miRNEST 2.0, an integrative microRNA resource :: BLAST
>41126_tcc-MIR172c:mirbase
Length = 163
Score = 54.0 bits (27), Expect = 4e-08
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 11 atatgttagatgatgcagcatcatcaagattccca 45
||||||| | |||||||||||||||||||||||||
Sbjct: 155 atatgtttgctgatgcagcatcatcaagattccca 121
Score = 46.1 bits (23), Expect = 9e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 127 tttgtgaatcttgatgatgttgcatcctcaaacactgac 165
||||||||||||||||||| ||||| |||||||||||
Sbjct: 45 tttgtgaatcttgatgatgccgcatctgcaaacactgac 7
>41124_tcc-MIR172a:mirbase
Length = 154
Score = 50.1 bits (25), Expect = 6e-07
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 123 aagttttgtgaatcttgatgatgttgcatcctcaaacactgactg 167
||||||||||||||||||||||| | |||| |||||| ||||||
Sbjct: 46 aagttttgtgaatcttgatgatgctccatcagcaaacagtgactg 2
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattccca 45
||||||||||||||||||||||
Sbjct: 134 tgcagcatcatcaagattccca 113
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 21 tgatgcagcatcatcaagattcccaaaa 48
||||| |||||||||||||||| |||||
Sbjct: 16 tgatggagcatcatcaagattcacaaaa 43
>40067_ath-MIR172e:mirbase
Length = 125
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattccca 45
|||||||||||||||||||||||||
Sbjct: 117 tgatgcagcatcatcaagattccca 93
>39856_aly-MIR172e:mirbase
Length = 133
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattccca 45
|||||||||||||||||||||||||
Sbjct: 120 tgatgcagcatcatcaagattccca 96
>41991_osa-MIR172b:mirbase
Length = 238
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattccca 45
||||||||||||||||||||||||
Sbjct: 229 gatgcagcatcatcaagattccca 206
>41768_bdi-MIR172b:mirbase
Length = 254
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattccca 45
||||||||||||||||||||||||
Sbjct: 225 gatgcagcatcatcaagattccca 202
>41634_vvi-MIR172d:mirbase
Length = 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 15 gttagatgatgcagcatcatcaagattc 42
||||| ||||||||||||||||||||||
Sbjct: 1 gttagctgatgcagcatcatcaagattc 28
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 129 tgtgaatcttgatgatgttgcatc 152
||||||||||||||||| ||||||
Sbjct: 31 tgtgaatcttgatgatgctgcatc 8
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 99 atgcagcatcatcaagattc 80
>41399_ptc-MIR172e:mirbase
Length = 133
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattccca 45
||||||||||||||||||||||||
Sbjct: 125 gatgcagcatcatcaagattccca 102
>41398_ptc-MIR172d:mirbase
Length = 182
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattccca 45
||||||||||||||||||||||||
Sbjct: 174 gatgcagcatcatcaagattccca 151
>41184_aqc-MIR172b:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattccca 45
||||||||||||||||||||||||
Sbjct: 107 gatgcagcatcatcaagattccca 84
>42779_zma-MIR172e:mirbase
Length = 174
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattccca 45
|||||||||||||||||||||||
Sbjct: 155 atgcagcatcatcaagattccca 133
>42558_sbi-MIR172b:mirbase
Length = 170
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattccca 45
|||||||||||||||||||||||
Sbjct: 170 atgcagcatcatcaagattccca 148
>41402_ptc-MIR172h:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattcccaa 46
|||||||||||||||||||||||
Sbjct: 133 tgcagcatcatcaagattcccaa 111
>41401_ptc-MIR172g:mirbase
Length = 143
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattcccaa 46
|||||||||||||||||||||||
Sbjct: 133 tgcagcatcatcaagattcccaa 111
>41993_osa-MIR172d:mirbase
Length = 130
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 113 tgatgcagcatcatcaagattc 92
>41633_vvi-MIR172c:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattccca 45
||||||||||||||||||||||
Sbjct: 127 tgcagcatcatcaagattccca 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 128 ttgtgaatcttgatgatgttgcatcctcaaac 159
|||||||||||||||||| | ||||| |||||
Sbjct: 32 ttgtgaatcttgatgatgctccatccgcaaac 1
>41397_ptc-MIR172c:mirbase
Length = 128
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 121 tgatgcagcatcatcaagattc 100
>41395_ptc-MIR172a:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 122 tgatgcagcatcatcaagattc 101
>41183_aqc-MIR172a:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 120 tgatgcagcatcatcaagattc 99
>40463_gma-MIR172f:mirbase
Length = 133
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 131 tgatgcagcatcatcaagattc 110
>40462_gma-MIR172e:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattccca 45
||||||||||||||||||||||
Sbjct: 133 tgcagcatcatcaagattccca 112
>40461_gma-MIR172d:mirbase
