miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>25933_gga-mir-103-1:mirbase
Length = 78
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 68
Query: 61 ga 62
||
Sbjct: 69 ga 70
>26444_tgu-mir-103-1:mirbase
Length = 113
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 101
Query: 61 ga 62
||
Sbjct: 102 ga 103
>26446_tgu-mir-103-3:mirbase
Length = 113
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 101
Query: 61 ga 62
||
Sbjct: 102 ga 103
>27367_mdo-mir-103-1:mirbase
Length = 76
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 66
Query: 61 ga 62
||
Sbjct: 67 ga 68
>27503_age-mir-103:mirbase
Length = 78
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 68
Query: 61 ga 62
||
Sbjct: 69 ga 70
>27565_lla-mir-103:mirbase
Length = 78
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 68
Query: 61 ga 62
||
Sbjct: 69 ga 70
>27707_mml-mir-103-1:mirbase
Length = 78
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 68
Query: 61 ga 62
||
Sbjct: 69 ga 70
>28203_mne-mir-103:mirbase
Length = 78
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 68
Query: 61 ga 62
||
Sbjct: 69 ga 70
>28295_ggo-mir-103:mirbase
Length = 78
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 68
Query: 61 ga 62
||
Sbjct: 69 ga 70
>28417_hsa-mir-103a-1:mirbase
Length = 78
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 68
Query: 61 ga 62
||
Sbjct: 69 ga 70
>28419_hsa-mir-103b-1:mirbase
Length = 62
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Minus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 3
Query: 61 ga 62
||
Sbjct: 2 ga 1
>30082_ppa-mir-103:mirbase
Length = 78
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 68
Query: 61 ga 62
||
Sbjct: 69 ga 70
>30201_ptr-mir-103-1:mirbase
Length = 78
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 68
Query: 61 ga 62
||
Sbjct: 69 ga 70
>30807_ppy-mir-103:mirbase
Length = 78
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 68
Query: 61 ga 62
||
Sbjct: 69 ga 70
>31474_oan-mir-103-1:mirbase
Length = 124
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 97
Query: 61 ga 62
||
Sbjct: 98 ga 99
>31831_mmu-mir-103-1:mirbase
Length = 86
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 72
Query: 61 ga 62
||
Sbjct: 73 ga 74
>32711_rno-mir-103-1:mirbase
Length = 86
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 72
Query: 61 ga 62
||
Sbjct: 73 ga 74
>33190_bta-mir-103-1:mirbase
Length = 72
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 66
Query: 61 ga 62
||
Sbjct: 67 ga 68
>33961_ssc-mir-103-1:mirbase
Length = 82
Score = 123 bits (62), Expect = 1e-29
Identities = 62/62 (100%)
Strand = Plus / Plus
Query: 1 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 tcggcttctttacagtgctgccttgttgcatatggatcaagcagcattgtacagggctat 70
Query: 61 ga 62
||
Sbjct: 71 ga 72