miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33388_bta-mir-483:mirbase
Length = 68
Score = 52.0 bits (26), Expect = 5e-08
Identities = 54/62 (87%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 1 gaggacgggaggaaaggaggacgtggtttcatgcaggtcctcactcctcccctcccgtct 60
|||| ||||| ||||||||| |||||| | ||||| |||||||||||| ||||||||||
Sbjct: 4 gagggcgggaagaaaggagggcgtggtctg-tgcagctcctcactcctctcctcccgtct 62
Query: 61 tc 62
||
Sbjct: 63 tc 64
>32172_mmu-mir-483:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 39 cctcactcctcccctcccgtctt 61
|||||||||||||||||||||||
Sbjct: 43 cctcactcctcccctcccgtctt 65
>32928_rno-mir-483:mirbase
Length = 73
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 39 cctcactcctcccctcccgtctt 61
|||||||||||||||||||||||
Sbjct: 43 cctcactcctcccctcccgtctt 65
>28668_hsa-mir-483:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 38 tcctcactcctcccctcccgtcttc 62
|||||||||||| ||||||||||||
Sbjct: 45 tcctcactcctctcctcccgtcttc 69
>28669_hsa-mir-483:mirbase
Length = 76
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 38 tcctcactcctcccctcccgtcttc 62
|||||||||||| ||||||||||||
Sbjct: 45 tcctcactcctctcctcccgtcttc 69
