miRNEST 2.0, an integrative microRNA resource :: BLAST
>27907_mml-mir-449a:mirbase
Length = 91
Score = 145 bits (73), Expect = 6e-36
Identities = 85/89 (95%)
Strand = Plus / Plus
Query: 3 gtgtgtgatgggttggcagtgtattgttagctggttgaatatatgaatggcatcagctaa 62
|||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 3 gtgtgtgatgagctggcagtgtattgttagctggttgaatatgtgaatggcatcagctaa 62
Query: 63 catgcaactgctatcttattgcatataca 91
|||||||||||| ||||||||||||||||
Sbjct: 63 catgcaactgctgtcttattgcatataca 91
>33377_bta-mir-449a:mirbase
Length = 88
Score = 141 bits (71), Expect = 1e-34
Identities = 80/83 (96%)
Strand = Plus / Plus
Query: 4 tgtgtgatgggttggcagtgtattgttagctggttgaatatatgaatggcatcagctaac 63
||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||
Sbjct: 1 tgtgtgatgggttggcagtgtattgttagctggttgaatatgtgagtgccatcagctaac 60
Query: 64 atgcaactgctatcttattgcat 86
|||||||||||||||||||||||
Sbjct: 61 atgcaactgctatcttattgcat 83
>28654_hsa-mir-449a:mirbase
Length = 91
Score = 137 bits (69), Expect = 2e-33
Identities = 84/89 (94%)
Strand = Plus / Plus
Query: 3 gtgtgtgatgggttggcagtgtattgttagctggttgaatatatgaatggcatcagctaa 62
|||||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 3 gtgtgtgatgagctggcagtgtattgttagctggttgaatatgtgaatggcatcggctaa 62
Query: 63 catgcaactgctatcttattgcatataca 91
|||||||||||| ||||||||||||||||
Sbjct: 63 catgcaactgctgtcttattgcatataca 91
>30377_ptr-mir-449a:mirbase
Length = 90
Score = 129 bits (65), Expect = 4e-31
Identities = 83/89 (93%)
Strand = Plus / Plus
Query: 3 gtgtgtgatgggttggcagtgtattgttagctggttgaatatatgaatggcatcagctaa 62
|||||||||| | ||||||||||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 2 gtgtgtgatgagctggcagtgtattgttagctcgttgaatatgtgaatggcatcggctaa 61
Query: 63 catgcaactgctatcttattgcatataca 91
|||||||||||| ||||||||||||||||
Sbjct: 62 catgcaactgctgtcttattgcatataca 90
>31008_ppy-mir-449a:mirbase
Length = 91
Score = 129 bits (65), Expect = 4e-31
Identities = 83/89 (93%)
Strand = Plus / Plus
Query: 3 gtgtgtgatgggttggcagtgtattgttagctggttgaatatatgaatggcatcagctaa 62
|||||||||| | ||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 3 gtgtgtgatgagctggcagtgtattgttagctggttgaatatgtgaatggcatcggctaa 62
Query: 63 catgcaactgctatcttattgcatataca 91
| |||||||||| ||||||||||||||||
Sbjct: 63 cgtgcaactgctgtcttattgcatataca 91
>27181_eca-mir-449a:mirbase
Length = 60
Score = 111 bits (56), Expect = 9e-26
Identities = 59/60 (98%)
Strand = Plus / Plus
Query: 16 tggcagtgtattgttagctggttgaatatatgaatggcatcagctaacatgcaactgcta 75
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 tggcagtgtattgttagctggttgaatatatgaatggcatcagctaacaagcaactgcta 60
>32915_rno-mir-449a:mirbase
Length = 91
Score = 105 bits (53), Expect = 5e-24
Identities = 80/89 (89%)
Strand = Plus / Plus
Query: 3 gtgtgtgatgggttggcagtgtattgttagctggttgaatatatgaatggcatcagctaa 62
||||| |||||||||||||||||||||||||||||||| ||| | || |||| |||||||
Sbjct: 3 gtgtgcgatgggttggcagtgtattgttagctggttgagtatgtaaaaggcaccagctaa 62
Query: 63 catgcaactgctatcttattgcatataca 91
|||||||||||| || ||||||| |||||
Sbjct: 63 catgcaactgctctcctattgcacataca 91
>32077_mmu-mir-449a:mirbase
Length = 91
Score = 93.7 bits (47), Expect = 2e-20
Identities = 74/83 (89%)
Strand = Plus / Plus
Query: 3 gtgtgtgatgggttggcagtgtattgttagctggttgaatatatgaatggcatcagctaa 62
||||||||||| |||||||||||||||||||||||||| ||| ||| |||| |||||||
Sbjct: 3 gtgtgtgatggcttggcagtgtattgttagctggttgagtatgtgagcggcaccagctaa 62
Query: 63 catgcaactgctatcttattgca 85
||||| |||||| || |||||||
Sbjct: 63 catgcgactgctctcctattgca 85
>27451_mdo-mir-449:mirbase
Length = 79
Score = 75.8 bits (38), Expect = 5e-15
Identities = 66/73 (90%), Gaps = 3/73 (4%)
Strand = Plus / Plus
Query: 6 tgtgatgggttggcagtgtattgttagctggttgaatatatgaatg-gcatcagctaaca 64
||||||||| ||||||||||||||||||||||||| ||| |||| | || |||||||||
Sbjct: 1 tgtgatgggatggcagtgtattgttagctggttgactatctgaacgtgc--cagctaaca 58
Query: 65 tgcaactgctatc 77
|||||||||||||
Sbjct: 59 tgcaactgctatc 71
>31553_oan-mir-449a:mirbase
Length = 115
Score = 56.0 bits (28), Expect = 4e-09
Identities = 62/72 (86%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 15 ttggcagtgtattgttagctggttgaatatatgaatggcatcagctaacatgcaactgct 74
|||||||||| ||||||||||||||||||| | ||||||| ||||| ||| || |||||
Sbjct: 28 ttggcagtgt-ttgttagctggttgaatatttaaatggcaccagctgacagacagctgct 86
Query: 75 atcttattgcat 86
|| ||||||||
Sbjct: 87 ttcctattgcat 98
>27908_mml-mir-449b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcagtgtattgttagctgg 36
||||||||||||||||||||
Sbjct: 17 ggcagtgtattgttagctgg 36
>28655_hsa-mir-449b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcagtgtattgttagctgg 36
||||||||||||||||||||
Sbjct: 17 ggcagtgtattgttagctgg 36
>30378_ptr-mir-449b:mirbase
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcagtgtattgttagctgg 36
||||||||||||||||||||
Sbjct: 16 ggcagtgtattgttagctgg 35
>31009_ppy-mir-449b:mirbase
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcagtgtattgttagctgg 36
||||||||||||||||||||
Sbjct: 17 ggcagtgtattgttagctgg 36
>33378_bta-mir-449b:mirbase
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 17 ggcagtgtattgttagctgg 36
||||||||||||||||||||
Sbjct: 17 ggcagtgtattgttagctgg 36
