miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27445_mdo-mir-365:mirbase
Length = 87
Score = 168 bits (85), Expect = 4e-43
Identities = 85/85 (100%)
Strand = Plus / Plus
Query: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 61
Query: 61 cctaaaaatccttattgctcttgca 85
|||||||||||||||||||||||||
Sbjct: 62 cctaaaaatccttattgctcttgca 86
>26814_cfa-mir-365-1:mirbase
Length = 87
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3 cgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcc 62
Query: 61 cctaaaaatccttattgctcttgca 85
|||||||||||||||||||||||||
Sbjct: 63 cctaaaaatccttattgctcttgca 87
>27147_eca-mir-365-2:mirbase
Length = 87
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3 cgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcc 62
Query: 61 cctaaaaatccttattgctcttgca 85
|||||||||||||||||||||||||
Sbjct: 63 cctaaaaatccttattgctcttgca 87
>27864_mml-mir-365-1:mirbase
Length = 87
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3 cgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcc 62
Query: 61 cctaaaaatccttattgctcttgca 85
|||||||||||||||||||||||||
Sbjct: 63 cctaaaaatccttattgctcttgca 87
>28601_hsa-mir-365-1:mirbase
Length = 87
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3 cgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcc 62
Query: 61 cctaaaaatccttattgctcttgca 85
|||||||||||||||||||||||||
Sbjct: 63 cctaaaaatccttattgctcttgca 87
>30342_ptr-mir-365-1:mirbase
Length = 86
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2 cgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcc 61
Query: 61 cctaaaaatccttattgctcttgca 85
|||||||||||||||||||||||||
Sbjct: 62 cctaaaaatccttattgctcttgca 86
>30968_ppy-mir-365-1:mirbase
Length = 87
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3 cgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcc 62
Query: 61 cctaaaaatccttattgctcttgca 85
|||||||||||||||||||||||||
Sbjct: 63 cctaaaaatccttattgctcttgca 87
>31549_oan-mir-365:mirbase
Length = 83
Score = 157 bits (79), Expect = 2e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 2 gcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgccc 61
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 gcagggaaaatgagggacttttgggggcagatgtgtttccattgcactatcataatgccc 60
Query: 62 ctaaaaatccttattgctcttgc 84
|||||||||||||||||||||||
Sbjct: 61 ctaaaaatccttattgctcttgc 83
>32036_mmu-mir-365-1:mirbase
Length = 87
Score = 153 bits (77), Expect = 2e-38
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
|||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 3 cgcagggaaaatgagggacttttgggggcagatgtgtttccattccgctatcataatgcc 62
Query: 61 cctaaaaatccttattgctcttgca 85
|||||||||||||||||||||||||
Sbjct: 63 cctaaaaatccttattgctcttgca 87
>33338_bta-mir-365:mirbase
Length = 87
Score = 153 bits (77), Expect = 2e-38
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 3 cgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatgcc 62
Query: 61 cctaaaaatccttattgctcttgca 85
|||||||||||||||||||||||||
Sbjct: 63 cctaaaaatccttattgctcttgca 87
>33339_bta-mir-365:mirbase
Length = 87
Score = 153 bits (77), Expect = 2e-38
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||
Sbjct: 3 cgcagggaaaatgagggacttttgggggcagatgtgtttgcattccactatcataatgcc 62
Query: 61 cctaaaaatccttattgctcttgca 85
|||||||||||||||||||||||||
Sbjct: 63 cctaaaaatccttattgctcttgca 87
>34072_ssc-mir-365-1:mirbase
Length = 80
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattccactatcataatgcc 60
Query: 61 cctaaaaatccttattgctc 80
||||||||||||||||||||
Sbjct: 61 cctaaaaatccttattgctc 80
>26526_tgu-mir-365-1:mirbase
Length = 72
Score = 143 bits (72), Expect = 2e-35
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 14 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcctt 60
Query: 74 attgctcttgca 85
||||||||||||
Sbjct: 61 attgctcttgca 72
>25851_xtr-mir-365-1:mirbase
Length = 86
Score = 137 bits (69), Expect = 1e-33
Identities = 81/85 (95%)
Strand = Plus / Plus
Query: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct: 2 cgcagggaaaatgagggacttttgggggcagatgtgtttcacttacactaccataatgcc 61
Query: 61 cctaaaaatccttattgctcttgca 85
||||||||||||||||| |||||||
Sbjct: 62 cctaaaaatccttattgttcttgca 86
>34394_dre-mir-365-1:mirbase
Length = 89
Score = 105 bits (53), Expect = 5e-24
Identities = 77/85 (90%)
Strand = Plus / Plus
Query: 1 cgcagggaaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcc 60
|||||||| |||||||| |||||||||||| |||||||| || ||| |||||||||||
Sbjct: 2 cgcagggagaatgaggggcttttgggggcacttgtgtttcagtttcaccatcataatgcc 61
Query: 61 cctaaaaatccttattgctcttgca 85
|||||||||||||||||||||||||
Sbjct: 62 cctaaaaatccttattgctcttgca 86
>34395_dre-mir-365-2:mirbase
Length = 98
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
|||||||||||||||| ||||||| ||||||| | || | |||||||||||||||||
Sbjct: 12 aaaatgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaa 71
Query: 68 atccttattgctcttgca 85
||||||||||||||||||
Sbjct: 72 atccttattgctcttgca 89
>32037_mmu-mir-365-2:mirbase
Length = 112
Score = 75.8 bits (38), Expect = 4e-15
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
||||||||||||||| ||||||| ||||||||| | || | |||||||||||||||||
Sbjct: 23 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 81
Query: 68 atccttattgctcttgca 85
