miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26527_tgu-mir-365-2:mirbase
Length = 112
Score = 174 bits (88), Expect = 7e-45
Identities = 88/88 (100%)
Strand = Plus / Plus
Query: 1 ggcagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 ggcagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataat 84
Query: 61 gcccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||||
Sbjct: 85 gcccctaaaaatccttattgttcttgca 112
>34395_dre-mir-365-2:mirbase
Length = 98
Score = 155 bits (78), Expect = 7e-39
Identities = 87/90 (96%)
Strand = Plus / Plus
Query: 1 ggcagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataat 60
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 2 ggcagcaagaaaaatgagggacttttaggggcagctgtgttttattaacccagtcataat 61
Query: 61 gcccctaaaaatccttattgttcttgcaat 90
|||||||||||||||||||| |||||||||
Sbjct: 62 gcccctaaaaatccttattgctcttgcaat 91
>34650_fru-mir-365:mirbase
Length = 95
Score = 147 bits (74), Expect = 2e-36
Identities = 89/94 (94%)
Strand = Plus / Plus
Query: 3 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 62
||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 1 cagcaagaaaagtgagggacttttaggggcagctgtgttttattaacccagtcataatgc 60
Query: 63 ccctaaaaatccttattgttcttgcaatggtcaa 96
|||||||||||||||||| ||||||||| |||||
Sbjct: 61 ccctaaaaatccttattgctcttgcaattgtcaa 94
>34798_tni-mir-365:mirbase
Length = 92
Score = 143 bits (72), Expect = 3e-35
Identities = 84/88 (95%)
Strand = Plus / Plus
Query: 3 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 62
||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 1 cagcaagaaaagtgagggacttttaggggcagctgtgttttattaacccagtcataatgc 60
Query: 63 ccctaaaaatccttattgttcttgcaat 90
|||||||||||||||||| |||||||||
Sbjct: 61 ccctaaaaatccttattgctcttgcaat 88
>26815_cfa-mir-365-2:mirbase
Length = 111
Score = 139 bits (70), Expect = 4e-34
Identities = 83/86 (96%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 3 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 62
||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 63 ccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||
Sbjct: 74 ccctaaaaatccttattgttcttgca 99
>27865_mml-mir-365-2:mirbase
Length = 111
Score = 139 bits (70), Expect = 4e-34
Identities = 83/86 (96%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 3 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 62
||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 63 ccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||
Sbjct: 74 ccctaaaaatccttattgttcttgca 99
>28602_hsa-mir-365-2:mirbase
Length = 111
Score = 139 bits (70), Expect = 4e-34
Identities = 83/86 (96%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 3 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 62
||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 63 ccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||
Sbjct: 74 ccctaaaaatccttattgttcttgca 99
>30969_ppy-mir-365-2:mirbase
Length = 111
Score = 139 bits (70), Expect = 4e-34
Identities = 83/86 (96%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 3 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 62
||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 63 ccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||
Sbjct: 74 ccctaaaaatccttattgttcttgca 99
>33340_bta-mir-365-2:mirbase
Length = 111
Score = 139 bits (70), Expect = 4e-34
Identities = 83/86 (96%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 3 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 62
||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgc 73
Query: 63 ccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||
Sbjct: 74 ccctaaaaatccttattgttcttgca 99
>32037_mmu-mir-365-2:mirbase
Length = 112
Score = 131 bits (66), Expect = 1e-31
Identities = 82/86 (95%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 3 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 62
||||||||||||||||||||||||||||||||||||| ||| || || ||||||||||||
Sbjct: 15 cagcaagaaaaatgagggactttcaggggcagctgtg-tttcctgactcagtcataatgc 73
Query: 63 ccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||
Sbjct: 74 ccctaaaaatccttattgttcttgca 99
>32883_rno-mir-365:mirbase
Length = 86
Score = 131 bits (66), Expect = 1e-31
Identities = 82/86 (95%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 3 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 62
||||||||||||||||||||||||||||||||||||| ||| || || ||||||||||||
Sbjct: 2 cagcaagaaaaatgagggactttcaggggcagctgtg-tttcctgactcagtcataatgc 60
Query: 63 ccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||
Sbjct: 61 ccctaaaaatccttattgttcttgca 86
>34396_dre-mir-365-3:mirbase
Length = 99
Score = 131 bits (66), Expect = 1e-31
Identities = 81/86 (94%)
Strand = Plus / Plus
Query: 3 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 62
||||||||||| ||||||||||| ||||||||||||||| |||| |||||||||||||||
Sbjct: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
Query: 63 ccctaaaaatccttattgttcttgca 88
|||||||||||||||||| |||||||
Sbjct: 65 ccctaaaaatccttattgctcttgca 90
>34397_dre-mir-365-4:mirbase
Length = 99
Score = 131 bits (66), Expect = 1e-31
Identities = 81/86 (94%)
Strand = Plus / Plus
Query: 3 cagcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgc 62
||||||||||| ||||||||||| ||||||||||||||| |||| |||||||||||||||
Sbjct: 5 cagcaagaaaagtgagggacttttaggggcagctgtgttatactgacccagtcataatgc 64
Query: 63 ccctaaaaatccttattgttcttgca 88
|||||||||||||||||| |||||||
Sbjct: 65 ccctaaaaatccttattgctcttgca 90
>34073_ssc-mir-365-2:mirbase
Length = 80
Score = 125 bits (63), Expect = 6e-30
