miRNEST 2.0, an integrative microRNA resource :: BLAST
>27772_mml-mir-181d:mirbase
Length = 137
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttgtgaggacggaggccagacccaccgagggatgaatg 60
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 36 aacattcattgttgtcggtgggttgtgaggaccgaggccagacccaccgggggatgaatg 95
Query: 61 tcac 64
||||
Sbjct: 96 tcac 99
>28488_hsa-mir-181d:mirbase
Length = 137
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttgtgaggacggaggccagacccaccgagggatgaatg 60
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 36 aacattcattgttgtcggtgggttgtgaggactgaggccagacccaccgggggatgaatg 95
Query: 61 tcac 64
||||
Sbjct: 96 tcac 99
>30256_ptr-mir-181d:mirbase
Length = 136
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttgtgaggacggaggccagacccaccgagggatgaatg 60
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 35 aacattcattgttgtcggtgggttgtgaggaccgaggccagacccaccgggggatgaatg 94
Query: 61 tcac 64
||||
Sbjct: 95 tcac 98
>30870_ppy-mir-181d:mirbase
Length = 136
Score = 111 bits (56), Expect = 6e-26
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttgtgaggacggaggccagacccaccgagggatgaatg 60
|||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 35 aacattcattgttgtcggtgggttgtgaggaccgaggccagacccaccgggggatgaatg 94
Query: 61 tcac 64
||||
Sbjct: 95 tcac 98
>34011_ssc-mir-181d:mirbase
Length = 80
Score = 111 bits (56), Expect = 6e-26
Identities = 63/64 (98%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttgtgaggacggaggccagacccaccgagggatgaatg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 aacattcattgttgtcggtgggttgtgag-acggaggccagacccaccgagggatgaatg 67
Query: 61 tcac 64
||||
Sbjct: 68 tcac 71
>34012_ssc-mir-181d:mirbase
Length = 80
Score = 111 bits (56), Expect = 6e-26
Identities = 63/64 (98%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttgtgaggacggaggccagacccaccgagggatgaatg 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 9 aacattcattgttgtcggtgggttgtgag-acggaggccagacccaccgagggatgaatg 67
Query: 61 tcac 64
||||
Sbjct: 68 tcac 71
>31897_mmu-mir-181d:mirbase
Length = 72
Score = 87.7 bits (44), Expect = 8e-19
Identities = 60/64 (93%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttgtgaggacggaggccagacccaccgagggatgaatg 60
||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||
Sbjct: 7 aacattcattgttgtcggtgggttgtgagga-ggcagccagacccaccgggggatgaatg 65
Query: 61 tcac 64
||||
Sbjct: 66 tcac 69
>32767_rno-mir-181d:mirbase
Length = 83
Score = 87.7 bits (44), Expect = 8e-19
Identities = 60/64 (93%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttgtgaggacggaggccagacccaccgagggatgaatg 60
||||||||||||||||||||||||||||||| | || |||||||||||| ||||||||||
Sbjct: 11 aacattcattgttgtcggtgggttgtgagga-gaagaccagacccaccgggggatgaatg 69
Query: 61 tcac 64
||||
Sbjct: 70 tcac 73
>33249_bta-mir-181d:mirbase
Length = 113
Score = 83.8 bits (42), Expect = 1e-17
Identities = 59/64 (92%), Gaps = 3/64 (4%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttgtgaggacggaggccagacccaccgagggatgaatg 60
|||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||
Sbjct: 35 aacattcattgttgtcggtgggttgt---gacagagaccagacccaccgagggatgaatg 91
Query: 61 tcac 64
||||
Sbjct: 92 tcac 95
>25806_xtr-mir-181b-2:mirbase
Length = 83
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttgt 26
||||||||||| ||||||||||||||
Sbjct: 14 aacattcattgctgtcggtgggttgt 39
>25805_xtr-mir-181b-1:mirbase
Length = 83
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttg 25
||||||||||| |||||||||||||
Sbjct: 13 aacattcattgctgtcggtgggttg 37
>26733_cfa-mir-181b-1:mirbase
Length = 62
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttg 25
||||||||||| |||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggttg 25
>27579_lla-mir-181b:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttg 25
||||||||||| |||||||||||||
Sbjct: 36 aacattcattgctgtcggtgggttg 60
>27769_mml-mir-181b-1:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttg 25
||||||||||| |||||||||||||
Sbjct: 36 aacattcattgctgtcggtgggttg 60
>28223_mne-mir-181b:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttg 25
||||||||||| |||||||||||||
Sbjct: 36 aacattcattgctgtcggtgggttg 60