|||||||||| |||||||
Sbjct: 82 atccttattgttcttgca 99
>32883_rno-mir-365:mirbase
Length = 86
Score = 75.8 bits (38), Expect = 4e-15
Identities = 69/78 (88%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
||||||||||||||| ||||||| ||||||||| | || | |||||||||||||||||
Sbjct: 10 aaaatgagggactttcaggggcagctgtgtttcc-tgactcagtcataatgcccctaaaa 68
Query: 68 atccttattgctcttgca 85
|||||||||| |||||||
Sbjct: 69 atccttattgttcttgca 86
>34650_fru-mir-365:mirbase
Length = 95
Score = 75.8 bits (38), Expect = 4e-15
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 12 tgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcc 71
|||||||||||| ||||||| ||||||| | || | |||||||||||||||||||||
Sbjct: 13 tgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaaatcc 72
Query: 72 ttattgctcttgca 85
||||||||||||||
Sbjct: 73 ttattgctcttgca 86
>34798_tni-mir-365:mirbase
Length = 92
Score = 75.8 bits (38), Expect = 4e-15
Identities = 65/74 (87%)
Strand = Plus / Plus
Query: 12 tgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaatcc 71
|||||||||||| ||||||| ||||||| | || | |||||||||||||||||||||
Sbjct: 13 tgagggacttttaggggcagctgtgttttattaacccagtcataatgcccctaaaaatcc 72
Query: 72 ttattgctcttgca 85
||||||||||||||
Sbjct: 73 ttattgctcttgca 86
>34396_dre-mir-365-3:mirbase
Length = 99
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 51 tcataatgcccctaaaaatccttattgctcttgca 85
|||||||||||||||||||||||||||||||||||
Sbjct: 56 tcataatgcccctaaaaatccttattgctcttgca 90
>34397_dre-mir-365-4:mirbase
Length = 99
Score = 69.9 bits (35), Expect = 3e-13
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 51 tcataatgcccctaaaaatccttattgctcttgca 85
|||||||||||||||||||||||||||||||||||
Sbjct: 56 tcataatgcccctaaaaatccttattgctcttgca 90
>26022_gga-mir-365-2:mirbase
Length = 96
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
||||||||||||||| ||||||| ||||||| | || | |||||||||||||||||
Sbjct: 11 aaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgcccctaaaa 70
Query: 68 atccttattgctcttgca 85
|||||||||| |||||||
Sbjct: 71 atccttattgttcttgca 88
>26527_tgu-mir-365-2:mirbase
Length = 112
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
||||||||||||||| ||||||| ||||||| | || | |||||||||||||||||
Sbjct: 35 aaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgcccctaaaa 94
Query: 68 atccttattgctcttgca 85
|||||||||| |||||||
Sbjct: 95 atccttattgttcttgca 112
>26815_cfa-mir-365-2:mirbase
Length = 111
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
||||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 23 aaaatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaa 81
Query: 68 atccttattgctcttgca 85
|||||||||| |||||||
Sbjct: 82 atccttattgttcttgca 99
>27865_mml-mir-365-2:mirbase
Length = 111
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
||||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 23 aaaatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaa 81
Query: 68 atccttattgctcttgca 85
|||||||||| |||||||
Sbjct: 82 atccttattgttcttgca 99
>28602_hsa-mir-365-2:mirbase
Length = 111
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
||||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 23 aaaatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaa 81
Query: 68 atccttattgctcttgca 85
|||||||||| |||||||
Sbjct: 82 atccttattgttcttgca 99
>30969_ppy-mir-365-2:mirbase
Length = 111
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
||||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 23 aaaatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaa 81
Query: 68 atccttattgctcttgca 85
|||||||||| |||||||
Sbjct: 82 atccttattgttcttgca 99
>33340_bta-mir-365-2:mirbase
Length = 111
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
||||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 23 aaaatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaa 81
Query: 68 atccttattgctcttgca 85
|||||||||| |||||||
Sbjct: 82 atccttattgttcttgca 99
>34073_ssc-mir-365-2:mirbase
Length = 80
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
||||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 2 aaaatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaa 60
Query: 68 atccttattgctcttgca 85
|||||||||| |||||||
Sbjct: 61 atccttattgttcttgca 78
>34074_ssc-mir-365-2:mirbase
Length = 80
Score = 67.9 bits (34), Expect = 1e-12
Identities = 68/78 (87%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
||||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||
Sbjct: 2 aaaatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaa 60
Query: 68 atccttattgctcttgca 85
|||||||||| |||||||
Sbjct: 61 atccttattgttcttgca 78
>30343_ptr-mir-365-2:mirbase
Length = 110
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 54 taatgcccctaaaaatccttattgctcttgca 85
|||||||||||||||||||||||| |||||||
Sbjct: 68 taatgcccctaaaaatccttattgttcttgca 99
>27146_eca-mir-365:mirbase
Length = 66
Score = 54.0 bits (27), Expect = 2e-08
Identities = 58/67 (86%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 10 aatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaaat 69
||||||||||||| ||||||| ||||||| | | || | |||||||||||||||||||
Sbjct: 1 aatgagggactttcaggggcagctgtgttttc-tgactcagtcataatgcccctaaaaat 59
Query: 70 ccttatt 76
|||||||
Sbjct: 60 ccttatt 66
