miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>32919_rno-mir-451:mirbase
Length = 72
Score = 117 bits (59), Expect = 1e-27
Identities = 62/63 (98%)
Strand = Plus / Plus
Query: 1 ttggggatggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttgggaatggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 61
Query: 61 ctg 63
|||
Sbjct: 62 ctg 64
>28661_hsa-mir-451:mirbase
Length = 72
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 ttggggatggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 60
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 61
Query: 61 ctgtaccca 69
|| ||||||
Sbjct: 62 ctataccca 70
>30382_ptr-mir-451:mirbase
Length = 71
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 ttggggatggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 60
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 60
Query: 61 ctgtaccca 69
|| ||||||
Sbjct: 61 ctataccca 69
>31014_ppy-mir-451:mirbase
Length = 72
Score = 113 bits (57), Expect = 2e-26
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 1 ttggggatggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 60
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 61
Query: 61 ctgtaccca 69
|| ||||||
Sbjct: 62 ctataccca 70
>28662_hsa-mir-451b:mirbase
Length = 68
Score = 111 bits (56), Expect = 6e-26
Identities = 65/68 (95%)
Strand = Plus / Minus
Query: 2 tggggatggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgc 61
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 tgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgc 9
Query: 62 tgtaccca 69
| ||||||
Sbjct: 8 tataccca 1
>32084_mmu-mir-451:mirbase
Length = 72
Score = 109 bits (55), Expect = 2e-25
Identities = 61/63 (96%)
Strand = Plus / Plus
Query: 1 ttggggatggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 60
||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2 ttgggaatggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttg 61
Query: 61 ctg 63
|||
Sbjct: 62 ctg 64
>33383_bta-mir-451:mirbase
Length = 71
Score = 107 bits (54), Expect = 1e-24
Identities = 60/62 (96%)
Strand = Plus / Plus
Query: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgctgtacc 67
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctcttgctgcacc 67
Query: 68 ca 69
||
Sbjct: 68 ca 69
>27185_eca-mir-451:mirbase
Length = 72
Score = 105 bits (53), Expect = 4e-24
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 ttggggatggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 60
||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 2 ttgggaatgtcgaggaaaccgttaccattactgtgtttagtaatggtaacggttctcttg 61
Query: 61 ctgtaccca 69
|||||||||
Sbjct: 62 ctgtaccca 70
>27913_mml-mir-451:mirbase
Length = 72
Score = 99.6 bits (50), Expect = 2e-22
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 1 ttggggatggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttg 60
||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 2 ttgggaatggcaaggaaaccgttaccattactgagtttagtaatggtaagggttctcttg 61
Query: 61 ct 62
||
Sbjct: 62 ct 63
>34102_ssc-mir-451:mirbase
Length = 65
Score = 97.6 bits (49), Expect = 9e-22
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 3 ggggatggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgct 62
|||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1 gggggtggcgagcaaaccgttaccattactgagtttagtaatggtaacggttctcttgct 60
Query: 63 g 63
|
Sbjct: 61 g 61
>31556_oan-mir-451:mirbase
Length = 85
Score = 95.6 bits (48), Expect = 4e-21
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctcttgctg 63
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 16 tggcgaggaaaccgttaccattactgagtttagtaatggtaacggttctctggctg 71
>25862_xtr-mir-451:mirbase
Length = 62
Score = 81.8 bits (41), Expect = 6e-17
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 15 gaaaccgttaccattactgagtttagtaatggtaatggttctcttgctg 63
||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 11 gaaaccgttaccattactgagtttagtaatggtaagggttctgttgctg 59
>26532_tgu-mir-451:mirbase
Length = 73
Score = 79.8 bits (40), Expect = 2e-16
Identities = 46/48 (95%)
Strand = Plus / Plus
Query: 9 ggcgaggaaaccgttaccattactgagtttagtaatggtaatggttct 56
|||| |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 4 ggcggggaaaccgttaccattactgagtttagtaatggtaacggttct 51
>26030_gga-mir-451:mirbase
Length = 69
Score = 77.8 bits (39), Expect = 9e-16
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 14 ggaaaccgttaccattactgagtttagtaatggtaatggttct 56
|||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 16 ggaaaccgttaccattactgagtttagtaatggtaacggttct 58
>27452_mdo-mir-451:mirbase
Length = 62
Score = 75.8 bits (38), Expect = 3e-15
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 8 tggcgaggaaaccgttaccattactgagtttagtaatggtaatggttctc 57
||||| |||||||||||||||||||| ||||||||||||||| |||||||
Sbjct: 2 tggcggggaaaccgttaccattactgtgtttagtaatggtaagggttctc 51
>34473_dre-mir-451:mirbase
Length = 60
Score = 75.8 bits (38), Expect = 3e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 15 gaaaccgttaccattactgagtttagtaatggtaatggttct 56
||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 10 gaaaccgttaccattactgagtttagtaatggtaagggttct 51
>25551_pma-mir-451:mirbase
Length = 74
Score = 38.2 bits (19), Expect = 7e-04
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 41 taatggtaatggttctcttgctg 63
||||||||| |||||||||||||
Sbjct: 43 taatggtaagggttctcttgctg 65
