miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>26952_eca-mir-19a:mirbase
          Length = 82

 Score =  107 bits (54), Expect = 1e-24
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>27338_mdo-mir-19a:mirbase
          Length = 81

 Score =  107 bits (54), Expect = 1e-24
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>27593_sla-mir-19a:mirbase
          Length = 82

 Score =  107 bits (54), Expect = 1e-24
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>27658_mml-mir-19a:mirbase
          Length = 82

 Score =  107 bits (54), Expect = 1e-24
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>28264_ggo-mir-19a:mirbase
          Length = 82

 Score =  107 bits (54), Expect = 1e-24
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>28367_hsa-mir-19a:mirbase
          Length = 82

 Score =  107 bits (54), Expect = 1e-24
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>30048_ppa-mir-19a:mirbase
          Length = 82

 Score =  107 bits (54), Expect = 1e-24
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>30154_ptr-mir-19a:mirbase
          Length = 82

 Score =  107 bits (54), Expect = 1e-24
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>30759_ppy-mir-19a:mirbase
          Length = 82

 Score =  107 bits (54), Expect = 1e-24
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>31398_lca-mir-19a:mirbase
          Length = 82

 Score =  107 bits (54), Expect = 1e-24
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>31782_mmu-mir-19a:mirbase
          Length = 82

 Score =  107 bits (54), Expect = 1e-24
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>33136_bta-mir-19a:mirbase
          Length = 82

 Score =  107 bits (54), Expect = 1e-24
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>33919_ssc-mir-19a:mirbase
          Length = 82

 Score =  107 bits (54), Expect = 1e-24
 Identities = 66/70 (94%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>25901_gga-mir-19a:mirbase
          Length = 81

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          ||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaggaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>27484_age-mir-19a:mirbase
          Length = 82

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          ||||||||||||||||||||||||||||||||   || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagcatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>27545_lla-mir-19a:mirbase
          Length = 82

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          ||||||||||||||||||||||||||||||||   || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaagcatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>28176_mne-mir-19a:mirbase
          Length = 82

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          ||||||||||||||||||||||||||| |||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaggaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>31433_oan-mir-19a:mirbase
          Length = 140

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
           |||||||||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 52  ctgttagttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 111

                     
Query: 61  tgatggtggc 70
           ||| ||||||
Sbjct: 112 tgacggtggc 121




>32665_rno-mir-19a:mirbase
          Length = 82

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 65/70 (92%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          ||||| |||||||||||||||||||||||||||  || |||||||||||||||||||| |
Sbjct: 9  ctgttcgttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaac 68

                    
Query: 61 tgatggtggc 70
          ||||||||||
Sbjct: 69 tgatggtggc 78




>34551_fru-mir-19a:mirbase
          Length = 81

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                      
Query: 5  tagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagctgat 64
          ||||||||||||||||||||||||||| ||||  |||||||||||||||||||| |||||
Sbjct: 13 tagttttgcatagttgcactacaagaatagaggagttgtgcaaatctatgcaaaactgat 72

                
Query: 65 ggtggc 70
          ||||||
Sbjct: 73 ggtggc 78




>34699_tni-mir-19a:mirbase
          Length = 81

 Score = 99.6 bits (50), Expect = 2e-22
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                      
Query: 5  tagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagctgat 64
          ||||||||||||||||||||||||||| ||||  |||||||||||||||||||| |||||
Sbjct: 13 tagttttgcatagttgcactacaagaatagaggagttgtgcaaatctatgcaaaactgat 72

                
Query: 65 ggtggc 70
          ||||||
Sbjct: 73 ggtggc 78




>25707_xtr-mir-19a:mirbase
          Length = 81

 Score = 91.7 bits (46), Expect = 6e-20
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                      
Query: 1  ctgttagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagc 60
          ||||||||||||||||||||||||||||||| |  || |||||||||||||||||||| |
Sbjct: 9  ctgttagttttgcatagttgcactacaagaaaaatgtagttgtgcaaatctatgcaaaac 68

                
Query: 61 tgatgg 66
          ||||||
Sbjct: 69 tgatgg 74




>26630_cfa-mir-19a:mirbase
          Length = 58

 Score = 83.8 bits (42), Expect = 1e-17
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                    
Query: 6  agttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagctga 63
          ||||||||||||||||||||||||||||  || |||||||||||||||||||| ||||
Sbjct: 1  agttttgcatagttgcactacaagaagaatgtagttgtgcaaatctatgcaaaactga 58




>34214_dre-mir-19a:mirbase
          Length = 89

 Score = 83.8 bits (42), Expect = 1e-17
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                      
Query: 5  tagttttgcatagttgcactacaagaagagagtggttgtgcaaatctatgcaaagctgat 64
          ||||||||||||||||||||||||||| |  |  |||||||||||||||||||| |||||
Sbjct: 17 tagttttgcatagttgcactacaagaaaacgggagttgtgcaaatctatgcaaaactgat 76

                
Query: 65 ggtggc 70
          ||||||
Sbjct: 77 ggtggc 82