miRNEST 2.0, an integrative microRNA resource :: BLAST
>41084_tcc-MIR156e:mirbase
Length = 123
Score = 63.9 bits (32), Expect = 3e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
||||||||||||||||||||||| ||||||||||||
Sbjct: 20 gttgacagaagatagagagcacagatgatgagatgc 55
Score = 50.1 bits (25), Expect = 5e-07
Identities = 41/45 (91%), Gaps = 1/45 (2%)
Strand = Plus / Plus
Query: 89 gcatttcacttcatttgtgctctctatgcttccgtcatcaccttt 133
|||||||||| | |||||||||||||| |||| ||||||||||||
Sbjct: 65 gcatttcactcc-tttgtgctctctattcttctgtcatcaccttt 108
>40010_ath-MIR157a:mirbase
Length = 98
Score = 60.0 bits (30), Expect = 5e-10
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatgagat 57
||||||||||||||||||||||| ||||||||||
Sbjct: 3 gttgacagaagatagagagcacagatgatgagat 36
>41525_sly-MIR156a:mirbase
Length = 100
Score = 58.0 bits (29), Expect = 2e-09
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 86 aaagcatttcacttcatttgtgctctctatgcttccgtcat 126
||||||| ||| ||||||||||||||||||||||| |||||
Sbjct: 60 aaagcatctcaattcatttgtgctctctatgcttctgtcat 100
Score = 50.1 bits (25), Expect = 5e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 25 ttgacagaagatagagagcacatatgatgagatgcta 61
||||||||||||||||||||| ||||||| ||||||
Sbjct: 1 ttgacagaagatagagagcactaatgatgatatgcta 37
>41569_vvi-MIR156i:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
||||||||||||||||||||||| ||||||| ||||
Sbjct: 10 gttgacagaagatagagagcacagatgatgaaatgc 45
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtcatcacctt 132
|||||||||||||| |||| |||||||||||
Sbjct: 67 tttgtgctctctattcttctgtcatcacctt 97
>41297_ptc-MIR156j:mirbase
Length = 100
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
||||||||||||||||||||||| ||||||| ||||
Sbjct: 10 gttgacagaagatagagagcacagatgatgatatgc 45
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtcatcac 129
||||||||||||||||||| ||||||||
Sbjct: 68 tttgtgctctctatgcttctgtcatcac 95
>41294_ptc-MIR156g:mirbase
Length = 103
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
||||||||||||||||||||||| ||||||| ||||
Sbjct: 10 gttgacagaagatagagagcacagatgatgaaatgc 45
>40655_mtr-MIR156h:mirbase
Length = 94
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
||||||||||||||||||||||| ||||||| ||||
Sbjct: 5 gttgacagaagatagagagcacagatgatgaaatgc 40
>40652_mtr-MIR156e:mirbase
Length = 172
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
||||||||||||||||||||||| ||||||| ||||
Sbjct: 5 gttgacagaagatagagagcacagatgatgatatgc 40
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtcatcacc 130
||||||||||||||||||| |||||||||
Sbjct: 144 tttgtgctctctatgcttctgtcatcacc 172
>40428_gma-MIR156d:mirbase
Length = 151
Score = 56.0 bits (28), Expect = 8e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
||||||||||||||||||||||| ||||||| ||||
Sbjct: 20 gttgacagaagatagagagcacagatgatgatatgc 55
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtcatcacctt 132
|||||||||||||| |||| |||||||||||
Sbjct: 108 tttgtgctctctatacttctgtcatcacctt 138
>41567_vvi-MIR156g:mirbase
Length = 103
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatga 54
||||||||||||||||||||||| |||||||
Sbjct: 10 gttgacagaagatagagagcacagatgatga 40
>40337_rco-MIR156h:mirbase
Length = 97
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatga 54
||||||||||||||||||||||| |||||||
Sbjct: 5 gttgacagaagatagagagcacagatgatga 35
Score = 54.0 bits (27), Expect = 3e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtcatcacctt 132
||||||||||||||||||| |||||||||||
Sbjct: 66 tttgtgctctctatgcttctgtcatcacctt 96
>41296_ptc-MIR156i:mirbase
Length = 99
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatg 53
||||||||||||||||||||||| ||||||
Sbjct: 10 gttgacagaagatagagagcacagatgatg 39
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtcatcacctt 132
||||||||||||||||||| | |||||||||
Sbjct: 68 tttgtgctctctatgcttctgccatcacctt 98
>41163_aqc-MIR156b:mirbase
Length = 83
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 26 tgacagaagatagagagcacatatgatgagatgc 59
