miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00697;mir-186;AAGU02261059.1/4229-4143 9785:Loxodonta africana
(African savanna elephant)
Length = 87
Score = 121 bits (61), Expect = 1e-27
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 caaagaattctccttttgggctttctgattttattttaagcccaaaggtgaattttttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 caaagaattctccttttgggctttctgattttattttaagcccaaaggtgaattttttgg 75
Query: 61 g 61
|
Sbjct: 76 g 76
>RF00697;mir-186;ABRQ01113918.1/782-866 9813:Procavia capensis
(cape rock hyrax)
Length = 85
Score = 121 bits (61), Expect = 1e-27
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 caaagaattctccttttgggctttctgattttattttaagcccaaaggtgaattttttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 caaagaattctccttttgggctttctgattttattttaagcccaaaggtgaattttttgg 74
Query: 61 g 61
|
Sbjct: 75 g 75
>RF00697;mir-186;ABRO01098600.1/541-624 10020:Dipodomys ordii
(Ord's kangaroo rat)
Length = 84
Score = 77.8 bits (39), Expect = 1e-14
Identities = 56/61 (91%), Gaps = 3/61 (4%)
Strand = Plus / Plus
Query: 1 caaagaattctccttttgggctttctgattttattttaagcccaaaggtgaattttttgg 60
||||||||||||||||||||||||||| || | |||||||||||||||||||||||||
Sbjct: 16 caaagaattctccttttgggctttctgctt---tattaagcccaaaggtgaattttttgg 72
Query: 61 g 61
|
Sbjct: 73 g 73
>RF00697;mir-186;AAFR03042129.1/13240-13326 13616:Monodelphis
domestica (gray short-tailed opossum)
Length = 87
Score = 75.8 bits (38), Expect = 5e-14
Identities = 58/62 (93%), Gaps = 2/62 (3%)
Strand = Plus / Plus
Query: 1 caaagaattctccttttgggctttctgatt-ttattttaagcccaaaggtgaattttttg 59
|||||||||||||||||||||||| ||||| ||| ||| |||||||||||||||||||||
Sbjct: 16 caaagaattctccttttgggcttt-tgattcttaatttcagcccaaaggtgaattttttg 74
Query: 60 gg 61
||
Sbjct: 75 gg 76
>RF00697;mir-186;AAPN01067101.1/12973-13059 9258:Ornithorhynchus
anatinus (platypus)
Length = 87
Score = 52.0 bits (26), Expect = 7e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 caaagaattctccttttgggctttct 26
||||||||||||||||||||||||||
Sbjct: 16 caaagaattctccttttgggctttct 41
