miRNEST 2.0, an integrative microRNA resource :: BLAST
>27100_eca-mir-216b:mirbase
Length = 86
Score = 121 bits (61), Expect = 6e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 73
Query: 61 t 61
|
Sbjct: 74 t 74
>33293_bta-mir-216b:mirbase
Length = 82
Score = 121 bits (61), Expect = 6e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 1 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 70
Query: 61 t 61
|
Sbjct: 71 t 71
>27812_mml-mir-216b:mirbase
Length = 82
Score = 113 bits (57), Expect = 1e-26
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 1 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 11 aaatctctgcaggcaaatgtgatgtcactgaagaaatcacacacttacccgtagagattc 70
Query: 61 t 61
|
Sbjct: 71 t 71
>30910_ppy-mir-216b:mirbase
Length = 82
Score = 113 bits (57), Expect = 1e-26
Identities = 60/61 (98%)
Strand = Plus / Plus
Query: 1 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 11 aaatctctgcaggcaaatgtgatgtcactgaagaaatcacacacttacccgtagagattc 70
Query: 61 t 61
|
Sbjct: 71 t 71
>27306_eca-mir-1461:mirbase
Length = 56
Score = 111 bits (56), Expect = 5e-26
Identities = 56/56 (100%)
Strand = Plus / Minus
Query: 3 atctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagat 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagat 1
>28534_hsa-mir-216b:mirbase
Length = 82
Score = 105 bits (53), Expect = 3e-24
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 1 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 60
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 11 aaatctctgcaggcaaatgtgatgtcactgaggaaatcacacacttacccgtagagattc 70
Query: 61 t 61
|
Sbjct: 71 t 71
>30292_ptr-mir-216b:mirbase
Length = 81
Score = 105 bits (53), Expect = 3e-24
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 1 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 60
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 11 aaatctctgcaggcaaatgtgatgtcactgaggaaatcacacacttacccgtagagattc 70
Query: 61 t 61
|
Sbjct: 71 t 71
>31944_mmu-mir-216b:mirbase
Length = 86
Score = 97.6 bits (49), Expect = 8e-22
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 1 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 60
||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||||||
Sbjct: 14 aaatctctgcaggcaaatgtgatgtcactgaagaaaccacacacttacctgtagagattc 73
Query: 61 t 61
|
Sbjct: 74 t 74
>32807_rno-mir-216b:mirbase
Length = 102
Score = 97.6 bits (49), Expect = 8e-22
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 1 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 60
||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 20 aaatctctgcaggcaaatgtgatgtcactgaagaaatcacacacttacttgtagagattc 79
Query: 61 t 61
|
Sbjct: 80 t 80
>32808_rno-mir-216b:mirbase
Length = 102
Score = 97.6 bits (49), Expect = 8e-22
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 1 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 60
||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 20 aaatctctgcaggcaaatgtgatgtcactgaagaaatcacacacttacttgtagagattc 79
Query: 61 t 61
|
Sbjct: 80 t 80
>26004_gga-mir-216b:mirbase
Length = 89
Score = 65.9 bits (33), Expect = 3e-12
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 1 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 60
|||||||||||||||||||||||||| || || |||| |||| ||||| ||||||||||
Sbjct: 16 aaatctctgcaggcaaatgtgatgtctttatagcaatctcacaattacctgtagagattc 75
Query: 61 t 61
|
Sbjct: 76 t 76
>26005_gga-mir-216c:mirbase
Length = 86
Score = 65.9 bits (33), Expect = 3e-12
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 1 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 60
|||||||||||||||||||||||||| || || |||| |||| ||||| ||||||||||
Sbjct: 72 aaatctctgcaggcaaatgtgatgtctttatagcaatctcacaattacctgtagagattc 13
Query: 61 t 61
|
Sbjct: 12 t 12
>26512_tgu-mir-216b:mirbase
Length = 71
Score = 58.0 bits (29), Expect = 7e-10
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 1 aaatctctgcaggcaaatgtgatgtcactaaagaaatcacacacttacccgtagagattc 60
|||||||||||||||| ||||||||| || || |||| |||| ||||| ||||||||||
Sbjct: 11 aaatctctgcaggcaagtgtgatgtctttatagcaatctcacaattacctgtagagattc 70
Query: 61 t 61
|
Sbjct: 71 t 71
>25334_csa-mir-216b:mirbase
Length = 81
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2 aatctctgcaggcaaatgtgatgtca 27
||||||||||||||| ||||||||||
Sbjct: 17 aatctctgcaggcaactgtgatgtca 42
>34371_dre-mir-216b-1:mirbase
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 aatctctgcaggcaaatgtgatgt 25
||||||||||||||| ||||||||
Sbjct: 12 aatctctgcaggcaactgtgatgt 35
>34372_dre-mir-216b-2:mirbase
Length = 76
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 2 aatctctgcaggcaaatgtgatgt 25
||||||||||||||| ||||||||
Sbjct: 11 aatctctgcaggcaactgtgatgt 34
>34638_fru-mir-216b:mirbase
Length = 77
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 aatctctgcaggcaaatgtgatg 24
||||||||||||||| |||||||
Sbjct: 10 aatctctgcaggcaactgtgatg 32
>34786_tni-mir-216b:mirbase
Length = 77
Score = 38.2 bits (19), Expect = 6e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 2 aatctctgcaggcaaatgtgatg 24
||||||||||||||| |||||||
Sbjct: 10 aatctctgcaggcaactgtgatg 32