Length = 150
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattccca 45
||||||||||||||||||||||
Sbjct: 130 tgcagcatcatcaagattccca 109
>40460_gma-MIR172c:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattccca 45
||||||||||||||||||||||
Sbjct: 133 tgcagcatcatcaagattccca 112
>40459_gma-MIR172b:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 136 tgatgcagcatcatcaagattc 115
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 129 tgtgaatcttgatgatgttgcatcctcaaaca 160
||||||||||||||||| | ||||| ||||||
Sbjct: 43 tgtgaatcttgatgatgctacatccgcaaaca 12
>40458_gma-MIR172a:mirbase
Length = 159
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 142 tgatgcagcatcatcaagattc 121
>40366_rco-MIR172:mirbase
Length = 144
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattccca 45
||||||||||||||||||||||
Sbjct: 138 tgcagcatcatcaagattccca 117
>40324_bra-MIR172b:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 104 tgatgcagcatcatcaagattc 83
>40323_bra-MIR172a:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 109 tgatgcagcatcatcaagattc 88
>40307_bol-MIR172b:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 104 tgatgcagcatcatcaagattc 83
>40306_bol-MIR172a:mirbase
Length = 119
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 109 tgatgcagcatcatcaagattc 88
>40064_ath-MIR172b:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 93 tgatgcagcatcatcaagattc 72
>39853_aly-MIR172b:mirbase
Length = 146
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 21 tgatgcagcatcatcaagattc 42
||||||||||||||||||||||
Sbjct: 115 tgatgcagcatcatcaagattc 94
>41990_osa-MIR172a:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 100 gatgcagcatcatcaagattc 80
>41767_bdi-MIR172a:mirbase
Length = 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 120 gatgcagcatcatcaagattc 100
>41725_ata-MIR172:mirbase
Length = 277
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 230 gatgcagcatcatcaagattc 210
>41632_vvi-MIR172b:mirbase
Length = 118
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 8 gatgcagcatcatcaagattc 28
>41631_vvi-MIR172a:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 8 gatgcagcatcatcaagattc 28
>41400_ptc-MIR172f:mirbase
Length = 161
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 153 gatgcagcatcatcaagattc 133
>41396_ptc-MIR172b:mirbase
Length = 140
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 132 gatgcagcatcatcaagattc 112
>41128_tcc-MIR172e:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 170 gatgcagcatcatcaagattc 150
>41125_tcc-MIR172b:mirbase
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 141 gatgcagcatcatcaagattc 121
>40063_ath-MIR172a:mirbase
Length = 102
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 99 gatgcagcatcatcaagattc 79
>39852_aly-MIR172a:mirbase
Length = 149
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 22 gatgcagcatcatcaagattc 42
|||||||||||||||||||||
Sbjct: 120 gatgcagcatcatcaagattc 100
>42778_zma-MIR172d:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 74 atgcagcatcatcaagattc 55
>42777_zma-MIR172c:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 123 atgcagcatcatcaagattc 104
>42776_zma-MIR172b:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 126 atgcagcatcatcaagattc 107
>42775_zma-MIR172a:mirbase
Length = 83
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 83 atgcagcatcatcaagattc 64
>42560_sbi-MIR172d:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 88 atgcagcatcatcaagattc 69
>42559_sbi-MIR172c:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 119 atgcagcatcatcaagattc 100
>42557_sbi-MIR172a:mirbase
Length = 102
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 102 atgcagcatcatcaagattc 83
>41543_sly-MIR172b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 135 atgcagcatcatcaagattc 116
>41542_sly-MIR172a:mirbase
Length = 106
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 23 atgcagcatcatcaagattc 42
||||||||||||||||||||
Sbjct: 106 atgcagcatcatcaagattc 87
>41235_csi-MIR172c:mirbase
Length = 163
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattcc 43
||||||||||||||||||||
Sbjct: 139 tgcagcatcatcaagattcc 120
>40066_ath-MIR172d:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattcccaaa 47
||||||||||||||||||| ||||
Sbjct: 107 tgcagcatcatcaagattctcaaa 84
>39855_aly-MIR172d:mirbase
Length = 163
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 24 tgcagcatcatcaagattcccaaa 47
||||||||||||||||||| ||||
Sbjct: 131 tgcagcatcatcaagattctcaaa 108