||||||||||||||||||||| ||||||| ||||
Sbjct: 1 tgacagaagatagagagcacagatgatgatatgc 34
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtcatc 127
||||||||||||||||||| ||||||
Sbjct: 58 tttgtgctctctatgcttctgtcatc 83
>41077_gra-MIR157b:mirbase
Length = 91
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatg 53
||||||||||||||||||||||| ||||||
Sbjct: 4 gttgacagaagatagagagcacagatgatg 33
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtcatca 128
||||||||||||||||||| |||||||
Sbjct: 63 tttgtgctctctatgcttctgtcatca 89
>41076_gra-MIR157a:mirbase
Length = 101
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatg 53
||||||||||||||||||||||| ||||||
Sbjct: 4 gttgacagaagatagagagcacagatgatg 33
>40013_ath-MIR157d:mirbase
Length = 221
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 104 tgtgctctctatgcttccgtcatcaccttt 133
||||||||||||||||| ||||||||||||
Sbjct: 172 tgtgctctctatgcttctgtcatcaccttt 201
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 26 tgacagaagatagagagcac 45
||||||||||||||||||||
Sbjct: 24 tgacagaagatagagagcac 43
>40011_ath-MIR157b:mirbase
Length = 132
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatgagat 57
||||||||||||||||||||||| ||||| ||||
Sbjct: 18 gttgacagaagatagagagcacagatgataagat 51
>39801_aly-MIR157d:mirbase
Length = 256
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 104 tgtgctctctatgcttccgtcatcaccttt 133
||||||||||||||||| ||||||||||||
Sbjct: 190 tgtgctctctatgcttctgtcatcaccttt 219
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 26 tgacagaagatagagagcac 45
||||||||||||||||||||
Sbjct: 38 tgacagaagatagagagcac 57
>39798_aly-MIR157a:mirbase
Length = 123
Score = 52.0 bits (26), Expect = 1e-07
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatgagat 57
||||||||||||||||||||||| ||||| ||||
Sbjct: 15 gttgacagaagatagagagcacagatgataagat 48
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtcatcaccttt 133
||||||||||||| |||| ||||||||||||
Sbjct: 82 tttgtgctctctagccttctgtcatcaccttt 113
>40653_mtr-MIR156f:mirbase
Length = 94
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacat 47
||||||||||||||||||||||||
Sbjct: 5 gttgacagaagatagagagcacat 28
>40429_gma-MIR156e:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
|||||||||||||||||||||| ||||||| ||||
Sbjct: 20 gttgacagaagatagagagcactgatgatgaaatgc 55
>40395_ahy-MIR156b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
||||||||||||||||||||||| | ||||| ||||
Sbjct: 22 gttgacagaagatagagagcacaaaagatgatatgc 57
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtcatcac 129
||||||||||||| ||||| ||||||||
Sbjct: 89 tttgtgctctctaagcttctgtcatcac 116
>40394_ahy-MIR156b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatgatgagatgc 59
||||||||||||||||||||||| | ||||| ||||
Sbjct: 22 gttgacagaagatagagagcacaaaagatgatatgc 57
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtcatcac 129
||||||||||||| ||||| ||||||||
Sbjct: 89 tttgtgctctctaagcttctgtcatcac 116
>39799_aly-MIR157b:mirbase
Length = 97
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcacatatga 51
||||||||||||||||||||||| ||||
Sbjct: 3 gttgacagaagatagagagcacagatga 30
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtcatcac 129
||||||||||||| ||||| ||||||||
Sbjct: 70 tttgtgctctctaagcttctgtcatcac 97
>41566_vvi-MIR156f:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcaca 46
|||||||||||||||||||||||
Sbjct: 10 gttgacagaagatagagagcaca 32
>41085_tcc-MIR156f:mirbase
Length = 124
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcaca 46
|||||||||||||||||||||||
Sbjct: 20 gttgacagaagatagagagcaca 42
>40431_gma-MIR156g:mirbase
Length = 118
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcaca 46
|||||||||||||||||||||||
Sbjct: 23 gttgacagaagatagagagcaca 45
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 25 ttgacagaagatagagagcaca 46
||||||||||||||||||||||
Sbjct: 107 ttgacagaagatagagagcaca 86
>40427_gma-MIR156c:mirbase
Length = 185
