miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>26010_gga-mir-221:mirbase
Length = 99
Score = 145 bits (73), Expect = 5e-36
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 83
Query: 61 ttccagctgcctg 73
|||||||||||||
Sbjct: 84 ttccagctgcctg 96
>31951_mmu-mir-221:mirbase
Length = 95
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 20 acctggcatacaatgtagatttctgtgtttgttaggcaacagctacattgtctgctgggt 79
Query: 61 ttc 63
|||
Sbjct: 80 ttc 82
>32817_rno-mir-221:mirbase
Length = 109
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 25 acctggcatacaatgtagatttctgtgtttgttaggcaacagctacattgtctgctgggt 84
Query: 61 ttc 63
|||
Sbjct: 85 ttc 87
>33301_bta-mir-221:mirbase
Length = 110
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 25 acctggcatacaatgtagatttctgtgtttgttgagcaacagctacattgtctgctgggt 84
Query: 61 ttc 63
|||
Sbjct: 85 ttc 87
>31541_oan-mir-221:mirbase
Length = 93
Score = 113 bits (57), Expect = 2e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 19 acctggcatacaatgtagaattctgtatttgttaagcaacagctacattgtctgctgggt 78
Query: 61 ttccagctgcctg 73
||| |||| ||||
Sbjct: 79 ttcaagctacctg 91
>27819_mml-mir-221:mirbase
Length = 110
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 25 acctggcatacaatgtagatttctgtgttcgttaggcaacagctacattgtctgctgggt 84
Query: 61 ttc 63
|||
Sbjct: 85 ttc 87
>28336_ggo-mir-221:mirbase
Length = 110
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 25 acctggcatacaatgtagatttctgtgttcgttaggcaacagctacattgtctgctgggt 84
Query: 61 ttc 63
|||
Sbjct: 85 ttc 87
>28542_hsa-mir-221:mirbase
Length = 110
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 25 acctggcatacaatgtagatttctgtgttcgttaggcaacagctacattgtctgctgggt 84
Query: 61 ttc 63
|||
Sbjct: 85 ttc 87
>30123_ppa-mir-221:mirbase
Length = 110
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 25 acctggcatacaatgtagatttctgtgttcgttaggcaacagctacattgtctgctgggt 84
Query: 61 ttc 63
|||
Sbjct: 85 ttc 87
>30300_ptr-mir-221:mirbase
Length = 109
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 25 acctggcatacaatgtagatttctgtgttcgttaggcaacagctacattgtctgctgggt 84
Query: 61 ttc 63
|||
Sbjct: 85 ttc 87
>30916_ppy-mir-221:mirbase
Length = 110
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 25 acctggcatacaatgtagatttctgtgttcgttaggcaacagctacattgtctgctgggt 84
Query: 61 ttc 63
|||
Sbjct: 85 ttc 87
>34046_ssc-mir-221:mirbase
Length = 70
Score = 109 bits (55), Expect = 3e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4 acctggcatacaatgtagatttctgtgtttgttgggcaacagctacattgtctgctgggt 63
Query: 61 ttc 63
|||
Sbjct: 64 ttc 66
>26782_cfa-mir-221:mirbase
Length = 62
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 acctggcatacaatgtagatttctgtgtttgttgggcaacagctacattgtctgctgggt 60
Query: 61 tt 62
||
Sbjct: 61 tt 62
>27106_eca-mir-221:mirbase
Length = 110
Score = 101 bits (51), Expect = 6e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 25 acctggcatacaatgtagatttctgtgtttcttgggcaacagctacattgtctgctgggt 84
Query: 61 ttc 63
|||
Sbjct: 85 ttc 87
>27434_mdo-mir-221:mirbase
Length = 74
Score = 101 bits (51), Expect = 6e-23
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||
Sbjct: 7 acctggcatacaatgtagaattctgtgtttattaagtaacagctacattgtctgctgggt 66
Query: 61 ttc 63
|||
Sbjct: 67 ttc 69
>25840_xtr-mir-221:mirbase
Length = 93
Score = 85.7 bits (43), Expect = 4e-18
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 19 acctggcatacaatgtagaaaactgtgtttgcaaagcaacagctacattgtctgctgggt 78
Query: 61 ttc 63
|||
Sbjct: 79 ttc 81
>34381_dre-mir-221:mirbase
Length = 93
Score = 61.9 bits (31), Expect = 6e-11
Identities = 55/63 (87%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgtttgttaagcaacagctacattgtctgctgggt 60
|||||||||||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct: 8 acctggcatacaatgtagatttctgtgtggtactatctacagctacattgtctgctgggt 67
Query: 61 ttc 63
|||
Sbjct: 68 ttc 70
>34645_fru-mir-221:mirbase
Length = 77
Score = 61.9 bits (31), Expect = 6e-11
Identities = 59/66 (89%), Gaps = 3/66 (4%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgt--ttgttaagcaacagctacattgtctgctgg 58
|||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||
Sbjct: 6 acctggcatacaatgtagatttctgtgtgcttg-gattctacagctacattgtctgctgg 64
Query: 59 gtttcc 64
||||||
Sbjct: 65 gtttcc 70
>34793_tni-mir-221:mirbase
Length = 69
Score = 60.0 bits (30), Expect = 2e-10
Identities = 58/65 (89%), Gaps = 3/65 (4%)
Strand = Plus / Plus
Query: 1 acctggcatacaatgtagatttctgtgt--ttgttaagcaacagctacattgtctgctgg 58
|||||||||||||||||||||||||||| ||| | | ||||||||||||||||||||
Sbjct: 6 acctggcatacaatgtagatttctgtgtgcttg-gattctacagctacattgtctgctgg 64
Query: 59 gtttc 63
|||||
Sbjct: 65 gtttc 69
>25534_pma-mir-221:mirbase
Length = 80
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 36 gcaacagctacattgtctgctgggtt 61
||||||||||||||||||||||||||
Sbjct: 46 gcaacagctacattgtctgctgggtt 71
