miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>31531_oan-mir-205:mirbase
Length = 108
Score = 137 bits (69), Expect = 2e-33
Identities = 85/89 (95%), Gaps = 1/89 (1%)
Strand = Plus / Plus
Query: 5 atccatgggtt-ctgttgtccttcattccaccggagtctgtctcgtacctaaccagattt 63
||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||
Sbjct: 13 atccatgggtttctgttgtccttcattccaccggagtctgtttcgtacctaatcagattt 72
Query: 64 cagtggagtgaagcacaagagacatggag 92
||||||||||||||||||||| |||||||
Sbjct: 73 cagtggagtgaagcacaagaggcatggag 101
>25827_xtr-mir-205a:mirbase
Length = 86
Score = 107 bits (54), Expect = 1e-24
Identities = 66/70 (94%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgtctcgtacctaaccagatttcagtggagtgaagcac 79
|||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||
Sbjct: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtggagtgaagcac 73
Query: 80 aagagacatg 89
||||| ||||
Sbjct: 74 aagaggcatg 83
>26765_cfa-mir-205:mirbase
Length = 69
Score = 107 bits (54), Expect = 1e-24
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 19 ttgtccttcattccaccggagtctgtctcgtacctaaccagatttcagtggagtgaag 76
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4 ttgtccttcattccaccggagtctgtctcgtacccaaccagatttcagtggagtgaag 61
>33283_bta-mir-205:mirbase
Length = 69
Score = 107 bits (54), Expect = 1e-24
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 19 ttgtccttcattccaccggagtctgtctcgtacctaaccagatttcagtggagtgaag 76
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4 ttgtccttcattccaccggagtctgtctcgtacccaaccagatttcagtggagtgaag 61
>28329_ggo-mir-205:mirbase
Length = 110
Score = 105 bits (53), Expect = 6e-24
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 gacaatccatggg-ttctgttgtccttcattccaccggagtctgtctcgtacctaaccag 59
||||||||||| | |||| ||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 12 gacaatccatgtgcttctcttgtccttcattccaccggagtctgtctcatacccaaccag 71
Query: 60 atttcagtggagtgaag 76
|||||||||||||||||
Sbjct: 72 atttcagtggagtgaag 88
>28524_hsa-mir-205:mirbase
Length = 110
Score = 105 bits (53), Expect = 6e-24
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 gacaatccatggg-ttctgttgtccttcattccaccggagtctgtctcgtacctaaccag 59
||||||||||| | |||| ||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 12 gacaatccatgtgcttctcttgtccttcattccaccggagtctgtctcatacccaaccag 71
Query: 60 atttcagtggagtgaag 76
|||||||||||||||||
Sbjct: 72 atttcagtggagtgaag 88
>30117_ppa-mir-205:mirbase
Length = 110
Score = 105 bits (53), Expect = 6e-24
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 gacaatccatggg-ttctgttgtccttcattccaccggagtctgtctcgtacctaaccag 59
||||||||||| | |||| ||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 12 gacaatccatgtgcttctcttgtccttcattccaccggagtctgtctcatacccaaccag 71
Query: 60 atttcagtggagtgaag 76
|||||||||||||||||
Sbjct: 72 atttcagtggagtgaag 88
>30283_ptr-mir-205:mirbase
Length = 110
Score = 105 bits (53), Expect = 6e-24
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 gacaatccatggg-ttctgttgtccttcattccaccggagtctgtctcgtacctaaccag 59
||||||||||| | |||| ||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 12 gacaatccatgtgcttctcttgtccttcattccaccggagtctgtctcatacccaaccag 71
Query: 60 atttcagtggagtgaag 76
|||||||||||||||||
Sbjct: 72 atttcagtggagtgaag 88
>30901_ppy-mir-205:mirbase
Length = 109
Score = 105 bits (53), Expect = 6e-24
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 gacaatccatggg-ttctgttgtccttcattccaccggagtctgtctcgtacctaaccag 59
||||||||||| | |||| ||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 12 gacaatccatgtgcttctcttgtccttcattccaccggagtctgtctcatacccaaccag 71
Query: 60 atttcagtggagtgaag 76
|||||||||||||||||
Sbjct: 72 atttcagtggagtgaag 88
>27423_mdo-mir-205a:mirbase
Length = 72
Score = 101 bits (51), Expect = 9e-23
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 19 ttgtccttcattccaccggagtctgtctcgtacctaaccagatttcagtggagtgaagca 78
||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||
Sbjct: 2 ttgtccttcattccaccggagtctgtctcatatctaatcagatttcagtggagtgaagca 61
Query: 79 caagagacatg 89
||||| ||||
Sbjct: 62 taagaggcatg 72
>27518_age-mir-205:mirbase
Length = 109
Score = 101 bits (51), Expect = 9e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 14 ttctgttgtccttcattccaccggagtctgtctcgtacctaaccagatttcagtggagtg 73
|||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 26 ttctcttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtg 85
