miRNEST 2.0, an integrative microRNA resource :: BLAST
>26994_eca-mir-98:mirbase
Length = 119
Score = 159 bits (80), Expect = 4e-40
Identities = 80/80 (100%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 81
Query: 61 atacaacttactactttccc 80
||||||||||||||||||||
Sbjct: 82 atacaacttactactttccc 101
>33955_ssc-mir-98:mirbase
Length = 80
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 63
Query: 61 atacaacttactacttt 77
|||||||||||||||||
Sbjct: 64 atacaacttactacttt 80
>28411_hsa-mir-98:mirbase
Length = 119
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 22 tgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataact 81
Query: 61 atacaacttactactttccc 80
||||||||||||||||||||
Sbjct: 82 atacaacttactactttccc 101
>30195_ptr-mir-98:mirbase
Length = 119
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 22 tgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataact 81
Query: 61 atacaacttactactttccc 80
||||||||||||||||||||
Sbjct: 82 atacaacttactactttccc 101
>32705_rno-mir-98:mirbase
Length = 108
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 16 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaataagaagataact 75
Query: 61 atacaacttactactttccc 80
||||||||||||||||||||
Sbjct: 76 atacaacttactactttccc 95
>33184_bta-mir-98:mirbase
Length = 119
Score = 151 bits (76), Expect = 9e-38
Identities = 79/80 (98%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 22 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaatttgaagataact 81
Query: 61 atacaacttactactttccc 80
||||||||||||||||||||
Sbjct: 82 atacaacttactactttccc 101
>27500_age-mir-98:mirbase
Length = 80
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2 tgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataact 61
Query: 61 atacaacttactactttcc 79
|||||||||||||||||||
Sbjct: 62 atacaacttactactttcc 80
>27701_mml-mir-98:mirbase
Length = 80
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2 tgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataact 61
Query: 61 atacaacttactactttcc 79
|||||||||||||||||||
Sbjct: 62 atacaacttactactttcc 80
>28291_ggo-mir-98:mirbase
Length = 80
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2 tgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataact 61
Query: 61 atacaacttactactttcc 79
|||||||||||||||||||
Sbjct: 62 atacaacttactactttcc 80
>30078_ppa-mir-98:mirbase
Length = 80
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2 tgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataact 61
Query: 61 atacaacttactactttcc 79
|||||||||||||||||||
Sbjct: 62 atacaacttactactttcc 80
>30801_ppy-mir-98:mirbase
Length = 80
Score = 149 bits (75), Expect = 3e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 2 tgaggtagtaagttgtattgttgtggggtagggatattaggccccaattagaagataact 61
Query: 61 atacaacttactactttcc 79
|||||||||||||||||||
Sbjct: 62 atacaacttactactttcc 80
>31824_mmu-mir-98:mirbase
Length = 108
Score = 141 bits (71), Expect = 8e-35
Identities = 77/79 (97%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 16 tgaggtagtaagttgtattgttgtggggtagggattttaggccccagtaagaagataact 75
Query: 61 atacaacttactactttcc 79
|||||||||||||||||||
Sbjct: 76 atacaacttactactttcc 94
>31469_oan-mir-98:mirbase
Length = 149
Score = 93.7 bits (47), Expect = 2e-20
Identities = 75/82 (91%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggatt--ttaggccccaattagaagataa 58
|||||||||||||||||||||||||||||||||||| || ||||||||||| |||||
Sbjct: 31 tgaggtagtaagttgtattgttgtggggtagggatttcttttgccccaattag-cgataa 89
Query: 59 ctatacaacttactactttccc 80
|||||||| |||||||||||||
Sbjct: 90 ctatacaatttactactttccc 111
>25753_xtr-mir-98:mirbase
Length = 108
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtgggg 28
||||||||||||||||||||||||||||
Sbjct: 17 tgaggtagtaagttgtattgttgtgggg 44
>27321_mdo-let-7b:mirbase
Length = 88
Score = 50.1 bits (25), Expect = 2e-07
Identities = 61/72 (84%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
|||||||||| ||||| | ||| |||||| |||||| |||||||| |||||||||||
Sbjct: 8 tgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcagaagataact 65
Query: 61 atacaacttact 72
||||||| ||||
Sbjct: 66 atacaacctact 77
>26610_cfa-let-7f:mirbase
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggatttta 39
|||||||||| |||||| |||||||||||| |||||||
Sbjct: 1 tgaggtagtagattgtatagttgtggggtagtgatttta 39
>26934_eca-let-7f:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggatttta 39
|||||||||| |||||| |||||||||||| |||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgatttta 45
