miRNEST 2.0, an integrative microRNA resource :: BLAST
>40468_gma-MIR390a:mirbase
Length = 105
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 2 agaatctgtaaagctcaggagggatagcgccatggatg 39
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgccatggatg 38
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gcgctatccatcctgagtttca 92
||||||||||||||||||||||
Sbjct: 67 gcgctatccatcctgagtttca 88
>40467_gma-MIR390a:mirbase
Length = 105
Score = 75.8 bits (38), Expect = 5e-15
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 2 agaatctgtaaagctcaggagggatagcgccatggatg 39
||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagcgccatggatg 38
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gcgctatccatcctgagtttca 92
||||||||||||||||||||||
Sbjct: 67 gcgctatccatcctgagtttca 88
>41131_tcc-MIR390b:mirbase
Length = 120
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 gagaatctgtaaagctcaggagggatagcgccat 34
||||||||||||||||||||||||||||||||||
Sbjct: 10 gagaatctgtaaagctcaggagggatagcgccat 43
>41053_ghr-MIR390c:mirbase
Length = 114
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 2 agaatctgtaaagctcaggagggatagcgccatggatg 39
||||||||| ||||||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatggatg 38
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 67 tatagcgctatccatcctgagtttca 92
||||||||||||||||||||||||||
Sbjct: 83 tatagcgctatccatcctgagtttca 108
>41052_ghr-MIR390b:mirbase
Length = 132
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 2 agaatctgtaaagctcaggagggatagcgccatggatg 39
||||||||| ||||||||||||||||||||||||||||
Sbjct: 8 agaatctgttaagctcaggagggatagcgccatggatg 45
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 67 tatagcgctatccatcctgagtttca 92
||||||||||||||||||||||||||
Sbjct: 90 tatagcgctatccatcctgagtttca 115
>41051_ghr-MIR390a:mirbase
Length = 124
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 2 agaatctgtaaagctcaggagggatagcgccatggatg 39
||||||||| ||||||||||||||||||||||||||||
Sbjct: 5 agaatctgttaagctcaggagggatagcgccatggatg 42
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 67 tatagcgctatccatcctgagtttca 92
||||||||||||||||||||||||||
Sbjct: 87 tatagcgctatccatcctgagtttca 112
>40072_ath-MIR390a:mirbase
Length = 107
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 2 agaatctgtaaagctcaggagggatagcgccatg 35
||||||||||||||||||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccatg 41
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gcgctatccatcctgagtttca 92
||||||||||||||||||||||
Sbjct: 69 gcgctatccatcctgagtttca 90
>39862_aly-MIR390a:mirbase
Length = 129
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 2 agaatctgtaaagctcaggagggatagcgccatg 35
||||||||||||||||||||||||||||||||||
Sbjct: 19 agaatctgtaaagctcaggagggatagcgccatg 52
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gcgctatccatcctgagtttca 92
||||||||||||||||||||||
Sbjct: 80 gcgctatccatcctgagtttca 101
>40293_bna-MIR390b:mirbase
Length = 105
Score = 65.9 bits (33), Expect = 5e-12
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 2 agaatctgtaaagctcaggagggatagcgccat 34
|||||||||||||||||||||||||||||||||
Sbjct: 8 agaatctgtaaagctcaggagggatagcgccat 40
>41237_csi-MIR390:mirbase
Length = 154
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 2 agaatctgtaaagctcaggagggatagcgccatgg 36
||||||||| |||||||||||||||||||||||||
Sbjct: 11 agaatctgttaagctcaggagggatagcgccatgg 45
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gcgctatccatcctgagtttca 92
||||||||||||||||||||||
Sbjct: 98 gcgctatccatcctgagtttca 119
>41640_vvi-MIR390:mirbase
Length = 140
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 2 agaatctgtaaagctcaggagggatagcgccatg 35
||||||||| ||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatg 34
>41413_ptc-MIR390a:mirbase
Length = 119
Score = 60.0 bits (30), Expect = 3e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 2 agaatctgtaaagctcaggagggatagcgccatg 35
||||||||| ||||||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgccatg 34
>40372_rco-MIR390b:mirbase
Length = 122
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 12 aagctcaggagggatagcgccatggatgg 40
|||||||||||||||||||||||||||||
Sbjct: 6 aagctcaggagggatagcgccatggatgg 34
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 65 tctatagcgctatccatcctgagtttca 92
||||||||||||||||||||||||||||
Sbjct: 90 tctatagcgctatccatcctgagtttca 117
>40294_bna-MIR390c:mirbase
Length = 128
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 7 ctgtaaagctcaggagggatagcgccatg 35
|||||||||||||||||||||||||||||