Query: 74 aag 76
|||
Sbjct: 86 aag 88
>27583_lla-mir-205:mirbase
Length = 110
Score = 101 bits (51), Expect = 9e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 14 ttctgttgtccttcattccaccggagtctgtctcgtacctaaccagatttcagtggagtg 73
|||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 26 ttctcttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtg 85
Query: 74 aag 76
|||
Sbjct: 86 aag 88
>27802_mml-mir-205:mirbase
Length = 110
Score = 101 bits (51), Expect = 9e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 14 ttctgttgtccttcattccaccggagtctgtctcgtacctaaccagatttcagtggagtg 73
|||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 26 ttctcttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtg 85
Query: 74 aag 76
|||
Sbjct: 86 aag 88
>28233_mne-mir-205:mirbase
Length = 110
Score = 101 bits (51), Expect = 9e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 14 ttctgttgtccttcattccaccggagtctgtctcgtacctaaccagatttcagtggagtg 73
|||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 26 ttctcttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtg 85
Query: 74 aag 76
|||
Sbjct: 86 aag 88
>34035_ssc-mir-205:mirbase
Length = 69
Score = 101 bits (51), Expect = 9e-23
Identities = 57/59 (96%)
Strand = Plus / Plus
Query: 19 ttgtccttcattccaccggagtctgtctcgtacctaaccagatttcagtggagtgaagc 77
||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 4 ttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaagc 62
>25668_xla-mir-205:mirbase
Length = 86
Score = 99.6 bits (50), Expect = 4e-22
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 20 tgtccttcattccaccggagtctgtctcgtacctaaccagatttcagtggagtgaagcac 79
|||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||||||
Sbjct: 14 tgtccttcattccaccggagtctgtctcatacataatcagatttcagtagagtgaagcac 73
Query: 80 aagagacatg 89
||||| ||||
Sbjct: 74 aagaggcatg 83
>27091_eca-mir-205:mirbase
Length = 69
Score = 99.6 bits (50), Expect = 4e-22
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 19 ttgtccttcattccaccggagtctgtctcgtacctaaccagatttcagtggagtgaag 76
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct: 4 ttgtccttcattccaccggagtctgtctcatacccaaccagatttcagtggagtgaag 61
>32795_rno-mir-205:mirbase
Length = 108
Score = 95.6 bits (48), Expect = 5e-21
Identities = 82/92 (89%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 1 gacaatccatgggttctgttgtccttcattccaccggagtctgtctcgtacctaaccaga 60
|||||||||||||| || ||||||||||||||||||||||||||| | || |||||||
Sbjct: 12 gacaatccatgggtcctcctgtccttcattccaccggagtctgtcttatgcc-aaccaga 70
Query: 61 tttcagtggagtgaagcacaagagacatggag 92
||||||||||||||||| || ||| |||||||
Sbjct: 71 tttcagtggagtgaagctcaggaggcatggag 102
>31931_mmu-mir-205:mirbase
Length = 68
Score = 77.8 bits (39), Expect = 1e-15
Identities = 55/59 (93%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 19 ttgtccttcattccaccggagtctgtctcgtacctaaccagatttcagtggagtgaagc 77
|||||||||||||||||||||||||||| | || ||||||||||||||||||||||||
Sbjct: 4 ttgtccttcattccaccggagtctgtcttatgcc-aaccagatttcagtggagtgaagc 61
>34633_fru-mir-205:mirbase
Length = 79
Score = 60.0 bits (30), Expect = 3e-10
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand = Plus / Plus
Query: 22 tccttcattccaccggagtctgtct-cgtacctaaccagatttcagtggagtgaagcaca 80
||||||||||||||||||||||| | ||| ||||||||||||||||| |||||| |
Sbjct: 10 tccttcattccaccggagtctgtatgtgtatttaaccagatttcagtggtgtgaagtgta 69
Query: 81 agagacatgg 90
||||||||||
Sbjct: 70 agagacatgg 79
>25523_pma-mir-205a:mirbase
Length = 75
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 gtccttcattccaccggagtctgtc 45
|||||||||||||||||||||||||
Sbjct: 9 gtccttcattccaccggagtctgtc 33
>25524_pma-mir-205b:mirbase
Length = 74
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 16 ctgttgtccttcattccaccggagtctgt 44
|||||| ||||||||||||||||||||||
Sbjct: 1 ctgttgcccttcattccaccggagtctgt 29
>34781_tni-mir-205:mirbase
Length = 66
Score = 48.1 bits (24), Expect = 1e-06
Identities = 49/56 (87%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 22 tccttcattccaccggagtctgtctc-gtacctaaccagatttcagtggagtgaag 76
||||||||||||||||||||||| | || ||||||||||||||||| ||||||
Sbjct: 3 tccttcattccaccggagtctgtaactgtttttaaccagatttcagtggtgtgaag 58
>34363_dre-mir-205:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 22 tccttcattccaccggagtctgt 44
|||||||||||||||||||||||
Sbjct: 19 tccttcattccaccggagtctgt 41
