miRNEST 2.0, an integrative microRNA resource :: BLAST
>27807_mml-mir-211:mirbase
Length = 109
Score = 159 bits (80), Expect = 5e-40
Identities = 95/100 (95%)
Strand = Plus / Plus
Query: 1 ctggccatgtgacttgtgggcttccctttgtcatcctttgcctagggttctgagaggggc 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 4 ctggccatgtgacttgtgggcttccctttgtcatcctttgcctagggctctgagcagggc 63
Query: 61 agggacagcaaaggggtgctcagttgtcacctctcacagc 100
|||||||||||||||||||||||||||||| || ||||||
Sbjct: 64 agggacagcaaaggggtgctcagttgtcacttcccacagc 103
>28235_mne-mir-211:mirbase
Length = 109
Score = 151 bits (76), Expect = 1e-37
Identities = 94/100 (94%)
Strand = Plus / Plus
Query: 1 ctggccatgtgacttgtgggcttccctttgtcatcctttgcctagggttctgagaggggc 60
|||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||
Sbjct: 4 ctggccatgtgacttgtgggcttccctttgtcatccttcgcctagggctctgagcagggc 63
Query: 61 agggacagcaaaggggtgctcagttgtcacctctcacagc 100
|||||||||||||||||||||||||||||| || ||||||
Sbjct: 64 agggacagcaaaggggtgctcagttgtcacttcccacagc 103
>28529_hsa-mir-211:mirbase
Length = 110
Score = 151 bits (76), Expect = 1e-37
Identities = 94/100 (94%)
Strand = Plus / Plus
Query: 1 ctggccatgtgacttgtgggcttccctttgtcatcctttgcctagggttctgagaggggc 60
|||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||
Sbjct: 5 ctggccatgtgacttgtgggcttccctttgtcatccttcgcctagggctctgagcagggc 64
Query: 61 agggacagcaaaggggtgctcagttgtcacctctcacagc 100
|||||||||||||||||||||||||||||| || ||||||
Sbjct: 65 agggacagcaaaggggtgctcagttgtcacttcccacagc 104
>30288_ptr-mir-211:mirbase
Length = 109
Score = 151 bits (76), Expect = 1e-37
Identities = 94/100 (94%)
Strand = Plus / Plus
Query: 1 ctggccatgtgacttgtgggcttccctttgtcatcctttgcctagggttctgagaggggc 60
|||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||
Sbjct: 5 ctggccatgtgacttgtgggcttccctttgtcatccttcgcctagggctctgagcagggc 64
Query: 61 agggacagcaaaggggtgctcagttgtcacctctcacagc 100
|||||||||||||||||||||||||||||| || ||||||
Sbjct: 65 agggacagcaaaggggtgctcagttgtcacttcccacagc 104
>27095_eca-mir-211:mirbase
Length = 87
Score = 149 bits (75), Expect = 4e-37
Identities = 84/87 (96%)
Strand = Plus / Plus
Query: 8 tgtgacttgtgggcttccctttgtcatcctttgcctagggttctgagaggggcagggaca 67
|||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 1 tgtgacttgtgggcttccctttgtcatcctttgcctagggctctgagtggggcagggact 60
Query: 68 gcaaaggggtgctcagttgtcacctct 94
|||||||||||||||||||||||||||
Sbjct: 61 gcaaaggggtgctcagttgtcacctct 87
>33288_bta-mir-211:mirbase
Length = 110
Score = 145 bits (73), Expect = 7e-36
Identities = 88/93 (94%)
Strand = Plus / Plus
Query: 8 tgtgacttgtgggcttccctttgtcatcctttgcctagggttctgagaggggcagggaca 67
|||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 12 tgtgacctgtgggcttccctttgtcatcctttgcccagggttctgagtggggcagggaca 71
Query: 68 gcaaaggggtgctcagttgtcacctctcacagc 100
||||||||||||||||| |||||||| ||||||
Sbjct: 72 gcaaaggggtgctcagtcgtcacctcccacagc 104
>30906_ppy-mir-211:mirbase
Length = 110
Score = 137 bits (69), Expect = 2e-33
Identities = 90/97 (92%)
Strand = Plus / Plus
Query: 4 gccatgtgacttgtgggcttccctttgtcatcctttgcctagggttctgagaggggcagg 63
|||||||||||||||| |||||||||||||||||| |||||||| |||||| |||||||
Sbjct: 8 gccatgtgacttgtggacttccctttgtcatccttcgcctagggctctgagcagggcagg 67
Query: 64 gacagcaaaggggtgctcagttgtcacctctcacagc 100
||||||||||||||||||||||||||| || ||||||
Sbjct: 68 gacagcaaaggggtgctcagttgtcacttcccacagc 104
>31938_mmu-mir-211:mirbase
Length = 106
Score = 109 bits (55), Expect = 4e-25
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 8 tgtgacttgtgggcttccctttgtcatcctttgcctagggttctgagaggggcagggaca 67
|||||| |||||||||||||||||||||||||||||||| |||||| | |||| |||||
Sbjct: 12 tgtgacctgtgggcttccctttgtcatcctttgcctaggcctctgagtgaggcaaggaca 71
Query: 68 gcaaaggggtgctcagttgtcacctct 94
