtcccggcctcc 69
||||| |||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 24 gtgcagtgttgttctttcccctgccaatattgcactcgtcccggcctcc 72
>34258_dre-mir-92b:mirbase
Length = 82
Score = 73.8 bits (37), Expect = 1e-14
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 13 gggatgttgtgcactgttgtcctttctcctgccaatattgcactcgtcccggcctcc 69
||||||||||||| |||||| | ||||| |||||||||||||||||||||||||||
Sbjct: 21 gggatgttgtgcagtgttgttcaatctcccgccaatattgcactcgtcccggcctcc 77
>26990_eca-mir-92b:mirbase
Length = 75
Score = 65.9 bits (33), Expect = 4e-12
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 21 gtgcactgttgtcctttctcctgccaatattgcactcgtcccggcctcc 69
||||| |||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 22 gtgcagtgttgttctttcccccgccaatattgcactcgtcccggcctcc 70
>27697_mml-mir-92b:mirbase
Length = 96
Score = 65.9 bits (33), Expect = 4e-12
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 21 gtgcactgttgtcctttctcctgccaatattgcactcgtcccggcctcc 69
||||| |||||| ||||| || |||||||||||||||||||||||||||
Sbjct: 34 gtgcagtgttgttctttcccccgccaatattgcactcgtcccggcctcc 82
>26668_cfa-mir-92b:mirbase
Length = 63
Score = 58.0 bits (29), Expect = 9e-10
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 21 gtgcactgttgtcctttctcctgccaatattgcactcgtcccggcctcc 69
||||| |||||| || || || |||||||||||||||||||||||||||
Sbjct: 15 gtgcagtgttgttctctcccccgccaatattgcactcgtcccggcctcc 63
>28407_hsa-mir-92b:mirbase
Length = 96
Score = 58.0 bits (29), Expect = 9e-10
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 21 gtgcactgttgtcctttctcctgccaatattgcactcgtcccggcctcc 69
||||| |||||| |||| || |||||||||||||||||||||||||||
Sbjct: 34 gtgcagtgttgttttttcccccgccaatattgcactcgtcccggcctcc 82
>30797_ppy-mir-92b:mirbase
Length = 96
Score = 58.0 bits (29), Expect = 9e-10
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 21 gtgcactgttgtcctttctcctgccaatattgcactcgtcccggcctcc 69
||||| |||||| |||| || |||||||||||||||||||||||||||
Sbjct: 34 gtgcagtgttgttttttcccccgccaatattgcactcgtcccggcctcc 82
>34875_sko-mir-92c:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 46 aatattgcactcgtcccggcct 67
||||||||||||||||||||||
Sbjct: 59 aatattgcactcgtcccggcct 80
>34949_xbo-mir-92a:mirbase
Length = 82
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 46 aatattgcactcgtcccggcct 67
||||||||||||||||||||||
Sbjct: 48 aatattgcactcgtcccggcct 69
>34820_spu-mir-92c:mirbase
Length = 101
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 atattgcactcgtcccggcct 67
|||||||||||||||||||||
Sbjct: 60 atattgcactcgtcccggcct 80
>38110_bma-mir-92:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 47 atattgcactcgtcccggcct 67
|||||||||||||||||||||
Sbjct: 66 atattgcactcgtcccggcct 86
>25350_odi-mir-92a:mirbase
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 tattgcactcgtcccggcct 67
||||||||||||||||||||
Sbjct: 66 tattgcactcgtcccggcct 85
>25466_pma-mir-92a:mirbase
Length = 80
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 48 tattgcactcgtcccggcct 67
||||||||||||||||||||
Sbjct: 49 tattgcactcgtcccggcct 68
>24669_bfl-mir-92b:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 49 attgcactcgtcccggcct 67
|||||||||||||||||||
Sbjct: 62 attgcactcgtcccggcct 80
>34818_spu-mir-92a:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 45 caatattgcactcgtcccggcct 67
|||||||||||| ||||||||||
Sbjct: 58 caatattgcacttgtcccggcct 80
>35008_dpu-mir-92:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 8e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 49 attgcactcgtcccggcct 67
|||||||||||||||||||
Sbjct: 62 attgcactcgtcccggcct 80
>35363_ame-mir-92a:mirbase
Length = 100
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 45 caatattgcactcgtcccggcct 67
|||||||||||| ||||||||||
Sbjct: 60 caatattgcacttgtcccggcct 82
>37577_ngi-mir-92a:mirbase
Length = 94
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 45 caatattgcactcgtcccggcct 67
|||||||||||| ||||||||||
Sbjct: 54 caatattgcacttgtcccggcct 76
>37609_nlo-mir-92a:mirbase
Length = 93
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 45 caatattgcactcgtcccggcct 67
|||||||||||| ||||||||||
Sbjct: 54 caatattgcacttgtcccggcct 76
>37647_nvi-mir-92a:mirbase
Length = 98
Score = 38.2 bits (19), Expect = 8e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 45 caatattgcactcgtcccggcct 67
|||||||||||| ||||||||||
Sbjct: 59 caatattgcacttgtcccggcct 81
