miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST 


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00641;mir-154;ABRQ01054376.1/1652-1731 9813:Procavia capensis
          (cape rock hyrax)
          Length = 80

 Score =  113 bits (57), Expect = 2e-25
 Identities = 57/57 (100%)
 Strand = Plus / Plus

                                                                   
Query: 1  aagttgttcgtggtggattcgctttacttatgacgaatcattcacggacaacacttt 57
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 aagttgttcgtggtggattcgctttacttatgacgaatcattcacggacaacacttt 70





>RF00641;mir-154;ABRQ01054375.1/598-677 9813:Procavia capensis
          (cape rock hyrax)
          Length = 80

 Score = 42.1 bits (21), Expect = 7e-04
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                           
Query: 18 ttcgctttacttatgacgaatcattcacggaca 50
          ||||||||| |||||||||||||| || |||||
Sbjct: 31 ttcgctttatttatgacgaatcatacagggaca 63