miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>33393_bta-mir-487b:mirbase
Length = 84
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 72
>33854_oar-mir-487b:mirbase
Length = 106
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 81
>33855_oar-mir-487b:mirbase
Length = 106
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 81
>34107_ssc-mir-487b:mirbase
Length = 78
Score = 115 bits (58), Expect = 3e-27
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 68
>28676_hsa-mir-487b:mirbase
Length = 84
Score = 107 bits (54), Expect = 8e-25
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 58
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 15 gtggttatccctgtcctgttcgttttgctcatgtcgaatcgtacagggtcatccactt 72
>30391_ptr-mir-487b:mirbase
Length = 83
Score = 107 bits (54), Expect = 8e-25
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 58
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 14 gtggttatccctgtcctgttcgttttgctcatgtcgaatcgtacagggtcatccactt 71
>31024_ppy-mir-487b:mirbase
Length = 84
Score = 107 bits (54), Expect = 8e-25
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 1 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 58
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 15 gtggttatccctgtcctgttcgttttgctcatgtcgaatcgtacagggtcatccactt 72
>27925_mml-mir-487b:mirbase
Length = 84
Score = 99.6 bits (50), Expect = 2e-22
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 1 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 58
|||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 15 gtggttatccctgtcctgttcgttttgctcgtgtcgaatcgtacagggtcatccactt 72
>27193_eca-mir-487b:mirbase
Length = 84
Score = 91.7 bits (46), Expect = 5e-20
Identities = 55/58 (94%)
Strand = Plus / Plus
Query: 1 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 58
||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||
Sbjct: 15 gtggttatccctgtcctgttcgttttaattacgtcgaatcgtacagggtcatccactt 72
>32176_mmu-mir-487b:mirbase
Length = 82
Score = 83.8 bits (42), Expect = 1e-17
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 1 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 58
||||||||||||||||| |||| || ||||||| ||||||||||||||||||||||||
Sbjct: 14 gtggttatccctgtcctcttcgcttcactcatgccgaatcgtacagggtcatccactt 71
>32931_rno-mir-487b:mirbase
Length = 82
Score = 75.8 bits (38), Expect = 3e-15
Identities = 53/58 (91%)
Strand = Plus / Plus
Query: 1 gtggttatccctgtcctgttcgttttactcatgtcgaatcgtacagggtcatccactt 58
||||||||||||||||| |||| || ||| ||| ||||||||||||||||||||||||
Sbjct: 14 gtggttatccctgtcctcttcgcttcacttatgccgaatcgtacagggtcatccactt 71