Identities = 76/79 (96%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 10 aaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgcccctaaa 69
|||||||||||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 1 aaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgcccctaaa 59
Query: 70 aatccttattgttcttgca 88
|||||||||||||||||||
Sbjct: 60 aatccttattgttcttgca 78
>34074_ssc-mir-365-2:mirbase
Length = 80
Score = 125 bits (63), Expect = 6e-30
Identities = 76/79 (96%), Gaps = 1/79 (1%)
Strand = Plus / Plus
Query: 10 aaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgcccctaaa 69
|||||||||||||||||||||||||||||||||| || || |||||||||||||||||||
Sbjct: 1 aaaaatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgcccctaaa 59
Query: 70 aatccttattgttcttgca 88
|||||||||||||||||||
Sbjct: 60 aatccttattgttcttgca 78
>30343_ptr-mir-365-2:mirbase
Length = 110
Score = 113 bits (57), Expect = 2e-26
Identities = 79/85 (92%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 4 agcaagaaaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgcc 63
||||||||||||||||||||||| |||||||||||||||| || || |||| |||||||
Sbjct: 16 agcaagaaaaatgagggactttctggggcagctgtgtttt-ctgacttagtcttaatgcc 74
Query: 64 cctaaaaatccttattgttcttgca 88
|||||||||||||||||||||||||
Sbjct: 75 cctaaaaatccttattgttcttgca 99
>27146_eca-mir-365:mirbase
Length = 66
Score = 101 bits (51), Expect = 9e-23
Identities = 64/67 (95%), Gaps = 1/67 (1%)
Strand = Plus / Plus
Query: 13 aatgagggactttcaggggcagctgtgttttactaacccagtcataatgcccctaaaaat 72
||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct: 1 aatgagggactttcaggggcagctgtgtttt-ctgactcagtcataatgcccctaaaaat 59
Query: 73 ccttatt 79
|||||||
Sbjct: 60 ccttatt 66
>25851_xtr-mir-365-1:mirbase
Length = 86
Score = 83.8 bits (42), Expect = 2e-17
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 11 aaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgcccctaaaa 70
||||||||||||||| ||||||| ||||||| ||| || | ||||||||||||||||
Sbjct: 9 aaaatgagggacttttgggggcagatgtgtttcacttacactaccataatgcccctaaaa 68
Query: 71 atccttattgttcttgca 88
||||||||||||||||||
Sbjct: 69 atccttattgttcttgca 86
>26021_gga-mir-365-1:mirbase
Length = 85
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 11 aaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgcccctaaaa 70
||||||||||||||| ||||||| ||||||| | || | |||||||||||||||||
Sbjct: 8 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 67
Query: 71 atccttattgttcttgca 88
|||||||||| |||||||
Sbjct: 68 atccttattgctcttgca 85
>27445_mdo-mir-365:mirbase
Length = 87
Score = 67.9 bits (34), Expect = 1e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 11 aaaatgagggactttcaggggcagctgtgttttactaacccagtcataatgcccctaaaa 70
||||||||||||||| ||||||| ||||||| | || | |||||||||||||||||
Sbjct: 9 aaaatgagggacttttgggggcagatgtgtttccattacactatcataatgcccctaaaa 68
Query: 71 atccttattgttcttgca 88
|||||||||| |||||||
Sbjct: 69 atccttattgctcttgca 86
>26526_tgu-mir-365-1:mirbase
Length = 72
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 54 tcataatgcccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||| |||||||
Sbjct: 38 tcataatgcccctaaaaatccttattgctcttgca 72
>26814_cfa-mir-365-1:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 54 tcataatgcccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||| |||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>27147_eca-mir-365-2:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 54 tcataatgcccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||| |||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>27864_mml-mir-365-1:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 54 tcataatgcccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||| |||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>28601_hsa-mir-365-1:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 54 tcataatgcccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||| |||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>30342_ptr-mir-365-1:mirbase
Length = 86
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 54 tcataatgcccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||| |||||||
Sbjct: 52 tcataatgcccctaaaaatccttattgctcttgca 86
>30968_ppy-mir-365-1:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 54 tcataatgcccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||| |||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>32036_mmu-mir-365-1:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 54 tcataatgcccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||| |||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>33338_bta-mir-365:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 54 tcataatgcccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||| |||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>33339_bta-mir-365:mirbase
Length = 87
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 54 tcataatgcccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||| |||||||
Sbjct: 53 tcataatgcccctaaaaatccttattgctcttgca 87
>34394_dre-mir-365-1:mirbase
Length = 89
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 54 tcataatgcccctaaaaatccttattgttcttgca 88
||||||||||||||||||||||||||| |||||||
Sbjct: 52 tcataatgcccctaaaaatccttattgctcttgca 86
>31549_oan-mir-365:mirbase
Length = 83
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 54 tcataatgcccctaaaaatccttattgttcttgc 87
||||||||||||||||||||||||||| ||||||
Sbjct: 50 tcataatgcccctaaaaatccttattgctcttgc 83
>34072_ssc-mir-365-1:mirbase
Length = 80
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 54 tcataatgcccctaaaaatccttattg 80
|||||||||||||||||||||||||||
Sbjct: 51 tcataatgcccctaaaaatccttattg 77
