miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00709;mir-455;BAAE01039051.1/1207-1292 8090:Oryzias latipes
          (Japanese medaka)
          Length = 86

 Score =  107 bits (54), Expect = 1e-23
 Identities = 57/58 (98%)
 Strand = Plus / Plus

                                                                    
Query: 1  tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
          |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 tatgtgcccttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 73




>RF00709;mir-455;ABVD01508152.1/1180-1265 9358:Choloepus hoffmanni
          (Hoffmann's two-fingered sloth)
          Length = 86

 Score = 67.9 bits (34), Expect = 1e-11
 Identities = 53/58 (91%), Gaps = 1/58 (1%)
 Strand = Plus / Plus

                                                                    
Query: 1  tatgtgcctttggactacatcgtggaagccagcaccatgcagtccatgggcatataca 58
          |||||| ||||||||||||||||| ||||||||||||||| |||| || |||||||||
Sbjct: 16 tatgtgtctttggactacatcgtg-aagccagcaccatgctgtccgtgagcatataca 72