>27323_mdo-let-7f-1:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggatttta 39
|||||||||| |||||| |||||||||||| |||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgatttta 45
>27636_mml-let-7f-1:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggatttta 39
|||||||||| |||||| |||||||||||| |||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgatttta 45
>28346_hsa-let-7f-1:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggatttta 39
|||||||||| |||||| |||||||||||| |||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgatttta 45
>30133_ptr-let-7f-1:mirbase
Length = 86
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggatttta 39
|||||||||| |||||| |||||||||||| |||||||
Sbjct: 6 tgaggtagtagattgtatagttgtggggtagtgatttta 44
>30738_ppy-let-7f-1:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggatttta 39
|||||||||| |||||| |||||||||||| |||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgatttta 45
>31759_mmu-let-7f-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggatttta 39
|||||||||| |||||| |||||||||||| |||||||
Sbjct: 8 tgaggtagtagattgtatagttgtggggtagtgatttta 46
>32645_rno-let-7f-1:mirbase
Length = 89
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggatttta 39
|||||||||| |||||| |||||||||||| |||||||
Sbjct: 8 tgaggtagtagattgtatagttgtggggtagtgatttta 46
>33101_rno-mir-3596d:mirbase
Length = 97
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggatttta 39
|||||||||| |||||| |||||||||||| |||||||
Sbjct: 86 tgaggtagtagattgtatagttgtggggtagtgatttta 48
>33115_bta-let-7f-1:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggatttta 39
|||||||||| |||||| |||||||||||| |||||||
Sbjct: 7 tgaggtagtagattgtatagttgtggggtagtgatttta 45
>25871_gga-let-7b:mirbase
Length = 85
Score = 42.1 bits (21), Expect = 6e-05
Identities = 60/72 (83%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
|||||||||| ||||| | ||| |||||| |||||| |||||||| || ||||||||
Sbjct: 6 tgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcaggagataact 63
Query: 61 atacaacttact 72
||||||| ||||
Sbjct: 64 atacaacctact 75
>26379_tgu-let-7b:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 6e-05
Identities = 60/72 (83%), Gaps = 2/72 (2%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgtggggtagggattttaggccccaattagaagataact 60
|||||||||| ||||| | ||| |||||| |||||| |||||||| || ||||||||
Sbjct: 11 tgaggtagtaggttgtgtggtttcagggtagtgatttt--gccccaatcaggagataact 68
Query: 61 atacaacttact 72
||||||| ||||
Sbjct: 69 atacaacctact 80
>31410_oan-let-7b:mirbase
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 41 gccccaattagaagataactataca 65
|||||||| ||||||||||||||||
Sbjct: 43 gccccaatcagaagataactataca 67
>34167_dre-let-7a-3:mirbase
Length = 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 agataactatacaacttact 72
||||||||||||||||||||
Sbjct: 62 agataactatacaacttact 81
>34181_dre-let-7h:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgt 24
|||||||||||||||| |||||||
Sbjct: 19 tgaggtagtaagttgtgttgttgt 42
>34526_fru-let-7a-2:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 agataactatacaacttact 72
||||||||||||||||||||
Sbjct: 48 agataactatacaacttact 67
>34532_fru-let-7h:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgt 24
|||||||||||||||| |||||||
Sbjct: 6 tgaggtagtaagttgtgttgttgt 29
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 agataactatacaacttact 72
||||||||||||||||||||
Sbjct: 57 agataactatacaacttact 76
>34674_tni-let-7a-2:mirbase
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 agataactatacaacttact 72
||||||||||||||||||||
Sbjct: 56 agataactatacaacttact 75
>34680_tni-let-7h:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 tgaggtagtaagttgtattgttgt 24
|||||||||||||||| |||||||
Sbjct: 18 tgaggtagtaagttgtgttgttgt 41
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 53 agataactatacaacttact 72
||||||||||||||||||||
Sbjct: 72 agataactatacaacttact 91
>27632_mml-let-7b:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 50 agaagataactatacaacttact 72
|||||||||||||||||| ||||
Sbjct: 51 agaagataactatacaacctact 73
>30129_ptr-let-7b:mirbase
Length = 82
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 50 agaagataactatacaacttact 72
|||||||||||||||||| ||||
Sbjct: 50 agaagataactatacaacctact 72
>30734_ppy-let-7b:mirbase
Length = 83
Score = 38.2 bits (19), Expect = 9e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 50 agaagataactatacaacttact 72
|||||||||||||||||| ||||
Sbjct: 51 agaagataactatacaacctact 73