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcaca 46
|||||||||||||||||||||||
Sbjct: 145 gttgacagaagatagagagcaca 167
>40335_rco-MIR156f:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 7e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcaca 46
|||||||||||||||||||||||
Sbjct: 5 gttgacagaagatagagagcaca 27
>41295_ptc-MIR156h:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcac 45
||||||||||||||||||||||
Sbjct: 10 gttgacagaagatagagagcac 31
>41162_aqc-MIR156a:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 26 tgacagaagatagagagcacatatga 51
||||||||||||||||||||| ||||
Sbjct: 1 tgacagaagatagagagcacagatga 26
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtca 125
||||||||||||||||||| ||||
Sbjct: 56 tttgtgctctctatgcttctgtca 79
>40654_mtr-MIR156g:mirbase
Length = 120
Score = 44.1 bits (22), Expect = 3e-05
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 89 gcatttcacttcatttgtgctctctatgcttccgtcatcacc 130
|||||||| ||| ||||||||||||| |||| |||||||||
Sbjct: 79 gcatttcatttcctttgtgctctctagacttctgtcatcacc 120
>40336_rco-MIR156g:mirbase
Length = 97
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcac 45
||||||||||||||||||||||
Sbjct: 5 gttgacagaagatagagagcac 26
>40310_bra-MIR157a:mirbase
Length = 149
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcac 45
||||||||||||||||||||||
Sbjct: 13 gttgacagaagatagagagcac 34
>40304_bol-MIR157a:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcac 45
||||||||||||||||||||||
Sbjct: 5 gttgacagaagatagagagcac 26
>40260_bna-MIR156c:mirbase
Length = 155
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcac 45
||||||||||||||||||||||
Sbjct: 17 gttgacagaagatagagagcac 38
>40259_bna-MIR156b:mirbase
Length = 208
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcac 45
||||||||||||||||||||||
Sbjct: 24 gttgacagaagatagagagcac 45
>40012_ath-MIR157c:mirbase
Length = 217
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcac 45
||||||||||||||||||||||
Sbjct: 23 gttgacagaagatagagagcac 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtcatcaccttta 134
|||||||||||||| |||| |||| ||||||||
Sbjct: 165 tttgtgctctctatacttctgtcaccaccttta 197
>39800_aly-MIR157c:mirbase
Length = 293
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 24 gttgacagaagatagagagcac 45
||||||||||||||||||||||
Sbjct: 54 gttgacagaagatagagagcac 75
Score = 42.1 bits (21), Expect = 1e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 102 tttgtgctctctatgcttccgtcatcaccttta 134
|||||||||||||| |||| |||| ||||||||
Sbjct: 216 tttgtgctctctatacttctgtcaccaccttta 248
>39415_pta-MIR156a:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 26 tgacagaagatagagagcacat 47
||||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcacat 24
>41867_far-MIR156b:mirbase
Length = 180
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 gagttgacagaagatagagagcaca 46
|||||||||||||| ||||||||||
Sbjct: 50 gagttgacagaagagagagagcaca 74
>41866_far-MIR156a:mirbase
Length = 180
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 gagttgacagaagatagagagcaca 46
|||||||||||||| ||||||||||
Sbjct: 50 gagttgacagaagagagagagcaca 74
>41726_bdi-MIR156:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 22 gagttgacagaagatagagagcaca 46
|||||||||||||| ||||||||||
Sbjct: 97 gagttgacagaagagagagagcaca 121
>41527_sly-MIR156c:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 25 ttgacagaagatagagagcac 45
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>41526_sly-MIR156b:mirbase
Length = 84
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 25 ttgacagaagatagagagcac 45
|||||||||||||||||||||
Sbjct: 1 ttgacagaagatagagagcac 21
>39727_smo-MIR156b:mirbase
Length = 112
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 tgacagaagatagagagcaca 46
|||||||||||||||||||||
Sbjct: 12 tgacagaagatagagagcaca 32
>39416_pta-MIR156b:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 26 tgacagaagatagagagcaca 46
|||||||||||||||||||||
Sbjct: 3 tgacagaagatagagagcaca 23
