miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00104;mir-10;ABRQ01276450.1/1328-1256 9813:Procavia capensis
(cape rock hyrax)
Length = 73
Score = 107 bits (54), Expect = 1e-23
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 cacccgtagaaccgaccttgcggggccttcgccgcacacaagctcgagtctgtgggtc 58
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 8 cacccgtagaaccgaccttgcggggccttcgccgcacacaagctcgtgtctgtgggtc 65
>RF00104;mir-10;ABQO010340902.1/106-34 9315:Macropus eugenii
(tammar wallaby)
Length = 73
Score = 71.9 bits (36), Expect = 8e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 1 cacccgtagaaccgaccttgcggggccttcgccgcacacaagctcgagtctgtgggtctg 60
|||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 8 cacccgtagatccgaccttgcggggcgccggccacacacaagctcgagtctgtgggtctg 67
>RF00104;mir-10;ABRT010769923.1/1062-1134 9478:Tarsius syrichta
(Philippine tarsier)
Length = 73
Score = 54.0 bits (27), Expect = 2e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 1 cacccgtagaaccgaccttgcggggccttcgccgcacacaagctcgagtctgtgg 55
|||||||| |||||||||||| | || |||||| |||||| ||||| ||||||||
Sbjct: 8 cacccgtacaaccgaccttgccgcgcattcgccacacacatgctcgggtctgtgg 62
>RF00104;mir-10;AAWZ01007717.1/44986-44914 28377:Anolis
carolinensis (green anole)
Length = 73
Score = 46.1 bits (23), Expect = 4e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 35 cacacaagctcgagtctgtgggt 57
|||||||||||||||||||||||
Sbjct: 42 cacacaagctcgagtctgtgggt 64
