miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33386_bta-mir-454:mirbase
Length = 114
Score = 139 bits (70), Expect = 3e-34
Identities = 70/70 (100%)
Strand = Plus / Plus
Query: 1 agaaccctatcgatattgtctctgctgtgtaaatagctctgagtagtgcaatattgctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20 agaaccctatcgatattgtctctgctgtgtaaatagctctgagtagtgcaatattgctta 79
Query: 61 tagggttttg 70
||||||||||
Sbjct: 80 tagggttttg 89
>27187_eca-mir-454:mirbase
Length = 69
Score = 129 bits (65), Expect = 3e-31
Identities = 68/69 (98%)
Strand = Plus / Plus
Query: 1 agaaccctatcgatattgtctctgctgtgtaaatagctctgagtagtgcaatattgctta 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1 agaaccctatcgatattgtctctgctgtgtaaatcgctctgagtagtgcaatattgctta 60
Query: 61 tagggtttt 69
|||||||||
Sbjct: 61 tagggtttt 69
>31557_oan-mir-454:mirbase
Length = 94
Score = 127 bits (64), Expect = 1e-30
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 2 gaaccctatcgatattgtctctgctgtgtaaatagctctgagtagtgcaatattgcttat 61
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 14 gaaccctatcgatattgtctctgctgtgtaaatagctgtgagtagtgcaatattgcttat 73
Query: 62 agggtttt 69
||||||||
Sbjct: 74 agggtttt 81
>27916_mml-mir-454:mirbase
Length = 115
Score = 123 bits (62), Expect = 2e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 1 agaaccctatcgatattgtctctgctgtgtaaatagctctgagtagtgcaatattgctta 60
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 21 agaaccctatcaatattgtctctgctgtgtaaatagttctgagtagtgcaatattgctta 80
Query: 61 tagggttttg 70
||||||||||
Sbjct: 81 tagggttttg 90
>28664_hsa-mir-454:mirbase
Length = 115
Score = 123 bits (62), Expect = 2e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 1 agaaccctatcgatattgtctctgctgtgtaaatagctctgagtagtgcaatattgctta 60
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 21 agaaccctatcaatattgtctctgctgtgtaaatagttctgagtagtgcaatattgctta 80
Query: 61 tagggttttg 70
||||||||||
Sbjct: 81 tagggttttg 90
>30385_ptr-mir-454:mirbase
Length = 114
Score = 123 bits (62), Expect = 2e-29
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 1 agaaccctatcgatattgtctctgctgtgtaaatagctctgagtagtgcaatattgctta 60
||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 21 agaaccctatcaatattgtctctgctgtgtaaatagttctgagtagtgcaatattgctta 80
Query: 61 tagggttttg 70
||||||||||
Sbjct: 81 tagggttttg 90
>34475_dre-mir-454b:mirbase
Length = 116
Score = 52.0 bits (26), Expect = 5e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 41 gagtagtgcaatattgcttatagggt 66
||||||||||||||||||||||||||
Sbjct: 63 gagtagtgcaatattgcttatagggt 88
>26031_gga-mir-454:mirbase
Length = 121
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 42 agtagtgcaatattgcttatagggt 66
|||||||||||||||||||||||||
Sbjct: 70 agtagtgcaatattgcttatagggt 94
>26533_tgu-mir-454:mirbase
Length = 73
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 42 agtagtgcaatattgcttatagggt 66
|||||||||||||||||||||||||
Sbjct: 39 agtagtgcaatattgcttatagggt 63
>34474_dre-mir-454a:mirbase
Length = 124
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 41 gagtagtgcaatattgcttatagggtttt 69
|||||||||||||||||| ||||||||||
Sbjct: 74 gagtagtgcaatattgctaatagggtttt 102