||||||||| ||||||| |||||||||
Sbjct: 72 gcaaaggggggctcagtggtcacctct 98
>32802_rno-mir-211:mirbase
Length = 106
Score = 109 bits (55), Expect = 4e-25
Identities = 79/87 (90%)
Strand = Plus / Plus
Query: 8 tgtgacttgtgggcttccctttgtcatcctttgcctagggttctgagaggggcagggaca 67
|||||| | |||||||||||||||||||||||||||||| |||||| |||||| |||||
Sbjct: 12 tgtgacctctgggcttccctttgtcatcctttgcctaggcctctgagtggggcaaggaca 71
Query: 68 gcaaaggggtgctcagttgtcacctct 94
||||||||| ||||||| |||||||||
Sbjct: 72 gcaaaggggggctcagtggtcacctct 98
>27422_mdo-mir-204:mirbase
Length = 97
Score = 83.8 bits (42), Expect = 2e-17
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 7 atgtgacttgtgggcttccctttgtcatcctttgcctagggttctgagaggggcagggac 66
||||||| ||||||||||||||||||||||| ||||| | || ||| |||||||||||
Sbjct: 10 atgtgacctgtgggcttccctttgtcatcctatgcctggaaatcagagtggggcagggac 69
Query: 67 agcaaaggggtgctcagttgtc 88
||||||||| ||||||| ||||
Sbjct: 70 agcaaagggatgctcagctgtc 91
>25996_gga-mir-204-2:mirbase
Length = 101
Score = 73.8 bits (37), Expect = 2e-14
Identities = 70/81 (86%)
Strand = Plus / Plus
Query: 8 tgtgacttgtgggcttccctttgtcatcctttgcctagggttctgagaggggcagggaca 67
|||||| ||||||||||||||||||||||| ||||| | | || || | ||||||||||
Sbjct: 13 tgtgacctgtgggcttccctttgtcatcctatgcctggagatcacagtgaggcagggaca 72
Query: 68 gcaaaggggtgctcagttgtc 88
|||||||| ||||||| ||||
Sbjct: 73 gcaaagggatgctcagctgtc 93
>34632_fru-mir-204:mirbase
Length = 92
Score = 71.9 bits (36), Expect = 8e-14
Identities = 73/84 (86%), Gaps = 1/84 (1%)
Strand = Plus / Plus
Query: 8 tgtgacttgtgggcttccctttgtcatcctttgcctagggttctgagaggggcagggaca 67
|||||| ||||||||||||||||||||||| ||||| | | || || | ||||||||||
Sbjct: 1 tgtgacctgtgggcttccctttgtcatcctatgcctggagctcggata-aggcagggaca 59
Query: 68 gcaaaggggtgctcagttgtcacc 91
|||||||| ||||||| |||||||
Sbjct: 60 gcaaagggatgctcagctgtcacc 83
>26504_tgu-mir-204-2:mirbase
Length = 72
Score = 65.9 bits (33), Expect = 5e-12
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 15 tgtgggcttccctttgtcatcctttgcctagggttctgagaggggcagggacagcaaagg 74
||||||||||||||||||||||| ||||| | | || || | |||||||||||||||||
Sbjct: 4 tgtgggcttccctttgtcatcctatgcctggagatcacagtgaggcagggacagcaaagg 63
Query: 75 ggtgctcag 83
| |||||||
Sbjct: 64 gatgctcag 72
>34779_tni-mir-204a:mirbase
Length = 93
Score = 63.9 bits (32), Expect = 2e-11
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 8 tgtgacttgtgggcttccctttgtcatcctttgcctagggttctgagaggggcagggaca 67
|||||| ||||||||||||||||||||||| ||||| | | || || | ||||||||||
Sbjct: 1 tgtgacctgtgggcttccctttgtcatcctatgcctggagctcggata-aggcagggaca 59
Query: 68 gcaaaggggtgctcag 83
|||||||| |||||||
Sbjct: 60 gcaaagggatgctcag 75
>25825_xtr-mir-204-1:mirbase
Length = 105
Score = 61.9 bits (31), Expect = 8e-11
Identities = 69/79 (87%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 17 tgggcttccctttgtcatcctttgcct-agggttctgagaggggcagggacagcaaaggg 75
||||||||||||||||||||| ||||| || | ||| ||| ||||||||||||||||||
Sbjct: 26 tgggcttccctttgtcatcctatgcctgagaatgctg-gagaggcagggacagcaaaggg 84
Query: 76 gtgctcagttgtcacctct 94
||||||| ||| ||||||
Sbjct: 85 atgctcagatgttacctct 103
>25826_xtr-mir-204-2:mirbase
Length = 88
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 7 atgtgacttgtgggcttccctttgtcatcctttgcct 43
||||||| ||||||||||||||||||||||| |||||
Sbjct: 1 atgtgacctgtgggcttccctttgtcatcctatgcct 37
>27624_sla-mir-204:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 catgtgacttgtgggcttccctttgtcatcctttgcct 43
||||||||| |||| ||||||||||||||||| |||||
Sbjct: 17 catgtgactcgtggacttccctttgtcatcctatgcct 54
>27801_mml-mir-204:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 catgtgacttgtgggcttccctttgtcatcctttgcct 43
||||||||| |||| ||||||||||||||||| |||||
Sbjct: 17 catgtgactcgtggacttccctttgtcatcctatgcct 54