Sbjct: 18 ctgtaaagctcaggagggatagcgccatg 46
>40292_bna-MIR390a:mirbase
Length = 144
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 7 ctgtaaagctcaggagggatagcgccatg 35
|||||||||||||||||||||||||||||
Sbjct: 28 ctgtaaagctcaggagggatagcgccatg 56
>40469_gma-MIR390b:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 5e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 2 agaatctgtaaagctcaggagggatagc 29
||||||||||||||||||||||||||||
Sbjct: 1 agaatctgtaaagctcaggagggatagc 28
>41416_ptc-MIR390d:mirbase
Length = 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 2 agaatctgtaaagctcaggagggatagcgcc 32
||||||||| |||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 71 gcgctatccatcctgagtttcactg 95
|||||||||||||||||||| ||||
Sbjct: 79 gcgctatccatcctgagttttactg 103
>41415_ptc-MIR390c:mirbase
Length = 123
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 5 atctgtaaagctcaggagggatagcgccatg 35
|||||| ||||||||||||||||||||||||
Sbjct: 4 atctgttaagctcaggagggatagcgccatg 34
>41414_ptc-MIR390b:mirbase
Length = 106
Score = 54.0 bits (27), Expect = 2e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 2 agaatctgtaaagctcaggagggatagcgcc 32
||||||||| |||||||||||||||||||||
Sbjct: 1 agaatctgttaagctcaggagggatagcgcc 31
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 71 gcgctatccatcctgagtttcactgctt 98
|||||||||||||||||||||| |||||
Sbjct: 79 gcgctatccatcctgagtttcattgctt 106
>40073_ath-MIR390b:mirbase
Length = 120
Score = 54.0 bits (27), Expect = 2e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 10 taaagctcaggagggatagcgccatgg 36
|||||||||||||||||||||||||||
Sbjct: 13 taaagctcaggagggatagcgccatgg 39
>39863_aly-MIR390b:mirbase
Length = 127
Score = 52.0 bits (26), Expect = 8e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 10 taaagctcaggagggatagcgccatg 35
||||||||||||||||||||||||||
Sbjct: 17 taaagctcaggagggatagcgccatg 42
>41130_tcc-MIR390a:mirbase
Length = 129
Score = 50.1 bits (25), Expect = 3e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 7 ctgtaaagctcaggagggatagcgccatggatg 39
|||| ||||||||||||||||||||||| ||||
Sbjct: 16 ctgttaagctcaggagggatagcgccattgatg 48
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 69 tagcgctatccatcctgagtttca 92
||||||||||||||||||||||||
Sbjct: 86 tagcgctatccatcctgagtttca 109
>40705_mtr-MIR390:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 7 ctgtaaagctcaggagggatagcgccat 34
|||| |||||||||||||||||||||||
Sbjct: 1 ctgttaagctcaggagggatagcgccat 28
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gcgctatccatcctgagtttca 92
||||||||||||||||||||||
Sbjct: 76 gcgctatccatcctgagtttca 97
>40371_rco-MIR390a:mirbase
Length = 108
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 71 gcgctatccatcctgagtttcac 93
|||||||||||||||||||||||
Sbjct: 82 gcgctatccatcctgagtttcac 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 7 ctgtaaagctcaggagggatagcgcc 32
|||| |||||||||||||||||||||
Sbjct: 1 ctgttaagctcaggagggatagcgcc 26
>39485_ppt-MIR390a:mirbase
Length = 137
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 12 aagctcaggagggatagcgccat 34
|||||||||||||||||||||||
Sbjct: 16 aagctcaggagggatagcgccat 38
>42785_zma-MIR390b:mirbase
Length = 192
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 aagctcaggagggatagcgcc 32
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42784_zma-MIR390a:mirbase
Length = 181
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 aagctcaggagggatagcgcc 32
|||||||||||||||||||||
Sbjct: 2 aagctcaggagggatagcgcc 22
>42565_sbi-MIR390:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 aagctcaggagggatagcgcc 32
|||||||||||||||||||||
Sbjct: 3 aagctcaggagggatagcgcc 23
>41996_osa-MIR390:mirbase
Length = 91
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 aagctcaggagggatagcgcc 32
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41773_bdi-MIR390b:mirbase
Length = 186
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 aagctcaggagggatagcgcc 32
|||||||||||||||||||||
Sbjct: 19 aagctcaggagggatagcgcc 39
>41772_bdi-MIR390:mirbase
Length = 209
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 aagctcaggagggatagcgcc 32
|||||||||||||||||||||
Sbjct: 31 aagctcaggagggatagcgcc 51
>39486_ppt-MIR390b:mirbase
Length = 175
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 12 aagctcaggagggatagcgcc 32
|||||||||||||||||||||
Sbjct: 28 aagctcaggagggatagcgcc 48
>39487_ppt-MIR390c:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 13 agctcaggagggatagcgcc 32
||||||||||||||||||||
Sbjct: 14 agctcaggagggatagcgcc 33
