miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27377_mdo-mir-126:mirbase
Length = 69
Score = 111 bits (56), Expect = 6e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcgc 67
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 5 cattattacttttggtacgcgctgtgacacatcaaactcgtaccgtgagtaataatgcgc 64
>25944_gga-mir-126:mirbase
Length = 84
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcgc 67
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 14 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 73
>26455_tgu-mir-126:mirbase
Length = 132
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcgc 67
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 64 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 123
>27013_eca-mir-126:mirbase
Length = 73
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcgc 67
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 68
>27014_eca-mir-126:mirbase
Length = 73
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcgc 67
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 68
>27721_mml-mir-126:mirbase
Length = 85
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcgc 67
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 15 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 74
>28434_hsa-mir-126:mirbase
Length = 85
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcgc 67
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 15 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 74
>30212_ptr-mir-126:mirbase
Length = 84
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcgc 67
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 14 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 73
>30821_ppy-mir-126:mirbase
Length = 81
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcgc 67
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 15 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 74
>31847_mmu-mir-126:mirbase
Length = 73
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcgc 67
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 68
>31848_mmu-mir-126:mirbase
Length = 73
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcgc 67
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 68
>33204_bta-mir-126:mirbase
Length = 73
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcgc 67
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 68
>33973_ssc-mir-126:mirbase
Length = 73
Score = 103 bits (52), Expect = 2e-23
Identities = 58/60 (96%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcgc 67
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcgc 68
>26692_cfa-mir-126:mirbase
Length = 59
Score = 101 bits (51), Expect = 6e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcg 66
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 1 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcg 59
>32725_rno-mir-126:mirbase
Length = 73
Score = 101 bits (51), Expect = 6e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcg 66
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 9 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcg 67
>33060_rno-mir-3567:mirbase
Length = 118
Score = 101 bits (51), Expect = 6e-23
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcg 66
|||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 86 cattattacttttggtacgcgctgtgacacttcaaactcgtaccgtgagtaataatgcg 28
>31481_oan-mir-126:mirbase
Length = 110
Score = 93.7 bits (47), Expect = 1e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgcg 66
|||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||
Sbjct: 29 cattattacttttggtacgcgctgtgacgcttcaaactcgtaccgtgagtaataatgcg 87
>34283_dre-mir-126a:mirbase
Length = 101
Score = 69.9 bits (35), Expect = 2e-13
Identities = 54/59 (91%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcaca-tcaaactcgtaccgtgagtaataatgc 65
||||||||||||||||||||||| | || | |||||||||||||||||||||||||||
Sbjct: 26 cattattacttttggtacgcgctaggccagactcaaactcgtaccgtgagtaataatgc 84
>34590_fru-mir-126:mirbase
Length = 63
Score = 67.9 bits (34), Expect = 8e-13
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgc 65
||||||||||||||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 6 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaataatgc 63
>34737_tni-mir-126:mirbase
Length = 63
Score = 67.9 bits (34), Expect = 8e-13
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaataatgc 65
||||||||||||||||||||||| || ||| ||||||||||||||||||||||||
Sbjct: 6 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaataatgc 63
>34284_dre-mir-126b:mirbase
Length = 103
Score = 60.0 bits (30), Expect = 2e-10
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 8 cattattacttttggtacgcgctgtgtcacatcaaactcgtaccgtgagtaata 61
||||||||||||||||||||||| || ||| ||||||||||||||||||||
Sbjct: 23 cattattacttttggtacgcgctatgccactctcaactcgtaccgtgagtaata 76
>24832_cin-mir-126:mirbase
Length = 81
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 44 ctcgtaccgtgagtaataa 62
|||||||||||||||||||
Sbjct: 49 ctcgtaccgtgagtaataa 67
>25326_csa-mir-126:mirbase
Length = 101
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 44 ctcgtaccgtgagtaataa 62
|||||||||||||||||||
Sbjct: 65 ctcgtaccgtgagtaataa 83
>25475_pma-mir-126:mirbase
Length = 72
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 44 ctcgtaccgtgagtaataa 62
|||||||||||||||||||
Sbjct: 44 ctcgtaccgtgagtaataa 62