>28232_mne-mir-204:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 catgtgacttgtgggcttccctttgtcatcctttgcct 43
||||||||| |||| ||||||||||||||||| |||||
Sbjct: 17 catgtgactcgtggacttccctttgtcatcctatgcct 54
>28328_ggo-mir-204:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 catgtgacttgtgggcttccctttgtcatcctttgcct 43
||||||||| |||| ||||||||||||||||| |||||
Sbjct: 17 catgtgactcgtggacttccctttgtcatcctatgcct 54
>28523_hsa-mir-204:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 catgtgacttgtgggcttccctttgtcatcctttgcct 43
||||||||| |||| ||||||||||||||||| |||||
Sbjct: 17 catgtgactcgtggacttccctttgtcatcctatgcct 54
>30116_ppa-mir-204:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 catgtgacttgtgggcttccctttgtcatcctttgcct 43
||||||||| |||| ||||||||||||||||| |||||
Sbjct: 17 catgtgactcgtggacttccctttgtcatcctatgcct 54
>30282_ptr-mir-204:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 catgtgacttgtgggcttccctttgtcatcctttgcct 43
||||||||| |||| ||||||||||||||||| |||||
Sbjct: 17 catgtgactcgtggacttccctttgtcatcctatgcct 54
>30900_ppy-mir-204:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 catgtgacttgtgggcttccctttgtcatcctttgcct 43
||||||||| |||| ||||||||||||||||| |||||
Sbjct: 17 catgtgactcgtggacttccctttgtcatcctatgcct 54
>32794_rno-mir-204:mirbase
Length = 110
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 catgtgacttgtgggcttccctttgtcatcctttgcct 43
||||||||| |||| ||||||||||||||||| |||||
Sbjct: 17 catgtgactcgtggacttccctttgtcatcctatgcct 54
>33282_bta-mir-204:mirbase
Length = 96
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 catgtgacttgtgggcttccctttgtcatcctttgcct 43
||||||||| |||| ||||||||||||||||| |||||
Sbjct: 7 catgtgactcgtggacttccctttgtcatcctatgcct 44
>34034_ssc-mir-204:mirbase
Length = 109
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 catgtgacttgtgggcttccctttgtcatcctttgcct 43
||||||||| |||| ||||||||||||||||| |||||
Sbjct: 16 catgtgactcgtggacttccctttgtcatcctatgcct 53
>34361_dre-mir-204-1:mirbase
Length = 93
Score = 52.0 bits (26), Expect = 8e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 6 catgtgacttgtgggcttccctttgtcatcctttgcct 43
|||||||| ||||| ||||||||||||||||| |||||
Sbjct: 2 catgtgacctgtggacttccctttgtcatcctatgcct 39
>25995_gga-mir-204-1:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 6 catgtgacttgtgggcttccctttgtcatcctttgcct 43
|||||||| |||| ||||||||||||||||| |||||
Sbjct: 17 catgtgacccgtggacttccctttgtcatcctatgcct 54
>26000_gga-mir-211:mirbase
Length = 74
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 tgtgggcttccctttgtcatcctttgcct 43
|||| |||||||||||||||||| |||||
Sbjct: 3 tgtgagcttccctttgtcatcctatgcct 31
>26505_tgu-mir-204-3:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 tgtgggcttccctttgtcatcctttgcct 43
|||| |||||||||||||||||| |||||
Sbjct: 4 tgtgagcttccctttgtcatcctatgcct 32
>26506_tgu-mir-204-4:mirbase
Length = 92
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 15 tgtgggcttccctttgtcatcctttgcct 43
|||| |||||||||||||||||| |||||
Sbjct: 4 tgtgagcttccctttgtcatcctatgcct 32
>26503_tgu-mir-204-1:mirbase
Length = 72
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 16 gtgggcttccctttgtcatcctttgcct 43
|||| ||||||||||||||||| |||||
Sbjct: 5 gtggacttccctttgtcatcctatgcct 32
>26507_tgu-mir-204-5:mirbase
Length = 60
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gcttccctttgtcatcctttgcct 43
|||||||||||||||||| |||||
Sbjct: 1 gcttccctttgtcatcctatgcct 24
>31530_oan-mir-204:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 20 gcttccctttgtcatcctttgcct 43
|||||||||||||||||| |||||
Sbjct: 29 gcttccctttgtcatcctatgcct 52
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 56 ggggcagggacagcaaaggg 75
||||||||||||||||||||
Sbjct: 65 ggggcagggacagcaaaggg 84