>28315_ggo-mir-181b:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttg 25
||||||||||| |||||||||||||
Sbjct: 36 aacattcattgctgtcggtgggttg 60
>28485_hsa-mir-181b-1:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttg 25
||||||||||| |||||||||||||
Sbjct: 36 aacattcattgctgtcggtgggttg 60
>30104_ppa-mir-181b:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttg 25
||||||||||| |||||||||||||
Sbjct: 36 aacattcattgctgtcggtgggttg 60
>30253_ptr-mir-181b-1:mirbase
Length = 108
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttg 25
||||||||||| |||||||||||||
Sbjct: 36 aacattcattgctgtcggtgggttg 60
>30867_ppy-mir-181b:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttg 25
||||||||||| |||||||||||||
Sbjct: 36 aacattcattgctgtcggtgggttg 60
>31894_mmu-mir-181b-1:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttg 25
||||||||||| |||||||||||||
Sbjct: 12 aacattcattgctgtcggtgggttg 36
>32764_rno-mir-181b-1:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttg 25
||||||||||| |||||||||||||
Sbjct: 36 aacattcattgctgtcggtgggttg 60
>33246_bta-mir-181b-1:mirbase
Length = 110
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttg 25
||||||||||| |||||||||||||
Sbjct: 36 aacattcattgctgtcggtgggttg 60
>34008_ssc-mir-181b-1:mirbase
Length = 80
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttg 25
||||||||||| |||||||||||||
Sbjct: 11 aacattcattgctgtcggtgggttg 35
>25976_gga-mir-181b-1:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 15 aacattcattgctgtcggtgggtt 38
>25977_gga-mir-181b-2:mirbase
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggtt 39
>26485_tgu-mir-181b-1:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 11 aacattcattgctgtcggtgggtt 34
>26486_tgu-mir-181b-2:mirbase
Length = 74
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 11 aacattcattgctgtcggtgggtt 34
>26734_cfa-mir-181b-2:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 1 aacattcattgctgtcggtgggtt 24
>27062_eca-mir-181b:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggtt 39
>27404_mdo-mir-181b:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 13 aacattcattgctgtcggtgggtt 36
>27770_mml-mir-181b-2:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggtt 39
>28486_hsa-mir-181b-2:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggtt 39
>30254_ptr-mir-181b-2:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 15 aacattcattgctgtcggtgggtt 38
>30868_ppy-mir-181b-2:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggtt 39
>31511_oan-mir-181b:mirbase
Length = 110
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 27 aacattcattgctgtcggtgggtt 50
>31512_oan-mir-181c:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggttgtga 28
|||||||||| ||||||||||||||||
Sbjct: 19 aacattcattactgtcggtgggttgtga 46
>31895_mmu-mir-181b-2:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggtt 39
>32765_rno-mir-181b-2:mirbase
Length = 88
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 15 aacattcattgctgtcggtgggtt 38
>33247_bta-mir-181b-2:mirbase
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggtt 39
>34009_ssc-mir-181b-2:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 13 aacattcattgctgtcggtgggtt 36
>34330_dre-mir-181b-1:mirbase
Length = 109
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 37 aacattcattgctgtcggtgggtt 60
>34331_dre-mir-181b-2:mirbase
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 16 aacattcattgctgtcggtgggtt 39
>34612_fru-mir-181b-1:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 14 aacattcattgctgtcggtgggtt 37
>34613_fru-mir-181b-2:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 11 aacattcattgctgtcggtgggtt 34
>34759_tni-mir-181b-1:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 14 aacattcattgctgtcggtgggtt 37
>34760_tni-mir-181b-2:mirbase
Length = 75
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 aacattcattgttgtcggtgggtt 24
||||||||||| ||||||||||||
Sbjct: 11 aacattcattgctgtcggtgggtt 34
>34332_dre-mir-181c:mirbase
Length = 78
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 acattcattgttgtcggtgggtt 24
|||||||||| ||||||||||||
Sbjct: 13 acattcattgctgtcggtgggtt 35
