miRNEST 2.0, an integrative microRNA resource :: BLAST
>27093_eca-mir-208a:mirbase
Length = 83
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 7 gagcttttggctcgggttatacctgatgctcacgtataagacgagcaaaaagcttgttgg 66
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaagcttgttgg 74
Query: 67 tca 69
|||
Sbjct: 75 tca 77
>27804_mml-mir-208a:mirbase
Length = 71
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 7 gagcttttggctcgggttatacctgatgctcacgtataagacgagcaaaaagcttgttgg 66
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaagcttgttgg 68
Query: 67 tca 69
|||
Sbjct: 69 tca 71
>28526_hsa-mir-208a:mirbase
Length = 71
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 7 gagcttttggctcgggttatacctgatgctcacgtataagacgagcaaaaagcttgttgg 66
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaagcttgttgg 68
Query: 67 tca 69
|||
Sbjct: 69 tca 71
>30903_ppy-mir-208a:mirbase
Length = 71
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 7 gagcttttggctcgggttatacctgatgctcacgtataagacgagcaaaaagcttgttgg 66
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaagcttgttgg 68
Query: 67 tca 69
|||
Sbjct: 69 tca 71
>33285_bta-mir-208a:mirbase
Length = 71
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 7 gagcttttggctcgggttatacctgatgctcacgtataagacgagcaaaaagcttgttgg 66
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaagcttgttgg 68
Query: 67 tca 69
|||
Sbjct: 69 tca 71
>30285_ptr-mir-208a:mirbase
Length = 70
Score = 115 bits (58), Expect = 4e-27
Identities = 61/62 (98%)
Strand = Plus / Plus
Query: 7 gagcttttggctcgggttatacctgatgctcacgtataagacgagcaaaaagcttgttgg 66
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 gagcttttggcccgggttatacctgatgctcacgtataagacgagcaaaaagcttgttgg 68
Query: 67 tc 68
||
Sbjct: 69 tc 70
>31934_mmu-mir-208a:mirbase
Length = 83
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 6 tgagcttttggctcgggttatacctgatgctcacgtataagacgagcaaaaagcttgttg 65
|||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 14 tgagcttttggcccgggttatacctgacactcacgtataagacgagcaaaaagcttgttg 73
Query: 66 gtca 69
||||
Sbjct: 74 gtca 77
>31935_mmu-mir-208a:mirbase
Length = 83
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 6 tgagcttttggctcgggttatacctgatgctcacgtataagacgagcaaaaagcttgttg 65
|||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 14 tgagcttttggcccgggttatacctgacactcacgtataagacgagcaaaaagcttgttg 73
Query: 66 gtca 69
||||
Sbjct: 74 gtca 77
>32798_rno-mir-208:mirbase
Length = 83
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 6 tgagcttttggctcgggttatacctgatgctcacgtataagacgagcaaaaagcttgttg 65
|||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 14 tgagcttttggcccgggttatacctgactctcacgtataagacgagcaaaaagcttgttg 73
Query: 66 gtca 69
||||
Sbjct: 74 gtca 77
>33033_rno-mir-3546:mirbase
Length = 116
Score = 103 bits (52), Expect = 2e-23
Identities = 61/64 (95%)
Strand = Plus / Minus
Query: 6 tgagcttttggctcgggttatacctgatgctcacgtataagacgagcaaaaagcttgttg 65
|||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 86 tgagcttttggcccgggttatacctgactctcacgtataagacgagcaaaaagcttgttg 27
Query: 66 gtca 69
||||
Sbjct: 26 gtca 23
>27425_mdo-mir-208:mirbase
Length = 77
Score = 69.9 bits (35), Expect = 2e-13
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 6 tgagcttttggctcgggttatacctgatgctcacgtataagacgagcaaaaagcttgttg 65
||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 14 tgagcttttggtccgggttatacctgatgcatgtgtataagacgagcaaaaagctcgttg 73
Query: 66 gtc 68
|||
Sbjct: 74 gtc 76
>31533_oan-mir-208:mirbase
Length = 111
Score = 67.9 bits (34), Expect = 8e-13
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 8 agcttttggctcgggttatacctgatgctcacgtataagacgagcaaaaagcttgttggt 67
|||||||||| | | |||||||||| || |||||||||||||||||||||||||||||
Sbjct: 35 agcttttggcccagattatacctgacattcccgtataagacgagcaaaaagcttgttggt 94
Query: 68 ca 69
||
Sbjct: 95 ca 96
>25830_xtr-mir-208:mirbase
Length = 81
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 40 gtataagacgagcaaaaagcttgtt 64
|||||||||||||| ||||||||||
Sbjct: 48 gtataagacgagcataaagcttgtt 72
