miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>27917_mml-mir-455:mirbase
Length = 96
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 73
>27918_mml-mir-455:mirbase
Length = 96
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 73
>28665_hsa-mir-455:mirbase
Length = 96
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 73
>28666_hsa-mir-455:mirbase
Length = 96
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 73
>30386_ptr-mir-455:mirbase
Length = 95
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 72
>31017_ppy-mir-455:mirbase
Length = 96
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 73
>31018_ppy-mir-455:mirbase
Length = 96
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 73
>33387_bta-mir-455:mirbase
Length = 89
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 73
>34103_ssc-mir-455:mirbase
Length = 80
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 69
>25863_xtr-mir-455:mirbase
Length = 87
Score = 107 bits (54), Expect = 8e-25
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 73
>26032_gga-mir-455:mirbase
Length = 86
Score = 107 bits (54), Expect = 8e-25
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 73
>26033_gga-mir-455:mirbase
Length = 86
Score = 107 bits (54), Expect = 8e-25
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 73
>26534_tgu-mir-455:mirbase
Length = 71
Score = 107 bits (54), Expect = 8e-25
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 tatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 61
>34476_dre-mir-455:mirbase
Length = 96
Score = 107 bits (54), Expect = 8e-25
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 73
>34653_fru-mir-455:mirbase
Length = 84
Score = 107 bits (54), Expect = 8e-25
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 72
>34801_tni-mir-455:mirbase
Length = 84
Score = 107 bits (54), Expect = 8e-25
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 tatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 72
>27453_mdo-mir-455:mirbase
Length = 87
Score = 99.6 bits (50), Expect = 2e-22
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 16 tatgtgcccttggactacatcgtggaagccaacaccatgcagtccatgggcatataca 73
>34477_dre-mir-455b:mirbase
Length = 105
Score = 91.7 bits (46), Expect = 5e-20
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 24 tatgtgcccttggactacattgtggaggccagcaccatgcagtccatgggcatataca 81
>32920_rno-mir-455:mirbase
Length = 78
Score = 83.8 bits (42), Expect = 1e-17
Identities = 55/58 (94%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
|||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||
Sbjct: 11 tatgtgcctttggactacatcgtggacg-cagcaccatgcagtccacgggcatataca 67
>32088_mmu-mir-455:mirbase
Length = 82
Score = 75.8 bits (38), Expect = 3e-15
Identities = 54/58 (93%), Gaps = 1/58 (1%)
Strand = Plus / Plus
Query: 1 tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
|||||||||||||||||||||||| | || |||||||||||||||| |||||||||||
Sbjct: 17 tatgtgcctttggactacatcgtgaacgc-agcaccatgcagtccacgggcatataca 73
